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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9391 O_BomoMG26448_complete:A_BomoMG_comp41158_c1_seq52
322bp
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0030140 C trans-Golgi network transport vesicle
GO:0042609 F CD4 receptor binding
9392 O_BomoMG26451_complete:A_BomoMG_comp41158_c1_seq54
322bp
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0030140 C trans-Golgi network transport vesicle
GO:0042609 F CD4 receptor binding
9393 O_BomoMG26453_5prime_partial:A_BomoMG_comp41158_c1_seq55
176bp
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
9394 O_BomoMG26455_complete:A_BomoMG_comp41158_c1_seq56
322bp
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0030140 C trans-Golgi network transport vesicle
GO:0042609 F CD4 receptor binding
9395 O_BomoMG26458_5prime_partial:A_BomoMG_comp41158_c1_seq58
176bp
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
9396 O_BomoMG26460_complete:A_BomoMG_comp41158_c1_seq59
322bp
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0030140 C trans-Golgi network transport vesicle
GO:0042609 F CD4 receptor binding
9397 O_BomoMG26462_complete:A_BomoMG_comp41158_c1_seq60
322bp
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0030140 C trans-Golgi network transport vesicle
GO:0042609 F CD4 receptor binding
9398 O_BomoMG26464_complete:A_BomoMG_comp41158_c1_seq61
322bp
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0030140 C trans-Golgi network transport vesicle
GO:0042609 F CD4 receptor binding
9399 O_BomoMG26466_5prime_partial:A_BomoMG_comp41158_c1_seq62
176bp
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
9400 O_BomoMG26469_complete:A_BomoMG_comp41158_c1_seq64
322bp
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0030140 C trans-Golgi network transport vesicle
GO:0042609 F CD4 receptor binding
9401 O_BomoMG2646_5prime_partial:A_BomoMG_comp22127_c0_seq2
411bp
 PREDICTED:_DNA_primase_small_subunit_[Bombyx_mori]
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003896 F DNA primase activity
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005658 C alpha DNA polymerase:primase complex
GO:0006260 P DNA replication
GO:0006269 P DNA replication, synthesis of RNA primer
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0022008 P neurogenesis
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:1990077 C primosome complex
9402 O_BomoMG26472_complete:A_BomoMG_comp41158_c1_seq66
322bp
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0030140 C trans-Golgi network transport vesicle
GO:0042609 F CD4 receptor binding
9403 O_BomoMG26475_5prime_partial:A_BomoMG_comp41158_c1_seq68
176bp
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
9404 O_BomoMG26477_5prime_partial:A_BomoMG_comp41158_c1_seq69
176bp
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
9405 O_BomoMG26479_5prime_partial:A_BomoMG_comp41158_c1_seq70
176bp
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
9406 O_BomoMG2647_5prime_partial:A_BomoMG_comp22130_c0_seq1
246bp
 PREDICTED:_isoleucine--tRNA_ligase,_mitochondrial_isoform_X1_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004822 F isoleucine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006428 P isoleucyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0008270 F zinc ion binding
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
9407 O_BomoMG26481_complete:A_BomoMG_comp41159_c0_seq1
508bp
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0019137 F thioglucosidase activity
GO:0046872 F metal ion binding
9408 O_BomoMG26483_complete:A_BomoMG_comp41159_c0_seq2
210bp
GO:0000166 F nucleotide binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0050873 P brown fat cell differentiation
9409 O_BomoMG26484_5prime_partial:A_BomoMG_comp41159_c0_seq2
145bp
9410 O_BomoMG26486_5prime_partial:A_BomoMG_comp41159_c0_seq4
236bp
9411 O_BomoMG26487_complete:A_BomoMG_comp41159_c0_seq4
210bp
GO:0000166 F nucleotide binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0050873 P brown fat cell differentiation
9412 O_BomoMG26488_complete:A_BomoMG_comp41159_c0_seq5
210bp
GO:0000166 F nucleotide binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0050873 P brown fat cell differentiation
9413 O_BomoMG26489_3prime_partial:A_BomoMG_comp41159_c0_seq6
1159bp
9414 O_BomoMG2648_internal:A_BomoMG_comp22135_c0_seq1
465bp
 PREDICTED:_probable_ATP-dependent_RNA_helicase_DHX34_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006396 P RNA processing
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:2000623 P negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
9415 O_BomoMG26490_5prime_partial:A_BomoMG_comp41159_c0_seq6
520bp
9416 O_BomoMG26494_3prime_partial:A_BomoMG_comp41159_c0_seq7
1159bp
9417 O_BomoMG26496_5prime_partial:A_BomoMG_comp41159_c0_seq7
145bp
9418 O_BomoMG26500_3prime_partial:A_BomoMG_comp41160_c4_seq2
419bp
GO:0001664 F G protein-coupled receptor binding
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0070062 C extracellular exosome
9419 O_BomoMG26503_complete:A_BomoMG_comp41161_c0_seq1
909bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
9420 O_BomoMG26504_complete:A_BomoMG_comp41161_c0_seq1
547bp
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0006313 P transposition, DNA-mediated
GO:0008270 F zinc ion binding
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0046872 F metal ion binding
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