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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
901 O_BomoMG11379_internal:A_BomoMG_comp38693_c0_seq4
343bp
 PREDICTED:_coiled-coil_domain-containing_protein_R3HCC1L_isoform_X1_[Bombyx_mori]
902 O_BomoMG1137_5prime_partial:A_BomoMG_comp19906_c0_seq1
107bp
 conserved_hypothetical_protein_[Culex_quinquefasciatus]
903 O_BomoMG11382_internal:A_BomoMG_comp38694_c0_seq1
132bp
 hypothetical_protein_KGM_14475_[Danaus_plexippus]
904 O_BomoMG11384_internal:A_BomoMG_comp38694_c0_seq2
137bp
 Uncharacterized_protein_OBRU01_11805_[Operophtera_brumata]
905 O_BomoMG11386_complete:A_BomoMG_comp38695_c0_seq1
577bp
 PREDICTED:_uncharacterized_protein_LOC101741223_[Bombyx_mori]
906 O_BomoMG11388_complete:A_BomoMG_comp38695_c0_seq2
577bp
 PREDICTED:_uncharacterized_protein_LOC101741223_[Bombyx_mori]
907 O_BomoMG11390_3prime_partial:A_BomoMG_comp38697_c0_seq1
169bp
 PREDICTED:_protein_deltex_[Bombyx_mori]
GO:0005112 F Notch binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006897 P endocytosis
GO:0007219 P Notch signaling pathway
GO:0007220 P Notch receptor processing
GO:0008270 F zinc ion binding
GO:0008593 P regulation of Notch signaling pathway
GO:0016055 P Wnt signaling pathway
GO:0016348 P imaginal disc-derived leg joint morphogenesis
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0017124 F SH3 domain binding
GO:0035220 P wing disc development
GO:0045746 P negative regulation of Notch signaling pathway
GO:0045747 P positive regulation of Notch signaling pathway
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
908 O_BomoMG11391_5prime_partial:A_BomoMG_comp38699_c0_seq1
441bp
 PREDICTED:_microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
909 O_BomoMG11392_complete:A_BomoMG_comp38699_c0_seq1
109bp
 hypothetical_protein_[Pseudomonas_sp._NBRC_111123]
910 O_BomoMG11394_3prime_partial:A_BomoMG_comp38699_c0_seq2
150bp
 PREDICTED:_microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
911 O_BomoMG11395_complete:A_BomoMG_comp38699_c0_seq3
272bp
 PREDICTED:_microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
912 O_BomoMG11396_complete:A_BomoMG_comp38699_c0_seq3
109bp
 hypothetical_protein_[Pseudomonas_sp._NBRC_111123]
913 O_BomoMG11397_internal:A_BomoMG_comp38699_c0_seq4
319bp
914 O_BomoMG11398_internal:A_BomoMG_comp38699_c0_seq4
319bp
 PREDICTED:_microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
915 O_BomoMG113_internal:A_BomoMG_comp17213_c0_seq1
318bp
 Protein_fat-free-like_protein_[Operophtera_brumata]
GO:0000938 C GARP complex
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0032456 P endocytic recycling
916 O_BomoMG11400_complete:A_BomoMG_comp38702_c0_seq1
104bp
 PREDICTED:_tRNA-splicing_endonuclease_subunit_Sen34-like_[Plutella_xylostella]
917 O_BomoMG11401_complete:A_BomoMG_comp38702_c0_seq2
204bp
 PREDICTED:_tRNA-splicing_endonuclease_subunit_Sen34_[Papilio_xuthus]
GO:0000213 F tRNA-intron endonuclease activity
GO:0000214 C tRNA-intron endonuclease complex
GO:0000379 P tRNA-type intron splice site recognition and cleavage
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation
GO:0008033 P tRNA processing
GO:0016829 F lyase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
918 O_BomoMG11403_complete:A_BomoMG_comp38702_c0_seq5
174bp
 tRNA-splicing_endonuclease_subunit_Sen34_[Papilio_xuthus]
GO:0000213 F tRNA-intron endonuclease activity
GO:0000214 C tRNA-intron endonuclease complex
GO:0000379 P tRNA-type intron splice site recognition and cleavage
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation
GO:0008033 P tRNA processing
GO:0016829 F lyase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
919 O_BomoMG11406_complete:A_BomoMG_comp38702_c0_seq7
134bp
 PREDICTED:_tRNA-splicing_endonuclease_subunit_Sen34-like_[Plutella_xylostella]
920 O_BomoMG11407_complete:A_BomoMG_comp38702_c0_seq10
134bp
 PREDICTED:_tRNA-splicing_endonuclease_subunit_Sen34-like_[Plutella_xylostella]
921 O_BomoMG11408_complete:A_BomoMG_comp38702_c0_seq11
204bp
 PREDICTED:_tRNA-splicing_endonuclease_subunit_Sen34_[Papilio_xuthus]
GO:0000213 F tRNA-intron endonuclease activity
GO:0000214 C tRNA-intron endonuclease complex
GO:0000379 P tRNA-type intron splice site recognition and cleavage
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation
GO:0008033 P tRNA processing
GO:0016829 F lyase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
922 O_BomoMG1140_complete:A_BomoMG_comp19908_c0_seq1
214bp
 PREDICTED:_transmembrane_protein_70_homolog,_mitochondrial_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031966 C mitochondrial membrane
GO:0032592 C integral component of mitochondrial membrane
GO:0033615 P mitochondrial proton-transporting ATP synthase complex assembly
923 O_BomoMG11410_5prime_partial:A_BomoMG_comp38703_c0_seq2
533bp
 PREDICTED:_WW_domain-containing_adapter_protein_with_coiled-coil_isoform_X2_[Bombyx_mori]
GO:0000993 F RNA polymerase II complex binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0010390 P histone monoubiquitination
GO:0016568 P chromatin organization
GO:0044783 P mitotic G1 DNA damage checkpoint signaling
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0071894 P histone H2B conserved C-terminal lysine ubiquitination
924 O_BomoMG11413_3prime_partial:A_BomoMG_comp38704_c0_seq1
121bp
 PREDICTED:_AT-rich_interactive_domain-containing_protein_4B_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0044212 F transcription cis-regulatory region binding
925 O_BomoMG11414_internal:A_BomoMG_comp38704_c0_seq2
438bp
 PREDICTED:_AT-rich_interactive_domain-containing_protein_4B_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0004407 F histone deacetylase activity
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006349 P regulation of gene expression by genomic imprinting
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007283 P spermatogenesis
GO:0008150 P biological_process
GO:0016575 P histone deacetylation
GO:0034773 P histone H4-K20 trimethylation
GO:0036124 P histone H3-K9 trimethylation
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0097368 P establishment of Sertoli cell barrier
926 O_BomoMG11417_3prime_partial:A_BomoMG_comp38704_c0_seq3
121bp
 PREDICTED:_AT-rich_interactive_domain-containing_protein_4B_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0044212 F transcription cis-regulatory region binding
927 O_BomoMG11418_internal:A_BomoMG_comp38704_c0_seq4
196bp
 PREDICTED:_AT-rich_interactive_domain-containing_protein_4B_[Bombyx_mori]
GO:0003146 P heart jogging
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006412 P translation
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0007417 P central nervous system development
GO:0007507 P heart development
GO:0009303 P rRNA transcription
GO:0010468 P regulation of gene expression
GO:0035118 P embryonic pectoral fin morphogenesis
GO:0048565 P digestive tract development
GO:0048703 P embryonic viscerocranium morphogenesis
GO:0060828 P regulation of canonical Wnt signaling pathway
GO:0071733 P obsolete transcriptional activation by promoter-enhancer looping
928 O_BomoMG1141_internal:A_BomoMG_comp19916_c0_seq1
313bp
 putative_acetyltransferase-like_protein_[Gregarina_niphandrodes]
929 O_BomoMG11421_complete:A_BomoMG_comp38705_c1_seq1
253bp
 aquaporin_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
930 O_BomoMG11422_complete:A_BomoMG_comp38706_c0_seq1
669bp
 PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_25-like_isoform_X4_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0002805 P regulation of antimicrobial peptide biosynthetic process
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007399 P nervous system development
GO:0016592 C mediator complex
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