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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8851 O_BomoMG25406_internal:A_BomoMG_comp41117_c0_seq2
507bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
8852 O_BomoMG25409_complete:A_BomoMG_comp41117_c0_seq4
402bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
8853 O_BomoMG2540_complete:A_BomoMG_comp21947_c0_seq2
543bp
 PREDICTED:_organic_cation_transporter_protein-like_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006915 P apoptotic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
8854 O_BomoMG25411_complete:A_BomoMG_comp41117_c0_seq5
402bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
8855 O_BomoMG25413_complete:A_BomoMG_comp41117_c0_seq6
402bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
8856 O_BomoMG25414_3prime_partial:A_BomoMG_comp41117_c0_seq7
412bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
8857 O_BomoMG25424_complete:A_BomoMG_comp41117_c0_seq14
402bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
8858 O_BomoMG25429_5prime_partial:A_BomoMG_comp41117_c0_seq17
497bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
8859 O_BomoMG2542_5prime_partial:A_BomoMG_comp21948_c0_seq1
615bp
 PREDICTED:_RNA_polymerase_II_subunit_A_C-terminal_domain_phosphatase_isoform_X2_[Bombyx_mori]
GO:0000922 C spindle pole
GO:0004721 F phosphoprotein phosphatase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006366 P transcription by RNA polymerase II
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0006470 P protein dephosphorylation
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008420 F RNA polymerase II CTD heptapeptide repeat phosphatase activity
GO:0010458 P exit from mitosis
GO:0015629 C actin cytoskeleton
GO:0016591 C RNA polymerase II, holoenzyme
GO:0016787 F hydrolase activity
GO:0030496 C midbody
GO:0050434 P positive regulation of viral transcription
GO:0051233 C spindle midzone
GO:0051301 P cell division
GO:0061052 P negative regulation of cell growth involved in cardiac muscle cell development
GO:0070940 P dephosphorylation of RNA polymerase II C-terminal domain
8860 O_BomoMG25431_3prime_partial:A_BomoMG_comp41117_c0_seq20
412bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
8861 O_BomoMG25432_complete:A_BomoMG_comp41117_c0_seq21
402bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
8862 O_BomoMG25434_5prime_partial:A_BomoMG_comp41117_c0_seq22
497bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
8863 O_BomoMG25436_5prime_partial:A_BomoMG_comp41117_c0_seq23
497bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
8864 O_BomoMG25439_complete:A_BomoMG_comp41117_c0_seq25
402bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
8865 O_BomoMG2543_complete:A_BomoMG_comp21948_c0_seq1
177bp
 PREDICTED:_RNA_polymerase_II_subunit_A_C-terminal_domain_phosphatase_isoform_X2_[Bombyx_mori]
8866 O_BomoMG25447_complete:A_BomoMG_comp41117_c0_seq29
402bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
8867 O_BomoMG25452_5prime_partial:A_BomoMG_comp41117_c0_seq32
497bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
8868 O_BomoMG2545_complete:A_BomoMG_comp21951_c0_seq1
177bp
 Frataxin-like,_mitochondrial_[Papilio_xuthus]
GO:0004322 F ferroxidase activity
GO:0005739 C mitochondrion
GO:0006783 P heme biosynthetic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006879 P cellular iron ion homeostasis
GO:0008199 F ferric iron binding
GO:0010039 P response to iron ion
GO:0016226 P iron-sulfur cluster assembly
GO:0016491 F oxidoreductase activity
GO:0019896 P axonal transport of mitochondrion
GO:0034986 F iron chaperone activity
GO:0035073 P pupariation
GO:0042542 P response to hydrogen peroxide
GO:0045823 P positive regulation of heart contraction
GO:0045998 P positive regulation of ecdysteroid biosynthetic process
GO:0051881 P regulation of mitochondrial membrane potential
GO:0055072 P iron ion homeostasis
GO:0055114 P obsolete oxidation-reduction process
GO:1904115 C axon cytoplasm
8869 O_BomoMG25469_complete:A_BomoMG_comp41118_c1_seq2
142bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
8870 O_BomoMG25471_5prime_partial:A_BomoMG_comp41118_c1_seq5
664bp
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0007293 P germarium-derived egg chamber formation
GO:0032007 P negative regulation of TOR signaling
GO:0034198 P cellular response to amino acid starvation
GO:0035859 C Seh1-associated complex
GO:0038202 P TORC1 signaling
GO:0044754 C autolysosome
GO:0045792 P negative regulation of cell size
GO:0048477 P oogenesis
8871 O_BomoMG25473_complete:A_BomoMG_comp41118_c1_seq5
136bp
8872 O_BomoMG25476_complete:A_BomoMG_comp41118_c1_seq6
101bp
8873 O_BomoMG25477_complete:A_BomoMG_comp41118_c1_seq7
315bp
8874 O_BomoMG25479_complete:A_BomoMG_comp41118_c1_seq7
269bp
GO:0003824 F catalytic activity
GO:0004731 F purine-nucleoside phosphorylase activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006139 P nucleobase-containing compound metabolic process
GO:0009116 P nucleoside metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016763 F pentosyltransferase activity
GO:0043101 P purine-containing compound salvage
8875 O_BomoMG2547_complete:A_BomoMG_comp21954_c0_seq1
636bp
 ATP-binding_cassette_transporter_subfamily_G_member_Bm3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0033344 P cholesterol efflux
GO:0034041 F ABC-type sterol transporter activity
GO:0042803 F protein homodimerization activity
GO:0046982 F protein heterodimerization activity
GO:0055085 P transmembrane transport
8876 O_BomoMG25480_complete:A_BomoMG_comp41118_c1_seq7
142bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
8877 O_BomoMG25483_5prime_partial:A_BomoMG_comp41118_c1_seq8
664bp
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0007293 P germarium-derived egg chamber formation
GO:0032007 P negative regulation of TOR signaling
GO:0034198 P cellular response to amino acid starvation
GO:0035859 C Seh1-associated complex
GO:0038202 P TORC1 signaling
GO:0044754 C autolysosome
GO:0045792 P negative regulation of cell size
GO:0048477 P oogenesis
8878 O_BomoMG25485_complete:A_BomoMG_comp41118_c1_seq8
136bp
8879 O_BomoMG25488_complete:A_BomoMG_comp41118_c1_seq10
477bp
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0006629 P lipid metabolic process
GO:0006694 P steroid biosynthetic process
GO:0006701 P progesterone biosynthetic process
GO:0006810 P transport
GO:0006839 P mitochondrial transport
GO:0006869 P lipid transport
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008289 F lipid binding
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031902 C late endosome membrane
8880 O_BomoMG25489_complete:A_BomoMG_comp41118_c1_seq10
331bp
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