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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
931 O_BomoMG11424_complete:A_BomoMG_comp38706_c0_seq2
564bp
 PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_25-like_isoform_X1_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0002805 P regulation of antimicrobial peptide biosynthetic process
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007399 P nervous system development
GO:0016592 C mediator complex
932 O_BomoMG11426_complete:A_BomoMG_comp38706_c0_seq3
690bp
 PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_25-like_isoform_X1_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0002805 P regulation of antimicrobial peptide biosynthetic process
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007399 P nervous system development
GO:0016592 C mediator complex
933 O_BomoMG11428_complete:A_BomoMG_comp38706_c0_seq4
543bp
 PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_25-like_isoform_X4_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0002805 P regulation of antimicrobial peptide biosynthetic process
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007399 P nervous system development
GO:0016592 C mediator complex
934 O_BomoMG11430_complete:A_BomoMG_comp38707_c0_seq1
294bp
 PREDICTED:_uncharacterized_protein_LOC101735678_[Bombyx_mori]
GO:0003231 P cardiac ventricle development
GO:0005739 C mitochondrion
GO:0005886 C plasma membrane
GO:0014704 C intercalated disc
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:1903779 P regulation of cardiac conduction
935 O_BomoMG11431_complete:A_BomoMG_comp38707_c0_seq2
110bp
 PREDICTED:_uncharacterized_protein_LOC101735678_[Bombyx_mori]
GO:0003231 P cardiac ventricle development
GO:0005739 C mitochondrion
GO:0005886 C plasma membrane
GO:0014704 C intercalated disc
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:1903779 P regulation of cardiac conduction
936 O_BomoMG11432_5prime_partial:A_BomoMG_comp38709_c0_seq1
203bp
 PREDICTED:_G-protein_coupled_receptor_Mth2-like_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0006950 P response to stress
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
937 O_BomoMG11433_complete:A_BomoMG_comp38709_c0_seq2
216bp
 PREDICTED:_G-protein_coupled_receptor_Mth2-like_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0006950 P response to stress
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
938 O_BomoMG11434_internal:A_BomoMG_comp38709_c0_seq3
445bp
 PREDICTED:_G-protein_coupled_receptor_Mth2-like_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0006950 P response to stress
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
939 O_BomoMG11436_internal:A_BomoMG_comp38711_c0_seq1
251bp
 PREDICTED:_histone_deacetylase_5_[Bombyx_mori]
GO:0000118 C histone deacetylase complex
GO:0004407 F histone deacetylase activity
GO:0005634 C nucleus
GO:0006325 P chromatin organization
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006954 P inflammatory response
GO:0007399 P nervous system development
GO:0008134 F transcription factor binding
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0030183 P B cell differentiation
GO:0032041 F NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0042113 P B cell activation
GO:0045843 P negative regulation of striated muscle tissue development
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0070932 P histone H3 deacetylation
940 O_BomoMG11437_internal:A_BomoMG_comp38711_c0_seq2
256bp
 PREDICTED:_histone_deacetylase_5_[Bombyx_mori]
GO:0000118 C histone deacetylase complex
GO:0004407 F histone deacetylase activity
GO:0005634 C nucleus
GO:0006325 P chromatin organization
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006954 P inflammatory response
GO:0007399 P nervous system development
GO:0008134 F transcription factor binding
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0030183 P B cell differentiation
GO:0032041 F NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0042113 P B cell activation
GO:0045843 P negative regulation of striated muscle tissue development
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0070932 P histone H3 deacetylation
941 O_BomoMG11438_complete:A_BomoMG_comp38712_c0_seq2
338bp
 PREDICTED:_gamma-soluble_NSF_attachment_protein_[Papilio_xuthus]
GO:0005483 F soluble NSF attachment protein activity
GO:0005739 C mitochondrion
GO:0005765 C lysosomal membrane
GO:0005774 C vacuolar membrane
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0019905 F syntaxin binding
GO:0031201 C SNARE complex
GO:0043209 C myelin sheath
GO:0061025 P membrane fusion
GO:0070062 C extracellular exosome
942 O_BomoMG11440_internal:A_BomoMG_comp38714_c0_seq1
212bp
 PREDICTED:_transcriptional_adapter_2A_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016573 P histone acetylation
GO:0035066 P positive regulation of histone acetylation
GO:0042789 P mRNA transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0070461 C SAGA-type complex
943 O_BomoMG11441_internal:A_BomoMG_comp38714_c1_seq1
187bp
 Transcriptional_adapter_2-alpha_[Operophtera_brumata]
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016573 P histone acetylation
GO:0035066 P positive regulation of histone acetylation
GO:0042789 P mRNA transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0070461 C SAGA-type complex
944 O_BomoMG11442_internal:A_BomoMG_comp38715_c0_seq1
164bp
 PREDICTED:_uncharacterized_protein_LOC101739152_isoform_X3_[Bombyx_mori]
945 O_BomoMG11444_complete:A_BomoMG_comp38717_c0_seq1
348bp
 PREDICTED:_protein_odd-skipped_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007350 P blastoderm segmentation
GO:0007366 P periodic partitioning by pair rule gene
GO:0007389 P pattern specification process
GO:0007443 P Malpighian tubule morphogenesis
GO:0016348 P imaginal disc-derived leg joint morphogenesis
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
946 O_BomoMG11445_complete:A_BomoMG_comp38717_c0_seq2
724bp
 PREDICTED:_ras-responsive_element-binding_protein_1_[Papilio_polytes]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007362 P terminal region determination
GO:0007366 P periodic partitioning by pair rule gene
GO:0007442 P hindgut morphogenesis
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0009880 P embryonic pattern specification
GO:0010906 P regulation of glucose metabolic process
GO:0016348 P imaginal disc-derived leg joint morphogenesis
GO:0035220 P wing disc development
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046331 P lateral inhibition
GO:0046872 F metal ion binding
GO:0048617 P embryonic foregut morphogenesis
GO:0048619 P embryonic hindgut morphogenesis
947 O_BomoMG11447_5prime_partial:A_BomoMG_comp38718_c2_seq1
213bp
 eukaryotic_translation_initiation_factor_6_[Bombyx_mori]
GO:0000054 P ribosomal subunit export from nucleus
GO:0000460 P maturation of 5.8S rRNA
GO:0000470 P maturation of LSU-rRNA
GO:0003743 F translation initiation factor activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0030687 C preribosome, large subunit precursor
GO:0042254 P ribosome biogenesis
GO:0042256 P mature ribosome assembly
GO:0042273 P ribosomal large subunit biogenesis
GO:0043022 F ribosome binding
GO:0043023 F ribosomal large subunit binding
GO:1902626 P assembly of large subunit precursor of preribosome
948 O_BomoMG11448_5prime_partial:A_BomoMG_comp38720_c0_seq1
283bp
 PREDICTED:_INO80_complex_subunit_B_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0008150 P biological_process
GO:0031011 C Ino80 complex
GO:0046872 F metal ion binding
949 O_BomoMG11450_complete:A_BomoMG_comp38721_c0_seq1
301bp
 PREDICTED:_BTB/POZ_domain-containing_adapter_for_CUL3-mediated_RhoA_degradation_protein_3_[Amyelois_transitella]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0031463 C Cul3-RING ubiquitin ligase complex
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051260 P protein homooligomerization
950 O_BomoMG11451_3prime_partial:A_BomoMG_comp38723_c0_seq2
330bp
 poly(U)-specific_endoribonuclease_homolog_precursor_[Papilio_xuthus]
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004521 F endoribonuclease activity
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0046872 F metal ion binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
951 O_BomoMG11452_3prime_partial:A_BomoMG_comp38723_c0_seq3
165bp
 PREDICTED:_poly(U)-specific_endoribonuclease_homolog_[Papilio_polytes]
952 O_BomoMG11453_complete:A_BomoMG_comp38724_c1_seq1
207bp
 PREDICTED:_protein_phosphatase_PTC7_homolog_[Amyelois_transitella]
GO:0003824 F catalytic activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0005575 C cellular_component
GO:0006470 P protein dephosphorylation
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
953 O_BomoMG11454_complete:A_BomoMG_comp38724_c1_seq2
305bp
 PREDICTED:_protein_phosphatase_PTC7_homolog_[Amyelois_transitella]
GO:0003824 F catalytic activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0005575 C cellular_component
GO:0006470 P protein dephosphorylation
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
954 O_BomoMG11455_3prime_partial:A_BomoMG_comp38727_c0_seq1
243bp
 PREDICTED:_neurogenic_protein_mastermind-like_[Papilio_polytes]
GO:0003007 P heart morphogenesis
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007398 P ectoderm development
GO:0007399 P nervous system development
GO:0007418 P ventral midline development
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007500 P mesodermal cell fate determination
GO:0008356 P asymmetric cell division
GO:0008407 P chaeta morphogenesis
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016607 C nuclear speck
GO:0030154 P cell differentiation
GO:0030707 P ovarian follicle cell development
GO:0030718 P germ-line stem cell population maintenance
GO:0035019 P somatic stem cell population maintenance
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048749 P compound eye development
955 O_BomoMG11457_internal:A_BomoMG_comp38727_c0_seq2
245bp
 PREDICTED:_neurogenic_protein_mastermind-like_isoform_X2_[Papilio_machaon]
956 O_BomoMG11461_3prime_partial:A_BomoMG_comp38729_c0_seq1
114bp
 PREDICTED:_iodotyrosine_dehalogenase_1_[Papilio_xuthus]
957 O_BomoMG11462_complete:A_BomoMG_comp38729_c0_seq2
194bp
 PREDICTED:_iodotyrosine_dehalogenase_1_[Amyelois_transitella]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
958 O_BomoMG11463_3prime_partial:A_BomoMG_comp38730_c0_seq1
440bp
 putative_UBX_domain-containing_protein_1_[Danaus_plexippus]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0070062 C extracellular exosome
959 O_BomoMG11464_complete:A_BomoMG_comp38730_c0_seq1
133bp
 PREDICTED:_uncharacterized_protein_LOC105383915_[Plutella_xylostella]
960 O_BomoMG11465_complete:A_BomoMG_comp38732_c1_seq1
423bp
 PREDICTED:_probable_medium-chain_specific_acyl-CoA_dehydrogenase,_mitochondrial_isoform_X2_[Papilio_xuthus]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005777 C peroxisome
GO:0005811 C lipid droplet
GO:0005875 C microtubule associated complex
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0050660 F flavin adenine dinucleotide binding
GO:0052890 F oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
GO:0070991 F medium-chain-acyl-CoA dehydrogenase activity
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