SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/16985
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8881 O_BomoMG25490_complete:A_BomoMG_comp41118_c1_seq10
269bp
GO:0003824 F catalytic activity
GO:0004731 F purine-nucleoside phosphorylase activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006139 P nucleobase-containing compound metabolic process
GO:0009116 P nucleoside metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016763 F pentosyltransferase activity
GO:0043101 P purine-containing compound salvage
8882 O_BomoMG25493_complete:A_BomoMG_comp41118_c1_seq11
219bp
GO:0006694 P steroid biosynthetic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
8883 O_BomoMG25494_5prime_partial:A_BomoMG_comp41118_c1_seq12
664bp
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0007293 P germarium-derived egg chamber formation
GO:0032007 P negative regulation of TOR signaling
GO:0034198 P cellular response to amino acid starvation
GO:0035859 C Seh1-associated complex
GO:0038202 P TORC1 signaling
GO:0044754 C autolysosome
GO:0045792 P negative regulation of cell size
GO:0048477 P oogenesis
8884 O_BomoMG25498_complete:A_BomoMG_comp41118_c1_seq15
322bp
GO:0003824 F catalytic activity
GO:0004731 F purine-nucleoside phosphorylase activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006139 P nucleobase-containing compound metabolic process
GO:0009116 P nucleoside metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016763 F pentosyltransferase activity
GO:0043101 P purine-containing compound salvage
8885 O_BomoMG25499_complete:A_BomoMG_comp41118_c1_seq17
477bp
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0006629 P lipid metabolic process
GO:0006694 P steroid biosynthetic process
GO:0006701 P progesterone biosynthetic process
GO:0006810 P transport
GO:0006839 P mitochondrial transport
GO:0006869 P lipid transport
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008289 F lipid binding
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031902 C late endosome membrane
8886 O_BomoMG2549_3prime_partial:A_BomoMG_comp21956_c0_seq1
326bp
 PREDICTED:_guanine_nucleotide-binding_protein_subunit_beta-5_[Amyelois_transitella]
GO:0004871 F obsolete signal transducer activity
GO:0005829 C cytosol
GO:0005834 C heterotrimeric G-protein complex
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0031682 F G-protein gamma-subunit binding
GO:0032794 F GTPase activating protein binding
GO:0043234 C protein-containing complex
GO:0044297 C cell body
GO:0051087 F chaperone binding
GO:1901386 P negative regulation of voltage-gated calcium channel activity
8887 O_BomoMG254_3prime_partial:A_BomoMG_comp17565_c0_seq1
239bp
 PREDICTED:_DET1_homolog_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0008150 P biological_process
8888 O_BomoMG25501_complete:A_BomoMG_comp41118_c1_seq20
142bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
8889 O_BomoMG25503_complete:A_BomoMG_comp41118_c1_seq21
101bp
8890 O_BomoMG25504_complete:A_BomoMG_comp41118_c1_seq22
596bp
8891 O_BomoMG25505_complete:A_BomoMG_comp41118_c1_seq23
596bp
8892 O_BomoMG25506_complete:A_BomoMG_comp41118_c1_seq24
328bp
GO:0003824 F catalytic activity
GO:0004731 F purine-nucleoside phosphorylase activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006139 P nucleobase-containing compound metabolic process
GO:0009116 P nucleoside metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016763 F pentosyltransferase activity
GO:0043101 P purine-containing compound salvage
8893 O_BomoMG25507_complete:A_BomoMG_comp41118_c1_seq25
477bp
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0006629 P lipid metabolic process
GO:0006694 P steroid biosynthetic process
GO:0006701 P progesterone biosynthetic process
GO:0006810 P transport
GO:0006839 P mitochondrial transport
GO:0006869 P lipid transport
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008289 F lipid binding
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031902 C late endosome membrane
8894 O_BomoMG25510_5prime_partial:A_BomoMG_comp41118_c1_seq27
664bp
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0007293 P germarium-derived egg chamber formation
GO:0032007 P negative regulation of TOR signaling
GO:0034198 P cellular response to amino acid starvation
GO:0035859 C Seh1-associated complex
GO:0038202 P TORC1 signaling
GO:0044754 C autolysosome
GO:0045792 P negative regulation of cell size
GO:0048477 P oogenesis
8895 O_BomoMG25511_complete:A_BomoMG_comp41118_c1_seq27
477bp
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0006629 P lipid metabolic process
GO:0006694 P steroid biosynthetic process
GO:0006701 P progesterone biosynthetic process
GO:0006810 P transport
GO:0006839 P mitochondrial transport
GO:0006869 P lipid transport
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008289 F lipid binding
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031902 C late endosome membrane
8896 O_BomoMG25513_complete:A_BomoMG_comp41118_c1_seq27
152bp
8897 O_BomoMG25517_internal:A_BomoMG_comp41118_c1_seq28
132bp
8898 O_BomoMG25518_complete:A_BomoMG_comp41118_c1_seq29
315bp
8899 O_BomoMG25519_complete:A_BomoMG_comp41118_c1_seq29
269bp
GO:0003824 F catalytic activity
GO:0004731 F purine-nucleoside phosphorylase activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006139 P nucleobase-containing compound metabolic process
GO:0009116 P nucleoside metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016763 F pentosyltransferase activity
GO:0043101 P purine-containing compound salvage
8900 O_BomoMG25521_5prime_partial:A_BomoMG_comp41118_c1_seq30
664bp
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0007293 P germarium-derived egg chamber formation
GO:0032007 P negative regulation of TOR signaling
GO:0034198 P cellular response to amino acid starvation
GO:0035859 C Seh1-associated complex
GO:0038202 P TORC1 signaling
GO:0044754 C autolysosome
GO:0045792 P negative regulation of cell size
GO:0048477 P oogenesis
8901 O_BomoMG25524_complete:A_BomoMG_comp41118_c1_seq30
142bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
8902 O_BomoMG25525_complete:A_BomoMG_comp41118_c1_seq30
136bp
8903 O_BomoMG25529_complete:A_BomoMG_comp41118_c1_seq31
315bp
8904 O_BomoMG2552_internal:A_BomoMG_comp21959_c1_seq1
289bp
 PREDICTED:_codanin-1_[Bombyx_mori]
8905 O_BomoMG25530_complete:A_BomoMG_comp41118_c1_seq31
269bp
GO:0003824 F catalytic activity
GO:0004731 F purine-nucleoside phosphorylase activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006139 P nucleobase-containing compound metabolic process
GO:0009116 P nucleoside metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016763 F pentosyltransferase activity
GO:0043101 P purine-containing compound salvage
8906 O_BomoMG25532_complete:A_BomoMG_comp41118_c1_seq32
596bp
8907 O_BomoMG25534_complete:A_BomoMG_comp41118_c1_seq32
142bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
8908 O_BomoMG25536_5prime_partial:A_BomoMG_comp41118_c1_seq33
664bp
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0007293 P germarium-derived egg chamber formation
GO:0032007 P negative regulation of TOR signaling
GO:0034198 P cellular response to amino acid starvation
GO:0035859 C Seh1-associated complex
GO:0038202 P TORC1 signaling
GO:0044754 C autolysosome
GO:0045792 P negative regulation of cell size
GO:0048477 P oogenesis
8909 O_BomoMG25538_complete:A_BomoMG_comp41118_c1_seq33
136bp
8910 O_BomoMG25541_complete:A_BomoMG_comp41118_c1_seq35
477bp
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0006629 P lipid metabolic process
GO:0006694 P steroid biosynthetic process
GO:0006701 P progesterone biosynthetic process
GO:0006810 P transport
GO:0006839 P mitochondrial transport
GO:0006869 P lipid transport
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008289 F lipid binding
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031902 C late endosome membrane
previous next from show/16985

- SilkBase 1999-2023 -