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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7111 O_BomoMG22199_5prime_partial:A_BomoMG_comp40899_c0_seq1
560bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
7112 O_BomoMG2219_complete:A_BomoMG_comp21505_c0_seq2
263bp
 CRAL-TRIO_domain-containing_protein,_partial_[Manduca_sexta]
GO:0003674 F molecular_function
GO:0005215 F transporter activity
GO:0005622 C intracellular anatomical structure
GO:0006810 P transport
GO:0008150 P biological_process
GO:0016020 C membrane
7113 O_BomoMG221_internal:A_BomoMG_comp17484_c0_seq1
116bp
 PREDICTED:_LIM_domain_kinase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001736 P establishment of planar polarity
GO:0001737 P establishment of imaginal disc-derived wing hair orientation
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0007416 P synapse assembly
GO:0007560 P imaginal disc morphogenesis
GO:0008270 F zinc ion binding
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030036 P actin cytoskeleton organization
GO:0030496 C midbody
GO:0032154 C cleavage furrow
GO:0046872 F metal ion binding
GO:0048749 P compound eye development
GO:0048812 P neuron projection morphogenesis
GO:0050770 P regulation of axonogenesis
GO:0051124 P synaptic assembly at neuromuscular junction
7114 O_BomoMG22202_complete:A_BomoMG_comp40899_c0_seq2
534bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
7115 O_BomoMG22206_complete:A_BomoMG_comp40900_c0_seq4
434bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
7116 O_BomoMG22208_internal:A_BomoMG_comp40900_c3_seq1
250bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
7117 O_BomoMG22209_internal:A_BomoMG_comp40900_c4_seq1
373bp
7118 O_BomoMG2220_3prime_partial:A_BomoMG_comp21507_c0_seq1
199bp
 PREDICTED:_connectin-like_isoform_X1_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007275 P multicellular organism development
GO:0007413 P axonal fasciculation
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016200 P synaptic target attraction
GO:0031225 C anchored component of membrane
GO:0031594 C neuromuscular junction
GO:0044295 C axonal growth cone
7119 O_BomoMG22213_3prime_partial:A_BomoMG_comp40901_c0_seq1
598bp
GO:0000139 C Golgi membrane
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005794 C Golgi apparatus
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0016459 C myosin complex
GO:0031941 C filamentous actin
GO:0032593 C insulin-responsive compartment
GO:0032869 P cellular response to insulin stimulus
GO:0060001 F minus-end directed microfilament motor activity
GO:0072659 P protein localization to plasma membrane
7120 O_BomoMG22216_3prime_partial:A_BomoMG_comp40901_c0_seq2
598bp
GO:0000139 C Golgi membrane
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005794 C Golgi apparatus
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0016459 C myosin complex
GO:0031941 C filamentous actin
GO:0032593 C insulin-responsive compartment
GO:0032869 P cellular response to insulin stimulus
GO:0060001 F minus-end directed microfilament motor activity
GO:0072659 P protein localization to plasma membrane
7121 O_BomoMG22219_internal:A_BomoMG_comp40901_c0_seq3
753bp
GO:0000139 C Golgi membrane
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005794 C Golgi apparatus
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0016459 C myosin complex
GO:0031941 C filamentous actin
GO:0032593 C insulin-responsive compartment
GO:0032869 P cellular response to insulin stimulus
GO:0060001 F minus-end directed microfilament motor activity
GO:0072659 P protein localization to plasma membrane
7122 O_BomoMG2221_internal:A_BomoMG_comp21509_c0_seq1
213bp
 PREDICTED:_intron-binding_protein_aquarius_isoform_X3_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
7123 O_BomoMG22223_3prime_partial:A_BomoMG_comp40902_c1_seq1
449bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7124 O_BomoMG22225_3prime_partial:A_BomoMG_comp40902_c1_seq2
161bp
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7125 O_BomoMG22227_3prime_partial:A_BomoMG_comp40902_c1_seq3
683bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7126 O_BomoMG22229_3prime_partial:A_BomoMG_comp40902_c1_seq4
344bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7127 O_BomoMG2222_internal:A_BomoMG_comp21509_c1_seq1
202bp
 PREDICTED:_intron-binding_protein_aquarius_isoform_X2_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
7128 O_BomoMG22231_3prime_partial:A_BomoMG_comp40902_c1_seq5
632bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7129 O_BomoMG22233_3prime_partial:A_BomoMG_comp40902_c1_seq6
683bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7130 O_BomoMG22235_3prime_partial:A_BomoMG_comp40902_c1_seq8
572bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7131 O_BomoMG22237_3prime_partial:A_BomoMG_comp40902_c1_seq9
381bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7132 O_BomoMG22239_3prime_partial:A_BomoMG_comp40902_c1_seq10
558bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7133 O_BomoMG22241_3prime_partial:A_BomoMG_comp40902_c1_seq11
426bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7134 O_BomoMG22243_3prime_partial:A_BomoMG_comp40902_c1_seq12
270bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7135 O_BomoMG22244_3prime_partial:A_BomoMG_comp40902_c1_seq13
124bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003712 F transcription coregulator activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
7136 O_BomoMG22246_3prime_partial:A_BomoMG_comp40902_c1_seq14
669bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7137 O_BomoMG22248_3prime_partial:A_BomoMG_comp40902_c1_seq15
270bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7138 O_BomoMG22249_3prime_partial:A_BomoMG_comp40902_c1_seq16
558bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7139 O_BomoMG2224_internal:A_BomoMG_comp21512_c0_seq1
109bp
 PREDICTED:_probable_ATP-dependent_RNA_helicase_DDX27_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0042254 P ribosome biogenesis
GO:0044822 F RNA binding
7140 O_BomoMG22251_3prime_partial:A_BomoMG_comp40902_c1_seq17
285bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
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