SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/16985
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8761 O_BomoMG2518_complete:A_BomoMG_comp21924_c0_seq1
431bp
 putative_ubiquitin-conjugating_enzyme_morgue_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
8762 O_BomoMG25190_complete:A_BomoMG_comp41109_c1_seq4
568bp
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003873 F 6-phosphofructo-2-kinase activity
GO:0004331 F fructose-2,6-bisphosphate 2-phosphatase activity
GO:0005524 F ATP binding
GO:0006000 P fructose metabolic process
GO:0006003 P fructose 2,6-bisphosphate metabolic process
GO:0008152 P metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016311 P dephosphorylation
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0046835 P carbohydrate phosphorylation
8763 O_BomoMG25192_complete:A_BomoMG_comp41109_c3_seq1
1064bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
8764 O_BomoMG25193_5prime_partial:A_BomoMG_comp41109_c3_seq1
586bp
8765 O_BomoMG251_5prime_partial:A_BomoMG_comp17563_c0_seq1
444bp
 PREDICTED:_proton-coupled_folate_transporter-like_isoform_X1_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
8766 O_BomoMG25201_complete:A_BomoMG_comp41109_c3_seq3
751bp
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030154 P cell differentiation
8767 O_BomoMG25202_5prime_partial:A_BomoMG_comp41109_c3_seq4
586bp
8768 O_BomoMG25203_complete:A_BomoMG_comp41109_c3_seq4
257bp
8769 O_BomoMG25204_complete:A_BomoMG_comp41109_c3_seq4
172bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
8770 O_BomoMG25208_complete:A_BomoMG_comp41109_c3_seq4
123bp
8771 O_BomoMG2520_5prime_partial:A_BomoMG_comp21926_c0_seq1
336bp
 PREDICTED:_uncharacterized_protein_LOC101744657_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0042594 P response to starvation
GO:0044351 P macropinocytosis
8772 O_BomoMG25214_5prime_partial:A_BomoMG_comp41109_c3_seq5
100bp
8773 O_BomoMG25215_5prime_partial:A_BomoMG_comp41109_c3_seq8
173bp
8774 O_BomoMG25216_5prime_partial:A_BomoMG_comp41109_c3_seq8
100bp
8775 O_BomoMG25217_5prime_partial:A_BomoMG_comp41109_c3_seq9
586bp
8776 O_BomoMG25218_complete:A_BomoMG_comp41109_c3_seq9
257bp
8777 O_BomoMG25220_3prime_partial:A_BomoMG_comp41109_c3_seq9
144bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
8778 O_BomoMG25225_complete:A_BomoMG_comp41109_c3_seq10
751bp
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030154 P cell differentiation
8779 O_BomoMG25226_complete:A_BomoMG_comp41109_c3_seq10
292bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
8780 O_BomoMG25228_3prime_partial:A_BomoMG_comp41109_c3_seq11
687bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
8781 O_BomoMG25229_5prime_partial:A_BomoMG_comp41109_c3_seq11
586bp
8782 O_BomoMG25237_complete:A_BomoMG_comp41109_c3_seq18
828bp
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005776 C autophagosome
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0007033 P vacuole organization
GO:0008333 P endosome to lysosome transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030136 C clathrin-coated vesicle
GO:0030424 C axon
GO:0030897 C HOPS complex
GO:0031410 C cytoplasmic vesicle
GO:0031902 C late endosome membrane
GO:0032889 P regulation of vacuole fusion, non-autophagic
GO:0035542 P regulation of SNARE complex assembly
GO:0043025 C neuronal cell body
GO:0051015 F actin filament binding
GO:0055037 C recycling endosome
GO:0097352 P autophagosome maturation
8783 O_BomoMG25239_complete:A_BomoMG_comp41109_c3_seq19
751bp
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030154 P cell differentiation
8784 O_BomoMG25240_5prime_partial:A_BomoMG_comp41109_c3_seq19
100bp
8785 O_BomoMG25241_complete:A_BomoMG_comp41109_c3_seq20
805bp
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005776 C autophagosome
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0007033 P vacuole organization
GO:0008333 P endosome to lysosome transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030136 C clathrin-coated vesicle
GO:0030424 C axon
GO:0030897 C HOPS complex
GO:0031410 C cytoplasmic vesicle
GO:0031902 C late endosome membrane
GO:0032889 P regulation of vacuole fusion, non-autophagic
GO:0035542 P regulation of SNARE complex assembly
GO:0043025 C neuronal cell body
GO:0051015 F actin filament binding
GO:0055037 C recycling endosome
GO:0097352 P autophagosome maturation
8786 O_BomoMG25243_5prime_partial:A_BomoMG_comp41109_c3_seq21
100bp
8787 O_BomoMG25244_complete:A_BomoMG_comp41109_c3_seq22
887bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
8788 O_BomoMG25245_5prime_partial:A_BomoMG_comp41109_c3_seq22
586bp
8789 O_BomoMG2524_3prime_partial:A_BomoMG_comp21934_c0_seq1
642bp
 PREDICTED:_long-chain-fatty-acid--CoA_ligase_4_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005811 C lipid droplet
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006641 P triglyceride metabolic process
GO:0007584 P response to nutrient
GO:0008152 P metabolic process
GO:0008610 P lipid biosynthetic process
GO:0015908 P fatty acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:0030182 P neuron differentiation
GO:0030307 P positive regulation of cell growth
GO:0031090 C organelle membrane
GO:0031957 F very long-chain fatty acid-CoA ligase activity
GO:0031966 C mitochondrial membrane
GO:0032307 P negative regulation of prostaglandin secretion
GO:0035338 P long-chain fatty-acyl-CoA biosynthetic process
GO:0043025 C neuronal cell body
GO:0043231 C intracellular membrane-bounded organelle
GO:0044233 C mitochondria-associated endoplasmic reticulum membrane
GO:0047676 F arachidonate-CoA ligase activity
GO:0060136 P embryonic process involved in female pregnancy
GO:0060996 P dendritic spine development
GO:0070062 C extracellular exosome
GO:0070672 P response to interleukin-15
8790 O_BomoMG25253_complete:A_BomoMG_comp41109_c3_seq23
292bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
previous next from show/16985

- SilkBase 1999-2023 -