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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
691 O_BomoMG11060_5prime_partial:A_BomoMG_comp38547_c0_seq1
262bp
 PREDICTED:_septin-2_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007049 P cell cycle
GO:0008021 C synaptic vesicle
GO:0017157 P regulation of exocytosis
GO:0019003 F GDP binding
GO:0019905 F syntaxin binding
GO:0031105 C septin complex
GO:0032154 C cleavage furrow
GO:0035091 F phosphatidylinositol binding
GO:0042803 F protein homodimerization activity
GO:0043195 C terminal bouton
GO:0045921 P positive regulation of exocytosis
GO:0051301 P cell division
692 O_BomoMG11062_3prime_partial:A_BomoMG_comp38547_c0_seq2
151bp
 PREDICTED:_septin-2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0002036 P regulation of L-glutamate import across plasma membrane
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007224 P smoothened signaling pathway
GO:0009986 C cell surface
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030234 F enzyme regulator activity
GO:0030496 C midbody
GO:0032154 C cleavage furrow
GO:0032880 P regulation of protein localization
GO:0032947 F molecular adaptor activity
GO:0035869 C ciliary transition zone
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0043209 C myelin sheath
GO:0045202 C synapse
GO:0050790 P regulation of catalytic activity
GO:0051301 P cell division
GO:0060170 C ciliary membrane
GO:0070062 C extracellular exosome
693 O_BomoMG11063_internal:A_BomoMG_comp38547_c0_seq3
135bp
 PREDICTED:_septin-2_[Amyelois_transitella]
GO:0000145 C exocyst
GO:0000166 F nucleotide binding
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0002036 P regulation of L-glutamate import across plasma membrane
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005930 C axoneme
GO:0005938 C cell cortex
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007224 P smoothened signaling pathway
GO:0009986 C cell surface
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030234 F enzyme regulator activity
GO:0030496 C midbody
GO:0031105 C septin complex
GO:0031175 P neuron projection development
GO:0031513 C non-motile cilium
GO:0032154 C cleavage furrow
GO:0032391 C photoreceptor connecting cilium
GO:0032880 P regulation of protein localization
GO:0032947 F molecular adaptor activity
GO:0035869 C ciliary transition zone
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0043209 C myelin sheath
GO:0045202 C synapse
GO:0048471 C perinuclear region of cytoplasm
GO:0050790 P regulation of catalytic activity
GO:0051301 P cell division
GO:0060170 C ciliary membrane
GO:0070062 C extracellular exosome
694 O_BomoMG11064_internal:A_BomoMG_comp38547_c0_seq4
115bp
 PREDICTED:_septin-5_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000910 P cytokinesis
GO:0003924 F GTPase activity
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0007049 P cell cycle
GO:0008021 C synaptic vesicle
GO:0016080 P synaptic vesicle targeting
GO:0017157 P regulation of exocytosis
GO:0019905 F syntaxin binding
GO:0043195 C terminal bouton
GO:0043679 C axon terminus
GO:0045202 C synapse
GO:0045921 P positive regulation of exocytosis
GO:0051301 P cell division
GO:2000300 P regulation of synaptic vesicle exocytosis
695 O_BomoMG11065_internal:A_BomoMG_comp38547_c0_seq5
101bp
 PREDICTED:_septin-5_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0008021 C synaptic vesicle
GO:0017157 P regulation of exocytosis
GO:0051301 P cell division
696 O_BomoMG11066_complete:A_BomoMG_comp38549_c0_seq1
343bp
 PREDICTED:_four_and_a_half_LIM_domains_protein_2-like_isoform_X3_[Amyelois_transitella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001649 P osteoblast differentiation
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005925 C focal adhesion
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0009725 P response to hormone
GO:0015629 C actin cytoskeleton
GO:0042802 F identical protein binding
GO:0043066 P negative regulation of apoptotic process
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0055014 P atrial cardiac muscle cell development
GO:0055015 P ventricular cardiac muscle cell development
GO:0060347 P heart trabecula formation
697 O_BomoMG11070_5prime_partial:A_BomoMG_comp38549_c0_seq2
407bp
 PREDICTED:_protein_espinas-like_isoform_X1_[Amyelois_transitella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001649 P osteoblast differentiation
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005925 C focal adhesion
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0009725 P response to hormone
GO:0015629 C actin cytoskeleton
GO:0042802 F identical protein binding
GO:0043066 P negative regulation of apoptotic process
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0055014 P atrial cardiac muscle cell development
GO:0055015 P ventricular cardiac muscle cell development
GO:0060347 P heart trabecula formation
698 O_BomoMG11074_3prime_partial:A_BomoMG_comp38549_c0_seq3
146bp
 PREDICTED:_four_and_a_half_LIM_domains_protein_2-like_isoform_X2_[Papilio_polytes]
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
699 O_BomoMG11075_3prime_partial:A_BomoMG_comp38549_c0_seq5
163bp
 Protein_espinas_[Papilio_machaon]
700 O_BomoMG11077_complete:A_BomoMG_comp38553_c0_seq2
132bp
 PREDICTED:_beta_carbonic_anhydrase_1_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004089 F carbonate dehydratase activity
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016829 F lyase activity
GO:0046872 F metal ion binding
701 O_BomoMG11078_complete:A_BomoMG_comp38553_c0_seq3
255bp
 PREDICTED:_beta_carbonic_anhydrase_1_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004089 F carbonate dehydratase activity
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016829 F lyase activity
GO:0046872 F metal ion binding
702 O_BomoMG11079_complete:A_BomoMG_comp38554_c0_seq1
774bp
 PREDICTED:_AFG3-like_protein_2_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0004176 F ATP-dependent peptidase activity
GO:0004222 F metalloendopeptidase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006461 P protein-containing complex assembly
GO:0006508 P proteolysis
GO:0007005 P mitochondrion organization
GO:0007409 P axonogenesis
GO:0007528 P neuromuscular junction development
GO:0008053 P mitochondrial fusion
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0021675 P nerve development
GO:0031966 C mitochondrial membrane
GO:0034982 P mitochondrial protein processing
GO:0040014 P regulation of multicellular organism growth
GO:0042407 P cristae formation
GO:0042552 P myelination
GO:0045041 P protein import into mitochondrial intermembrane space
GO:0046872 F metal ion binding
GO:0048747 P muscle cell development
GO:0060013 P righting reflex
703 O_BomoMG1107_complete:A_BomoMG_comp19855_c0_seq2
279bp
 PREDICTED:_la_protein_homolog_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0030529 C ribonucleoprotein complex
704 O_BomoMG11081_3prime_partial:A_BomoMG_comp38555_c0_seq1
445bp
 PREDICTED:_negative_elongation_factor_D_[Amyelois_transitella]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007070 P obsolete negative regulation of transcription from RNA polymerase II promoter during mitotic cell cycle
GO:0008023 C transcription elongation factor complex
GO:0017053 C transcription repressor complex
GO:0022008 P neurogenesis
GO:0032021 C NELF complex
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045892 P negative regulation of transcription, DNA-templated
705 O_BomoMG11083_5prime_partial:A_BomoMG_comp38555_c0_seq2
140bp
 Negative_elongation_factor_D_[Papilio_machaon]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007070 P obsolete negative regulation of transcription from RNA polymerase II promoter during mitotic cell cycle
GO:0008023 C transcription elongation factor complex
GO:0017053 C transcription repressor complex
GO:0022008 P neurogenesis
GO:0032021 C NELF complex
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045892 P negative regulation of transcription, DNA-templated
706 O_BomoMG11084_complete:A_BomoMG_comp38555_c0_seq3
142bp
 Negative_elongation_factor_D_[Papilio_machaon]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007070 P obsolete negative regulation of transcription from RNA polymerase II promoter during mitotic cell cycle
GO:0008023 C transcription elongation factor complex
GO:0017053 C transcription repressor complex
GO:0022008 P neurogenesis
GO:0032021 C NELF complex
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045892 P negative regulation of transcription, DNA-templated
707 O_BomoMG11085_3prime_partial:A_BomoMG_comp38555_c0_seq4
445bp
 PREDICTED:_negative_elongation_factor_D_[Amyelois_transitella]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007070 P obsolete negative regulation of transcription from RNA polymerase II promoter during mitotic cell cycle
GO:0008023 C transcription elongation factor complex
GO:0017053 C transcription repressor complex
GO:0022008 P neurogenesis
GO:0032021 C NELF complex
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045892 P negative regulation of transcription, DNA-templated
708 O_BomoMG11087_5prime_partial:A_BomoMG_comp38556_c0_seq1
681bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
709 O_BomoMG11089_complete:A_BomoMG_comp38560_c0_seq1
133bp
 PREDICTED:_periodic_tryptophan_protein_1_homolog_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005794 C Golgi apparatus
GO:0034773 P histone H4-K20 trimethylation
GO:1903262 P negative regulation of peptidyl-serine phosphorylation of STAT protein
GO:1990889 F H4K20me3 modified histone binding
GO:2000738 P positive regulation of stem cell differentiation
710 O_BomoMG1108_5prime_partial:A_BomoMG_comp19870_c0_seq1
319bp
 PREDICTED:_transcriptional_activator_protein_Pur-alpha_isoform_X2_[Bombyx_mori]
GO:0000784 C chromosome, telomeric region
GO:0000900 F translation repressor activity, mRNA regulatory element binding
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003691 F double-stranded telomeric DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005662 C DNA replication factor A complex
GO:0005737 C cytoplasm
GO:0006268 P DNA unwinding involved in DNA replication
GO:0006270 P DNA replication initiation
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007399 P nervous system development
GO:0008134 F transcription factor binding
GO:0008284 P positive regulation of cell population proliferation
GO:0017148 P negative regulation of translation
GO:0030154 P cell differentiation
GO:0030425 C dendrite
GO:0032422 F purine-rich negative regulatory element binding
GO:0042127 P regulation of cell population proliferation
GO:0043025 C neuronal cell body
GO:0044822 F RNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046332 F SMAD binding
711 O_BomoMG11090_5prime_partial:A_BomoMG_comp38560_c0_seq2
165bp
 PREDICTED:_periodic_tryptophan_protein_1_homolog_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005794 C Golgi apparatus
GO:0034773 P histone H4-K20 trimethylation
GO:1903262 P negative regulation of peptidyl-serine phosphorylation of STAT protein
GO:1990889 F H4K20me3 modified histone binding
GO:2000738 P positive regulation of stem cell differentiation
712 O_BomoMG11091_complete:A_BomoMG_comp38561_c0_seq1
311bp
 Peroxisomal_targeting_signal_2_receptor_[Papilio_xuthus]
GO:0001764 P neuron migration
GO:0001958 P endochondral ossification
GO:0005053 F peroxisome matrix targeting signal-2 binding
GO:0005737 C cytoplasm
GO:0005777 C peroxisome
GO:0005782 C peroxisomal matrix
GO:0005829 C cytosol
GO:0006625 P protein targeting to peroxisome
GO:0006635 P fatty acid beta-oxidation
GO:0006810 P transport
GO:0007031 P peroxisome organization
GO:0008611 P ether lipid biosynthetic process
GO:0015031 P protein transport
GO:0016558 P protein import into peroxisome matrix
GO:0019899 F enzyme binding
GO:0042803 F protein homodimerization activity
713 O_BomoMG11092_internal:A_BomoMG_comp38562_c0_seq1
284bp
 PREDICTED:_uncharacterized_protein_LOC105395455_[Plutella_xylostella]
714 O_BomoMG11094_3prime_partial:A_BomoMG_comp38562_c0_seq2
684bp
 PREDICTED:_uncharacterized_protein_LOC105395459_[Plutella_xylostella]
715 O_BomoMG11095_internal:A_BomoMG_comp38563_c0_seq1
263bp
 mitochondrial_import_inner_membrane_translocase_subunit_TIM50-C_precursor_[Danaus_plexippus]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005744 C TIM23 mitochondrial import inner membrane translocase complex
GO:0006470 P protein dephosphorylation
GO:0006810 P transport
GO:0007005 P mitochondrion organization
GO:0007006 P mitochondrial membrane organization
GO:0007067 P mitotic cell cycle
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019233 P sensory perception of pain
GO:0030150 P protein import into mitochondrial matrix
GO:0035335 P peptidyl-tyrosine dephosphorylation
716 O_BomoMG11096_5prime_partial:A_BomoMG_comp38563_c0_seq2
156bp
 PREDICTED:_mitochondrial_import_inner_membrane_translocase_subunit_TIM50-C-like_[Papilio_xuthus]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005744 C TIM23 mitochondrial import inner membrane translocase complex
GO:0006470 P protein dephosphorylation
GO:0006810 P transport
GO:0007005 P mitochondrion organization
GO:0007006 P mitochondrial membrane organization
GO:0007067 P mitotic cell cycle
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019233 P sensory perception of pain
GO:0030150 P protein import into mitochondrial matrix
GO:0035335 P peptidyl-tyrosine dephosphorylation
717 O_BomoMG11097_3prime_partial:A_BomoMG_comp38565_c0_seq1
807bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_protein_tiptop-like_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007380 P specification of segmental identity, head
GO:0010468 P regulation of gene expression
GO:0046872 F metal ion binding
GO:0048730 P epidermis morphogenesis
GO:0048749 P compound eye development
GO:0061330 P Malpighian tubule stellate cell differentiation
718 O_BomoMG11099_5prime_partial:A_BomoMG_comp38565_c0_seq2
208bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_protein_tiptop-like_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007380 P specification of segmental identity, head
GO:0010468 P regulation of gene expression
GO:0046872 F metal ion binding
GO:0048730 P epidermis morphogenesis
GO:0048749 P compound eye development
GO:0061330 P Malpighian tubule stellate cell differentiation
719 O_BomoMG110_internal:A_BomoMG_comp17209_c0_seq1
169bp
 PREDICTED:_transformation/transcription_domain-associated_protein_[Bombyx_mori]
GO:0000123 C histone acetyltransferase complex
GO:0000124 C SAGA complex
GO:0000281 P mitotic cytokinesis
GO:0004402 F histone acetyltransferase activity
GO:0004672 F protein kinase activity
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0005737 C cytoplasm
GO:0005875 C microtubule associated complex
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006909 P phagocytosis
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0035222 P wing disc pattern formation
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0043486 P histone exchange
GO:0043966 P histone H3 acetylation
GO:0045747 P positive regulation of Notch signaling pathway
720 O_BomoMG11100_internal:A_BomoMG_comp38566_c0_seq1
209bp
 hypothetical_protein_KGM_07331_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0008150 P biological_process
GO:0030014 C CCR4-NOT complex
GO:0031047 P gene silencing by RNA
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