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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9421 O_BomoMG26505_complete:A_BomoMG_comp41161_c0_seq1
187bp
9422 O_BomoMG26506_complete:A_BomoMG_comp41161_c0_seq1
145bp
9423 O_BomoMG26508_complete:A_BomoMG_comp41161_c0_seq2
909bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
9424 O_BomoMG26509_complete:A_BomoMG_comp41161_c0_seq2
427bp
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0006313 P transposition, DNA-mediated
GO:0008270 F zinc ion binding
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0046872 F metal ion binding
9425 O_BomoMG2650_internal:A_BomoMG_comp22135_c0_seq2
283bp
 PREDICTED:_probable_ATP-dependent_RNA_helicase_DHX34_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006396 P RNA processing
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:2000623 P negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
9426 O_BomoMG26510_complete:A_BomoMG_comp41161_c0_seq2
187bp
9427 O_BomoMG26511_complete:A_BomoMG_comp41161_c0_seq2
145bp
9428 O_BomoMG26515_complete:A_BomoMG_comp41162_c0_seq2
987bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
9429 O_BomoMG26522_complete:A_BomoMG_comp41162_c0_seq3
183bp
9430 O_BomoMG26523_3prime_partial:A_BomoMG_comp41162_c0_seq3
107bp
9431 O_BomoMG26525_complete:A_BomoMG_comp41162_c0_seq6
415bp
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
9432 O_BomoMG26528_complete:A_BomoMG_comp41162_c0_seq8
183bp
9433 O_BomoMG26529_3prime_partial:A_BomoMG_comp41162_c0_seq8
107bp
9434 O_BomoMG2652_complete:A_BomoMG_comp22137_c0_seq1
428bp
 autophagy_related_protein_Atg6_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0003674 F molecular_function
GO:0006897 P endocytosis
GO:0006914 P autophagy
GO:0006979 P response to oxidative stress
GO:0006995 P cellular response to nitrogen starvation
GO:0009267 P cellular response to starvation
GO:0009306 P protein secretion
GO:0016023 C cytoplasmic vesicle
GO:0016322 P neuron remodeling
GO:0030097 P hemopoiesis
GO:0032258 P cytoplasm to vacuole transport by the Cvt pathway
GO:0034271 C phosphatidylinositol 3-kinase complex, class III, type I
GO:0034272 C phosphatidylinositol 3-kinase complex, class III, type II
GO:0035071 P salivary gland cell autophagic cell death
GO:0035096 P larval midgut cell programmed cell death
GO:0044804 P autophagy of nucleus
GO:0045324 P late endosome to vacuole transport
GO:0045824 P negative regulation of innate immune response
GO:0048102 P autophagic cell death
GO:0050829 P defense response to Gram-negative bacterium
GO:0061723 P glycophagy
9435 O_BomoMG26531_complete:A_BomoMG_comp41162_c0_seq9
987bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
9436 O_BomoMG26532_complete:A_BomoMG_comp41162_c0_seq9
183bp
9437 O_BomoMG26536_3prime_partial:A_BomoMG_comp41162_c0_seq9
107bp
9438 O_BomoMG26541_complete:A_BomoMG_comp41162_c0_seq10
415bp
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
9439 O_BomoMG26542_complete:A_BomoMG_comp41162_c0_seq10
183bp
9440 O_BomoMG26544_3prime_partial:A_BomoMG_comp41162_c0_seq10
107bp
9441 O_BomoMG26546_complete:A_BomoMG_comp41162_c0_seq11
987bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
9442 O_BomoMG26553_complete:A_BomoMG_comp41162_c0_seq12
415bp
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
9443 O_BomoMG26555_complete:A_BomoMG_comp41162_c0_seq13
415bp
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
9444 O_BomoMG26557_complete:A_BomoMG_comp41162_c0_seq15
987bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
9445 O_BomoMG2655_3prime_partial:A_BomoMG_comp22138_c0_seq1
175bp
 PREDICTED:_cyclin-T1_[Papilio_polytes]
GO:0000307 C cyclin-dependent protein kinase holoenzyme complex
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0008024 C cyclin/CDK positive transcription elongation factor complex
GO:0016032 P viral process
GO:0016538 F cyclin-dependent protein serine/threonine kinase regulator activity
GO:0017069 F snRNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045737 P positive regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051301 P cell division
GO:0097322 F 7SK snRNA binding
GO:1900364 P negative regulation of mRNA polyadenylation
GO:1901409 P positive regulation of phosphorylation of RNA polymerase II C-terminal domain
9446 O_BomoMG26567_complete:A_BomoMG_comp41165_c0_seq1
1337bp
GO:0001105 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007367 P segment polarity determination
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016055 P Wnt signaling pathway
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0045944 P positive regulation of transcription by RNA polymerase II
9447 O_BomoMG2656_internal:A_BomoMG_comp22140_c0_seq1
572bp
 PREDICTED:_DNA_topoisomerase_3-alpha_[Amyelois_transitella]
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003916 F DNA topoisomerase activity
GO:0003917 F DNA topoisomerase type I (single strand cut, ATP-independent) activity
GO:0005634 C nucleus
GO:0006265 P DNA topological change
GO:0007059 P chromosome segregation
GO:0016853 F isomerase activity
GO:0044822 F RNA binding
9448 O_BomoMG26573_5prime_partial:A_BomoMG_comp41182_c0_seq1
343bp
GO:0004620 F phospholipase activity
GO:0004806 F triglyceride lipase activity
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006629 P lipid metabolic process
GO:0009395 P phospholipid catabolic process
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0019376 P galactolipid catabolic process
GO:0046872 F metal ion binding
GO:0047372 F acylglycerol lipase activity
GO:0047714 F galactolipase activity
GO:0052689 F carboxylic ester hydrolase activity
9449 O_BomoMG26576_5prime_partial:A_BomoMG_comp41209_c0_seq1
180bp
9450 O_BomoMG26578_complete:A_BomoMG_comp41218_c0_seq1
228bp
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