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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
841 O_BomoMG11290_internal:A_BomoMG_comp38652_c1_seq1
112bp
 PREDICTED:_calphotin_[Bombyx_mori]
842 O_BomoMG11292_complete:A_BomoMG_comp38654_c0_seq1
319bp
 putative_RDH13_[Operophtera_brumata]
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
GO:0009644 P response to high light intensity
GO:0010842 P retina layer formation
GO:0016491 F oxidoreductase activity
GO:0042462 P eye photoreceptor cell development
GO:0055114 P obsolete oxidation-reduction process
843 O_BomoMG11293_5prime_partial:A_BomoMG_comp38655_c0_seq1
702bp
 PREDICTED:_RNA-binding_protein_5-A-like_isoform_X2_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0046872 F metal ion binding
844 O_BomoMG11294_complete:A_BomoMG_comp38655_c0_seq2
365bp
 RNA-binding_protein_5-A_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0046872 F metal ion binding
845 O_BomoMG11296_complete:A_BomoMG_comp38655_c0_seq3
693bp
 PREDICTED:_RNA-binding_protein_5-A-like_isoform_X2_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0046872 F metal ion binding
846 O_BomoMG11299_5prime_partial:A_BomoMG_comp38655_c0_seq4
702bp
 PREDICTED:_RNA-binding_protein_5-A-like_isoform_X2_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0046872 F metal ion binding
847 O_BomoMG1129_3prime_partial:A_BomoMG_comp19899_c0_seq1
658bp
 PREDICTED:_uncharacterized_protein_LOC101746598_[Bombyx_mori]
848 O_BomoMG11301_complete:A_BomoMG_comp38655_c0_seq5
693bp
 PREDICTED:_RNA-binding_protein_5-A-like_isoform_X2_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0046872 F metal ion binding
849 O_BomoMG11303_complete:A_BomoMG_comp38655_c0_seq6
693bp
 PREDICTED:_RNA-binding_protein_5-A-like_isoform_X2_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0046872 F metal ion binding
850 O_BomoMG11304_complete:A_BomoMG_comp38655_c0_seq7
365bp
 RNA-binding_protein_5-A_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0046872 F metal ion binding
851 O_BomoMG11305_complete:A_BomoMG_comp38655_c0_seq8
693bp
 PREDICTED:_RNA-binding_protein_5-A-like_isoform_X2_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0046872 F metal ion binding
852 O_BomoMG11307_complete:A_BomoMG_comp38656_c0_seq1
675bp
 PREDICTED:_glutamine--fructose-6-phosphate_aminotransferase_[isomerizing]_1-like_[Amyelois_transitella]
GO:0004360 F glutamine-fructose-6-phosphate transaminase (isomerizing) activity
GO:0005975 P carbohydrate metabolic process
GO:0006002 P fructose 6-phosphate metabolic process
GO:0006042 P glucosamine biosynthetic process
GO:0006047 P UDP-N-acetylglucosamine metabolic process
GO:0006048 P UDP-N-acetylglucosamine biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0009744 P response to sucrose
GO:0016597 F amino acid binding
GO:0016740 F transferase activity
GO:0030246 F carbohydrate binding
GO:0032868 P response to insulin
GO:0032869 P cellular response to insulin stimulus
GO:0032922 P circadian regulation of gene expression
GO:0045719 P negative regulation of glycogen biosynthetic process
GO:0048511 P rhythmic process
GO:0051289 P protein homotetramerization
GO:1901137 P carbohydrate derivative biosynthetic process
853 O_BomoMG11309_complete:A_BomoMG_comp38657_c0_seq5
435bp
 PREDICTED:_26S_protease_regulatory_subunit_7_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000502 C proteasome complex
GO:0000932 C P-body
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0022624 C proteasome accessory complex
GO:0030163 P protein catabolic process
854 O_BomoMG11312_complete:A_BomoMG_comp38658_c0_seq1
276bp
 PREDICTED:_putative_methyltransferase_WBSCR22-like_protein_isoform_X1_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006364 P rRNA processing
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0042254 P ribosome biogenesis
GO:0044822 F RNA binding
855 O_BomoMG11315_complete:A_BomoMG_comp38658_c0_seq2
101bp
 PREDICTED:_putative_methyltransferase_WBSCR22-like_protein_isoform_X2_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006364 P rRNA processing
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0042254 P ribosome biogenesis
GO:0044822 F RNA binding
856 O_BomoMG11316_5prime_partial:A_BomoMG_comp38658_c0_seq3
244bp
 putative_methyltransferase_WBSCR22-like_protein_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006364 P rRNA processing
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0042254 P ribosome biogenesis
GO:0044822 F RNA binding
857 O_BomoMG11320_complete:A_BomoMG_comp38658_c0_seq4
101bp
 PREDICTED:_putative_methyltransferase_WBSCR22-like_protein_isoform_X2_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006364 P rRNA processing
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0042254 P ribosome biogenesis
GO:0044822 F RNA binding
858 O_BomoMG11322_complete:A_BomoMG_comp38658_c0_seq5
153bp
 PREDICTED:_putative_methyltransferase_WBSCR22-like_protein_isoform_X1_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006364 P rRNA processing
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0042254 P ribosome biogenesis
GO:0044822 F RNA binding
859 O_BomoMG11323_complete:A_BomoMG_comp38658_c0_seq5
101bp
 PREDICTED:_putative_methyltransferase_WBSCR22-like_protein_isoform_X2_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006364 P rRNA processing
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0042254 P ribosome biogenesis
GO:0044822 F RNA binding
860 O_BomoMG11324_5prime_partial:A_BomoMG_comp38659_c0_seq1
452bp
 PREDICTED:_splicing_factor,_arginine/serine-rich_15_[Bombyx_mori]
861 O_BomoMG11325_3prime_partial:A_BomoMG_comp38659_c0_seq1
326bp
 hypothetical_protein_predicted_by_Glimmer/Critica_[Sorangium_cellulosum_So_ce56]
862 O_BomoMG11327_complete:A_BomoMG_comp38659_c0_seq1
136bp
 hypothetical_protein_ZTR_03204_[Talaromyces_verruculosus]
863 O_BomoMG11328_5prime_partial:A_BomoMG_comp38659_c0_seq2
452bp
 PREDICTED:_splicing_factor,_arginine/serine-rich_15_[Bombyx_mori]
864 O_BomoMG11329_3prime_partial:A_BomoMG_comp38659_c0_seq2
326bp
 hypothetical_protein_predicted_by_Glimmer/Critica_[Sorangium_cellulosum_So_ce56]
865 O_BomoMG1132_5prime_partial:A_BomoMG_comp19899_c0_seq2
307bp
 PREDICTED:_uncharacterized_protein_LOC101746598_[Bombyx_mori]
866 O_BomoMG11331_complete:A_BomoMG_comp38659_c0_seq2
136bp
 hypothetical_protein_ZTR_03204_[Talaromyces_verruculosus]
867 O_BomoMG11332_3prime_partial:A_BomoMG_comp38660_c0_seq2
324bp
 PREDICTED:_uncharacterized_protein_LOC106130452_[Amyelois_transitella]
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0008054 P anaphase-promoting complex-dependent catabolic process
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
GO:0030332 F cyclin binding
GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031571 P mitotic G1 DNA damage checkpoint signaling
868 O_BomoMG11333_5prime_partial:A_BomoMG_comp38661_c0_seq2
127bp
 PREDICTED:_probable_dynactin_subunit_2_[Plutella_xylostella]
GO:0003774 F cytoskeletal motor activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005869 C dynactin complex
GO:0005874 C microtubule
GO:0007017 P microtubule-based process
GO:0007067 P mitotic cell cycle
GO:0008152 P metabolic process
GO:0008283 P cell population proliferation
GO:0016020 C membrane
GO:0030286 C dynein complex
GO:0031982 C vesicle
869 O_BomoMG11334_internal:A_BomoMG_comp38663_c0_seq1
484bp
 PREDICTED:_actin_cytoskeleton-regulatory_complex_protein_pan1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007379 P segment specification
870 O_BomoMG11337_complete:A_BomoMG_comp38664_c0_seq1
778bp
 PREDICTED:_uncharacterized_protein_LOC106129803_[Amyelois_transitella]
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