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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8041 O_BomoMG23894_complete:A_BomoMG_comp41028_c0_seq2
315bp
GO:0000166 F nucleotide binding
GO:0004747 F ribokinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0006014 P D-ribose metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019303 P D-ribose catabolic process
GO:0046835 P carbohydrate phosphorylation
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
8042 O_BomoMG23895_complete:A_BomoMG_comp41028_c0_seq3
257bp
GO:0000166 F nucleotide binding
GO:0004747 F ribokinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0006014 P D-ribose metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019303 P D-ribose catabolic process
GO:0046835 P carbohydrate phosphorylation
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
8043 O_BomoMG23896_complete:A_BomoMG_comp41028_c0_seq4
164bp
GO:0000166 F nucleotide binding
GO:0004747 F ribokinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0006014 P D-ribose metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019303 P D-ribose catabolic process
GO:0046835 P carbohydrate phosphorylation
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
8044 O_BomoMG23897_complete:A_BomoMG_comp41028_c0_seq4
108bp
GO:0000166 F nucleotide binding
GO:0004747 F ribokinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0006014 P D-ribose metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019303 P D-ribose catabolic process
GO:0046835 P carbohydrate phosphorylation
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
8045 O_BomoMG23898_complete:A_BomoMG_comp41028_c0_seq7
257bp
GO:0000166 F nucleotide binding
GO:0004747 F ribokinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0006014 P D-ribose metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019303 P D-ribose catabolic process
GO:0046835 P carbohydrate phosphorylation
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
8046 O_BomoMG23899_complete:A_BomoMG_comp41028_c0_seq9
164bp
GO:0000166 F nucleotide binding
GO:0004747 F ribokinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0006014 P D-ribose metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019303 P D-ribose catabolic process
GO:0046835 P carbohydrate phosphorylation
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
8047 O_BomoMG2389_internal:A_BomoMG_comp21741_c0_seq1
1040bp
 PREDICTED:_phosphoinositide_3-kinase_regulatory_subunit_4_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005643 C nuclear pore
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0005930 C axoneme
GO:0006468 P protein phosphorylation
GO:0006623 P protein targeting to vacuole
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0016020 C membrane
GO:0016236 P macroautophagy
GO:0016301 F kinase activity
GO:0016303 F 1-phosphatidylinositol-3-kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030242 P autophagy of peroxisome
GO:0030670 C phagocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032465 P regulation of cytokinesis
GO:0032801 P receptor catabolic process
GO:0034162 P toll-like receptor 9 signaling pathway
GO:0034271 C phosphatidylinositol 3-kinase complex, class III, type I
GO:0034272 C phosphatidylinositol 3-kinase complex, class III, type II
GO:0035032 C phosphatidylinositol 3-kinase complex, class III
GO:0036092 P phosphatidylinositol-3-phosphate biosynthetic process
GO:0042149 P cellular response to glucose starvation
GO:0043552 P positive regulation of phosphatidylinositol 3-kinase activity
GO:0045324 P late endosome to vacuole transport
GO:0071561 C nucleus-vacuole junction
8048 O_BomoMG23900_complete:A_BomoMG_comp41028_c0_seq9
108bp
GO:0000166 F nucleotide binding
GO:0004747 F ribokinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0006014 P D-ribose metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019303 P D-ribose catabolic process
GO:0046835 P carbohydrate phosphorylation
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
8049 O_BomoMG23901_complete:A_BomoMG_comp41028_c0_seq11
166bp
GO:0000166 F nucleotide binding
GO:0004747 F ribokinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0006014 P D-ribose metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019303 P D-ribose catabolic process
GO:0046835 P carbohydrate phosphorylation
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
8050 O_BomoMG23902_complete:A_BomoMG_comp41028_c0_seq11
164bp
GO:0000166 F nucleotide binding
GO:0004747 F ribokinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0006014 P D-ribose metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019303 P D-ribose catabolic process
GO:0046835 P carbohydrate phosphorylation
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
8051 O_BomoMG23903_complete:A_BomoMG_comp41028_c0_seq12
254bp
GO:0000166 F nucleotide binding
GO:0004747 F ribokinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0006014 P D-ribose metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019303 P D-ribose catabolic process
GO:0046835 P carbohydrate phosphorylation
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
8052 O_BomoMG23904_5prime_partial:A_BomoMG_comp41029_c1_seq1
280bp
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0043565 F sequence-specific DNA binding
8053 O_BomoMG23905_5prime_partial:A_BomoMG_comp41029_c1_seq2
280bp
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0043565 F sequence-specific DNA binding
8054 O_BomoMG23906_complete:A_BomoMG_comp41029_c1_seq3
700bp
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0043565 F sequence-specific DNA binding
8055 O_BomoMG23909_5prime_partial:A_BomoMG_comp41029_c1_seq5
414bp
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0043565 F sequence-specific DNA binding
8056 O_BomoMG23911_5prime_partial:A_BomoMG_comp41030_c1_seq1
307bp
GO:0003777 F microtubule motor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0046907 P intracellular transport
8057 O_BomoMG23912_complete:A_BomoMG_comp41030_c1_seq2
247bp
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0046907 P intracellular transport
8058 O_BomoMG23913_5prime_partial:A_BomoMG_comp41030_c1_seq2
103bp
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0046907 P intracellular transport
8059 O_BomoMG23914_5prime_partial:A_BomoMG_comp41030_c1_seq3
249bp
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0046907 P intracellular transport
8060 O_BomoMG23916_complete:A_BomoMG_comp41030_c1_seq4
189bp
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0046907 P intracellular transport
8061 O_BomoMG23918_5prime_partial:A_BomoMG_comp41030_c1_seq4
103bp
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0046907 P intracellular transport
8062 O_BomoMG23919_5prime_partial:A_BomoMG_comp41030_c3_seq5
551bp
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005662 C DNA replication factor A complex
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
GO:0071987 F WD40-repeat domain binding
GO:0072422 P DNA damage checkpoint signaling
8063 O_BomoMG23920_complete:A_BomoMG_comp41030_c3_seq5
478bp
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006103 P 2-oxoglutarate metabolic process
GO:0006536 P glutamate metabolic process
GO:0006554 P lysine catabolic process
GO:0006569 P tryptophan catabolic process
GO:0008483 F transaminase activity
GO:0009058 P biosynthetic process
GO:0016212 F kynurenine-oxoglutarate transaminase activity
GO:0016740 F transferase activity
GO:0019441 P tryptophan catabolic process to kynurenine
GO:0030170 F pyridoxal phosphate binding
GO:0033512 P L-lysine catabolic process to acetyl-CoA via saccharopine
GO:0042803 F protein homodimerization activity
GO:0047536 F 2-aminoadipate transaminase activity
GO:0070189 P kynurenine metabolic process
GO:0097052 P L-kynurenine metabolic process
8064 O_BomoMG23922_5prime_partial:A_BomoMG_comp41030_c3_seq6
551bp
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005662 C DNA replication factor A complex
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
GO:0071987 F WD40-repeat domain binding
GO:0072422 P DNA damage checkpoint signaling
8065 O_BomoMG23924_complete:A_BomoMG_comp41030_c3_seq6
126bp
8066 O_BomoMG23925_complete:A_BomoMG_comp41030_c3_seq7
478bp
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006103 P 2-oxoglutarate metabolic process
GO:0006536 P glutamate metabolic process
GO:0006554 P lysine catabolic process
GO:0006569 P tryptophan catabolic process
GO:0008483 F transaminase activity
GO:0009058 P biosynthetic process
GO:0016212 F kynurenine-oxoglutarate transaminase activity
GO:0016740 F transferase activity
GO:0019441 P tryptophan catabolic process to kynurenine
GO:0030170 F pyridoxal phosphate binding
GO:0033512 P L-lysine catabolic process to acetyl-CoA via saccharopine
GO:0042803 F protein homodimerization activity
GO:0047536 F 2-aminoadipate transaminase activity
GO:0070189 P kynurenine metabolic process
GO:0097052 P L-kynurenine metabolic process
8067 O_BomoMG23926_5prime_partial:A_BomoMG_comp41030_c3_seq13
856bp
GO:0000166 F nucleotide binding
GO:0000712 P resolution of meiotic recombination intermediates
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006259 P DNA metabolic process
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0031297 P replication fork processing
GO:0036297 P interstrand cross-link repair
GO:0043240 C Fanconi anaemia nuclear complex
GO:0071821 C FANCM-MHF complex
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
8068 O_BomoMG23927_5prime_partial:A_BomoMG_comp41030_c3_seq13
551bp
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005662 C DNA replication factor A complex
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
GO:0071987 F WD40-repeat domain binding
GO:0072422 P DNA damage checkpoint signaling
8069 O_BomoMG23931_complete:A_BomoMG_comp41030_c3_seq15
478bp
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006103 P 2-oxoglutarate metabolic process
GO:0006536 P glutamate metabolic process
GO:0006554 P lysine catabolic process
GO:0006569 P tryptophan catabolic process
GO:0008483 F transaminase activity
GO:0009058 P biosynthetic process
GO:0016212 F kynurenine-oxoglutarate transaminase activity
GO:0016740 F transferase activity
GO:0019441 P tryptophan catabolic process to kynurenine
GO:0030170 F pyridoxal phosphate binding
GO:0033512 P L-lysine catabolic process to acetyl-CoA via saccharopine
GO:0042803 F protein homodimerization activity
GO:0047536 F 2-aminoadipate transaminase activity
GO:0070189 P kynurenine metabolic process
GO:0097052 P L-kynurenine metabolic process
8070 O_BomoMG23932_complete:A_BomoMG_comp41030_c3_seq16
478bp
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006103 P 2-oxoglutarate metabolic process
GO:0006536 P glutamate metabolic process
GO:0006554 P lysine catabolic process
GO:0006569 P tryptophan catabolic process
GO:0008483 F transaminase activity
GO:0009058 P biosynthetic process
GO:0016212 F kynurenine-oxoglutarate transaminase activity
GO:0016740 F transferase activity
GO:0019441 P tryptophan catabolic process to kynurenine
GO:0030170 F pyridoxal phosphate binding
GO:0033512 P L-lysine catabolic process to acetyl-CoA via saccharopine
GO:0042803 F protein homodimerization activity
GO:0047536 F 2-aminoadipate transaminase activity
GO:0070189 P kynurenine metabolic process
GO:0097052 P L-kynurenine metabolic process
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