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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
811 O_BomoMG11242_3prime_partial:A_BomoMG_comp38627_c0_seq3
568bp
 PREDICTED:_uncharacterized_protein_LOC101741121_[Bombyx_mori]
812 O_BomoMG11247_complete:A_BomoMG_comp38631_c0_seq1
900bp
 PREDICTED:_xylosyltransferase_oxt_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0008375 F acetylglucosaminyltransferase activity
GO:0015012 P heparan sulfate proteoglycan biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030158 F protein xylosyltransferase activity
GO:0030201 P heparan sulfate proteoglycan metabolic process
GO:0030204 P chondroitin sulfate metabolic process
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0042732 P D-xylose metabolic process
GO:0050650 P chondroitin sulfate proteoglycan biosynthetic process
813 O_BomoMG11248_5prime_partial:A_BomoMG_comp38632_c0_seq2
666bp
 PREDICTED:_uncharacterized_protein_LOC106101641_[Papilio_polytes]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0043547 P positive regulation of GTPase activity
814 O_BomoMG1124_complete:A_BomoMG_comp19892_c0_seq1
128bp
 PREDICTED:_uncharacterized_protein_LOC106132669_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006260 P DNA replication
GO:0008150 P biological_process
815 O_BomoMG11250_internal:A_BomoMG_comp38632_c0_seq4
215bp
 PREDICTED:_uncharacterized_protein_LOC106708341_isoform_X1_[Papilio_machaon]
816 O_BomoMG11251_5prime_partial:A_BomoMG_comp38635_c1_seq1
430bp
 vasa-like_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0008104 P protein localization
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0048477 P oogenesis
817 O_BomoMG11252_complete:A_BomoMG_comp38635_c1_seq2
153bp
 vasa-like_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0008104 P protein localization
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0048477 P oogenesis
818 O_BomoMG11254_complete:A_BomoMG_comp38636_c0_seq2
344bp
 PREDICTED:_magnesium_transporter_NIPA2_[Bombyx_mori]
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015095 F magnesium ion transmembrane transporter activity
GO:0015693 P magnesium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:1903830 P magnesium ion transmembrane transport
819 O_BomoMG1125_complete:A_BomoMG_comp19893_c0_seq1
482bp
 PREDICTED:_protein_SMG9_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
820 O_BomoMG11260_complete:A_BomoMG_comp38636_c0_seq6
354bp
 PREDICTED:_magnesium_transporter_NIPA2_[Bombyx_mori]
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015095 F magnesium ion transmembrane transporter activity
GO:0015693 P magnesium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:1903830 P magnesium ion transmembrane transport
821 O_BomoMG11261_complete:A_BomoMG_comp38637_c1_seq1
174bp
 PREDICTED:_nuclear_receptor_subfamily_1_group_I_member_2-like,_partial_[Amyelois_transitella]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004879 F nuclear receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008270 F zinc ion binding
GO:0010906 P regulation of glucose metabolic process
GO:0030522 P intracellular receptor signaling pathway
GO:0042594 P response to starvation
GO:0042632 P cholesterol homeostasis
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
GO:0070328 P triglyceride homeostasis
GO:0070873 P regulation of glycogen metabolic process
822 O_BomoMG11262_5prime_partial:A_BomoMG_comp38637_c1_seq2
273bp
 PREDICTED:_nuclear_receptor_subfamily_1_group_I_member_2-like,_partial_[Amyelois_transitella]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004879 F nuclear receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008270 F zinc ion binding
GO:0010906 P regulation of glucose metabolic process
GO:0030522 P intracellular receptor signaling pathway
GO:0042594 P response to starvation
GO:0042632 P cholesterol homeostasis
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
GO:0070328 P triglyceride homeostasis
GO:0070873 P regulation of glycogen metabolic process
823 O_BomoMG11264_complete:A_BomoMG_comp38637_c1_seq3
564bp
 PREDICTED:_nuclear_hormone_receptor_family_member_nhr-8-like_[Amyelois_transitella]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004879 F nuclear receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008270 F zinc ion binding
GO:0010906 P regulation of glucose metabolic process
GO:0030522 P intracellular receptor signaling pathway
GO:0042594 P response to starvation
GO:0042632 P cholesterol homeostasis
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
GO:0070328 P triglyceride homeostasis
GO:0070873 P regulation of glycogen metabolic process
824 O_BomoMG11266_5prime_partial:A_BomoMG_comp38640_c0_seq1
293bp
 PREDICTED:_phosphoribosyl_pyrophosphate_synthase-associated_protein_2_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0004749 F ribose phosphate diphosphokinase activity
GO:0009165 P nucleotide biosynthetic process
825 O_BomoMG11267_complete:A_BomoMG_comp38640_c0_seq2
375bp
 PREDICTED:_phosphoribosyl_pyrophosphate_synthase-associated_protein_2_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0004749 F ribose phosphate diphosphokinase activity
GO:0009165 P nucleotide biosynthetic process
826 O_BomoMG11268_complete:A_BomoMG_comp38642_c0_seq1
471bp
 PREDICTED:_uncharacterized_protein_LOC106109836_[Papilio_polytes]
827 O_BomoMG1126_5prime_partial:A_BomoMG_comp19893_c0_seq2
141bp
 PREDICTED:_protein_SMG9_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
828 O_BomoMG11271_complete:A_BomoMG_comp38644_c2_seq1
254bp
 Uncharacterized_protein_OBRU01_15802_[Operophtera_brumata]
829 O_BomoMG11273_internal:A_BomoMG_comp38645_c0_seq1
143bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
830 O_BomoMG11274_3prime_partial:A_BomoMG_comp38646_c0_seq1
115bp
 PREDICTED:_uncharacterized_protein_LOC106102294_[Papilio_polytes]
831 O_BomoMG11276_complete:A_BomoMG_comp38647_c0_seq2
303bp
 glutamyl-tRNA_amidotransferase_subunit_B_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0016874 F ligase activity
GO:0016884 F carbon-nitrogen ligase activity, with glutamine as amido-N-donor
832 O_BomoMG11278_complete:A_BomoMG_comp38647_c0_seq3
406bp
 glutamyl-tRNA_amidotransferase_subunit_B_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0016874 F ligase activity
GO:0016884 F carbon-nitrogen ligase activity, with glutamine as amido-N-donor
833 O_BomoMG1127_complete:A_BomoMG_comp19894_c0_seq1
342bp
 PREDICTED:_protein_TAPT1_homolog_isoform_X2_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
834 O_BomoMG11280_complete:A_BomoMG_comp38647_c0_seq4
218bp
 glutamyl-tRNA_amidotransferase_subunit_B_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0016874 F ligase activity
GO:0016884 F carbon-nitrogen ligase activity, with glutamine as amido-N-donor
835 O_BomoMG11281_5prime_partial:A_BomoMG_comp38648_c0_seq1
283bp
 PREDICTED:_uridine-cytidine_kinase_2_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004849 F uridine kinase activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005829 C cytosol
GO:0006206 P pyrimidine nucleobase metabolic process
GO:0006238 P CMP salvage
GO:0006909 P phagocytosis
GO:0008152 P metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019206 F nucleoside kinase activity
GO:0043097 P pyrimidine nucleoside salvage
GO:0044206 P UMP salvage
GO:0044211 P CTP salvage
836 O_BomoMG11282_complete:A_BomoMG_comp38649_c1_seq1
178bp
 PREDICTED:_upstream_stimulatory_factor_1-like_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046983 F protein dimerization activity
837 O_BomoMG11283_complete:A_BomoMG_comp38649_c1_seq2
244bp
 PREDICTED:_upstream_stimulatory_factor_2_[Plutella_xylostella]
GO:0000430 P regulation of transcription from RNA polymerase II promoter by glucose
GO:0000432 P positive regulation of transcription from RNA polymerase II promoter by glucose
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007595 P lactation
GO:0019086 P late viral transcription
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0043425 F bHLH transcription factor binding
GO:0043565 F sequence-specific DNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0055088 P lipid homeostasis
838 O_BomoMG11285_complete:A_BomoMG_comp38651_c0_seq1
282bp
 PREDICTED:_E3_ubiquitin-protein_ligase_SIAH1-like_[Amyelois_transitella]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0008022 F protein C-terminus binding
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030154 P cell differentiation
GO:0030163 P protein catabolic process
GO:0030877 C beta-catenin destruction complex
GO:0031648 P protein destabilization
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0042802 F identical protein binding
GO:0043065 P positive regulation of apoptotic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0051402 P neuron apoptotic process
GO:0061630 F ubiquitin protein ligase activity
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
839 O_BomoMG11287_internal:A_BomoMG_comp38652_c0_seq1
120bp
PREDICTED:_actin_cytoskeleton-regulatory_complex_protein_PAN1_[Bombyx_mori]
840 O_BomoMG1128_complete:A_BomoMG_comp19896_c0_seq1
344bp
 PREDICTED:_28S_ribosomal_protein_S35,_mitochondrial_[Plutella_xylostella]
GO:0003735 F structural constituent of ribosome
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0030529 C ribonucleoprotein complex
GO:0042769 P obsolete DNA damage response, detection of DNA damage
GO:0044822 F RNA binding
GO:0070125 P mitochondrial translational elongation
GO:0070126 P mitochondrial translational termination
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