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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7141 O_BomoMG22252_3prime_partial:A_BomoMG_comp40902_c1_seq18
646bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7142 O_BomoMG22254_3prime_partial:A_BomoMG_comp40902_c1_seq19
632bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7143 O_BomoMG22256_3prime_partial:A_BomoMG_comp40902_c1_seq20
669bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7144 O_BomoMG22258_3prime_partial:A_BomoMG_comp40902_c1_seq21
572bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7145 O_BomoMG2225_3prime_partial:A_BomoMG_comp21512_c1_seq1
313bp
 PREDICTED:_probable_ATP-dependent_RNA_helicase_DDX27_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0042254 P ribosome biogenesis
GO:0044822 F RNA binding
7146 O_BomoMG22260_3prime_partial:A_BomoMG_comp40902_c1_seq22
344bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7147 O_BomoMG22262_3prime_partial:A_BomoMG_comp40902_c1_seq23
463bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7148 O_BomoMG22264_3prime_partial:A_BomoMG_comp40902_c1_seq24
412bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7149 O_BomoMG22266_3prime_partial:A_BomoMG_comp40902_c1_seq25
646bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7150 O_BomoMG22268_3prime_partial:A_BomoMG_comp40902_c1_seq26
381bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7151 O_BomoMG22270_3prime_partial:A_BomoMG_comp40902_c1_seq27
285bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7152 O_BomoMG22273_3prime_partial:A_BomoMG_comp40904_c0_seq1
432bp
7153 O_BomoMG22274_complete:A_BomoMG_comp40904_c0_seq1
134bp
7154 O_BomoMG22275_5prime_partial:A_BomoMG_comp40904_c1_seq1
315bp
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005198 F structural molecule activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016032 P viral process
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0019028 C viral capsid
GO:0019076 P viral release from host cell
GO:0020002 C host cell plasma membrane
GO:0030430 C host cell cytoplasm
GO:0033644 C host cell membrane
GO:0039702 P viral budding via host ESCRT complex
GO:0042025 C host cell nucleus
GO:0046755 P viral budding
GO:0046872 F metal ion binding
7155 O_BomoMG22279_complete:A_BomoMG_comp40904_c1_seq1
125bp
7156 O_BomoMG2227_complete:A_BomoMG_comp21516_c0_seq1
509bp
 PREDICTED:_synaptic_vesicle_2-related_protein-like_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0006836 P neurotransmitter transport
GO:0007268 P chemical synaptic transmission
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0055085 P transmembrane transport
7157 O_BomoMG22280_complete:A_BomoMG_comp40905_c0_seq1
797bp
7158 O_BomoMG22281_complete:A_BomoMG_comp40906_c2_seq2
230bp
7159 O_BomoMG22282_complete:A_BomoMG_comp40906_c2_seq4
230bp
7160 O_BomoMG22285_complete:A_BomoMG_comp40906_c2_seq7
100bp
7161 O_BomoMG22287_complete:A_BomoMG_comp40906_c2_seq11
230bp
7162 O_BomoMG22289_3prime_partial:A_BomoMG_comp40907_c0_seq2
148bp
7163 O_BomoMG2228_5prime_partial:A_BomoMG_comp21522_c0_seq1
209bp
 PREDICTED:_ATP_synthase_subunit_s,_mitochondrial_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006754 P ATP biosynthetic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0045263 C proton-transporting ATP synthase complex, coupling factor F(o)
GO:0046872 F metal ion binding
7164 O_BomoMG22293_5prime_partial:A_BomoMG_comp40909_c0_seq2
184bp
GO:0000166 F nucleotide binding
GO:0000922 C spindle pole
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005876 C spindle microtubule
GO:0007018 P microtubule-based movement
GO:0007049 P cell cycle
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0051301 P cell division
7165 O_BomoMG22296_5prime_partial:A_BomoMG_comp40909_c0_seq3
184bp
GO:0000166 F nucleotide binding
GO:0000922 C spindle pole
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005876 C spindle microtubule
GO:0007018 P microtubule-based movement
GO:0007049 P cell cycle
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0051301 P cell division
7166 O_BomoMG2229_internal:A_BomoMG_comp21522_c0_seq2
118bp
 PREDICTED:_ATP_synthase_subunit_s,_mitochondrial_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006754 P ATP biosynthetic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0045263 C proton-transporting ATP synthase complex, coupling factor F(o)
GO:0046872 F metal ion binding
7167 O_BomoMG22300_3prime_partial:A_BomoMG_comp40909_c1_seq1
560bp
GO:0000166 F nucleotide binding
GO:0000212 P meiotic spindle organization
GO:0000775 C chromosome, centromeric region
GO:0000922 C spindle pole
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005828 C kinetochore microtubule
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0007018 P microtubule-based movement
GO:0007019 P microtubule depolymerization
GO:0007049 P cell cycle
GO:0007051 P spindle organization
GO:0007052 P mitotic spindle organization
GO:0007057 P spindle assembly involved in female meiosis I
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0007079 P mitotic chromosome movement towards spindle pole
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0008574 F plus-end-directed microtubule motor activity
GO:0051296 P establishment of meiotic spindle orientation
GO:0051298 P centrosome duplication
GO:0051301 P cell division
GO:0055028 C cortical microtubule
GO:0061673 C mitotic spindle astral microtubule
GO:0072687 C meiotic spindle
GO:0090307 P mitotic spindle assembly
GO:0090619 C meiotic spindle pole
GO:0097431 C mitotic spindle pole
7168 O_BomoMG22306_internal:A_BomoMG_comp40909_c1_seq2
381bp
GO:0000166 F nucleotide binding
GO:0000212 P meiotic spindle organization
GO:0000775 C chromosome, centromeric region
GO:0000922 C spindle pole
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005828 C kinetochore microtubule
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0007018 P microtubule-based movement
GO:0007019 P microtubule depolymerization
GO:0007049 P cell cycle
GO:0007051 P spindle organization
GO:0007052 P mitotic spindle organization
GO:0007057 P spindle assembly involved in female meiosis I
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0007079 P mitotic chromosome movement towards spindle pole
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0008574 F plus-end-directed microtubule motor activity
GO:0051296 P establishment of meiotic spindle orientation
GO:0051298 P centrosome duplication
GO:0051301 P cell division
GO:0055028 C cortical microtubule
GO:0061673 C mitotic spindle astral microtubule
GO:0072687 C meiotic spindle
GO:0090307 P mitotic spindle assembly
GO:0090619 C meiotic spindle pole
GO:0097431 C mitotic spindle pole
7169 O_BomoMG22309_internal:A_BomoMG_comp40911_c0_seq1
886bp
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0009790 P embryo development
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046966 F thyroid hormone receptor binding
GO:1901315 P negative regulation of histone H2A K63-linked ubiquitination
GO:2000780 P negative regulation of double-strand break repair
7170 O_BomoMG2230_5prime_partial:A_BomoMG_comp21529_c0_seq1
115bp
 PREDICTED:_uncharacterized_protein_LOC106142693_isoform_X2_[Amyelois_transitella]
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