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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
631 O_BomoMG10976_5prime_partial:A_BomoMG_comp38520_c1_seq2
807bp
 PREDICTED:_putative_uncharacterized_protein_DDB_G0282133_[Amyelois_transitella]
632 O_BomoMG10977_internal:A_BomoMG_comp38520_c1_seq3
629bp
 PREDICTED:_MATH_and_LRR_domain-containing_protein_PFE0570w-like_[Papilio_xuthus]
633 O_BomoMG10978_5prime_partial:A_BomoMG_comp38520_c1_seq4
627bp
 PREDICTED:_MATH_and_LRR_domain-containing_protein_PFE0570w-like_[Papilio_xuthus]
634 O_BomoMG10979_complete:A_BomoMG_comp38521_c0_seq1
473bp
 PREDICTED:_uncharacterized_protein_LOC106130280_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0001525 P angiogenesis
GO:0002044 P blood vessel endothelial cell migration involved in intussusceptive angiogenesis
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005637 C nuclear inner membrane
GO:0005639 C integral component of nuclear inner membrane
GO:0006997 P nucleus organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0030514 P negative regulation of BMP signaling pathway
GO:0032926 P negative regulation of activin receptor signaling pathway
GO:0035914 P skeletal muscle cell differentiation
GO:0051726 P regulation of cell cycle
GO:1903053 P regulation of extracellular matrix organization
635 O_BomoMG1097_complete:A_BomoMG_comp19838_c0_seq1
132bp
 PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_10_[Papilio_polytes]
GO:0001104 F transcription coregulator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016592 C mediator complex
GO:0070847 C core mediator complex
636 O_BomoMG10980_complete:A_BomoMG_comp38521_c0_seq1
304bp
 PREDICTED:_uncharacterized_protein_LOC106130280_[Amyelois_transitella]
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005637 C nuclear inner membrane
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0008134 F transcription factor binding
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030513 P positive regulation of BMP signaling pathway
GO:0030718 P germ-line stem cell population maintenance
GO:0031468 P nuclear membrane reassembly
GO:0031965 C nuclear membrane
GO:0034399 C nuclear periphery
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0048132 P female germ-line stem cell asymmetric division
GO:0048477 P oogenesis
637 O_BomoMG10981_internal:A_BomoMG_comp38522_c0_seq1
308bp
 PREDICTED:_twitchin_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0018107 P peptidyl-threonine phosphorylation
GO:0031672 C A band
GO:0046872 F metal ion binding
GO:0051782 P negative regulation of cell division
638 O_BomoMG10983_internal:A_BomoMG_comp38522_c0_seq2
1038bp
 PREDICTED:_twitchin_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0018107 P peptidyl-threonine phosphorylation
GO:0031672 C A band
GO:0046872 F metal ion binding
GO:0051782 P negative regulation of cell division
639 O_BomoMG10987_complete:A_BomoMG_comp38523_c0_seq1
171bp
 PREDICTED:_diamine_acetyltransferase_2-like_[Bombyx_mori]
GO:0004145 F diamine N-acetyltransferase activity
GO:0005737 C cytoplasm
GO:0008080 F N-acetyltransferase activity
GO:0009447 P putrescine catabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
640 O_BomoMG10988_complete:A_BomoMG_comp38523_c0_seq2
171bp
 PREDICTED:_diamine_acetyltransferase_2-like_[Bombyx_mori]
GO:0004145 F diamine N-acetyltransferase activity
GO:0005737 C cytoplasm
GO:0008080 F N-acetyltransferase activity
GO:0009447 P putrescine catabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
641 O_BomoMG10989_internal:A_BomoMG_comp38524_c0_seq1
682bp
 PREDICTED:_microtubule-actin_cross-linking_factor_1,_isoforms_1/2/3/5_[Amyelois_transitella]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0007050 P regulation of cell cycle
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0010632 P regulation of epithelial cell migration
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016887 F ATP hydrolysis activity
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0032587 C ruffle membrane
GO:0032886 P regulation of microtubule-based process
GO:0042060 P wound healing
GO:0042995 C cell projection
GO:0043001 P Golgi to plasma membrane protein transport
GO:0044822 F RNA binding
GO:0045773 P positive regulation of axon extension
GO:0046872 F metal ion binding
GO:0051015 F actin filament binding
GO:0051893 P regulation of focal adhesion assembly
642 O_BomoMG1098_3prime_partial:A_BomoMG_comp19842_c0_seq1
435bp
 PREDICTED:_C2_domain-containing_protein_5_isoform_X2_[Amyelois_transitella]
GO:0001726 C ruffle
GO:0005509 F calcium ion binding
GO:0005544 F calcium-dependent phospholipid binding
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0006810 P transport
GO:0006906 P vesicle fusion
GO:0008289 F lipid binding
GO:0010828 P positive regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0031340 P positive regulation of vesicle fusion
GO:0031410 C cytoplasmic vesicle
GO:0032587 C ruffle membrane
GO:0032869 P cellular response to insulin stimulus
GO:0038028 P insulin receptor signaling pathway via phosphatidylinositol 3-kinase
GO:0042995 C cell projection
GO:0065002 P intracellular protein transmembrane transport
GO:0072659 P protein localization to plasma membrane
GO:0090314 P positive regulation of protein targeting to membrane
GO:2001275 P obsolete positive regulation of glucose import in response to insulin stimulus
643 O_BomoMG10992_internal:A_BomoMG_comp38524_c1_seq1
247bp
 Dystonin_[Operophtera_brumata]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0005925 C focal adhesion
GO:0008092 F cytoskeletal protein binding
GO:0008307 F structural constituent of muscle
GO:0016528 C sarcoplasm
GO:0030054 C cell junction
GO:0030056 C hemidesmosome
GO:0030506 F ankyrin binding
GO:0031581 P hemidesmosome assembly
GO:0042383 C sarcolemma
GO:0043034 C costamere
GO:0043292 C contractile fiber
GO:0044822 F RNA binding
GO:0045111 C intermediate filament cytoskeleton
GO:0070062 C extracellular exosome
644 O_BomoMG10993_internal:A_BomoMG_comp38524_c2_seq1
118bp
 PREDICTED:_microtubule-actin_cross-linking_factor_1,_isoforms_1/2/3/5_[Amyelois_transitella]
645 O_BomoMG10994_internal:A_BomoMG_comp38524_c3_seq1
131bp
646 O_BomoMG10995_internal:A_BomoMG_comp38524_c4_seq1
1139bp
 Dystonin_[Operophtera_brumata]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0005925 C focal adhesion
GO:0008092 F cytoskeletal protein binding
GO:0008307 F structural constituent of muscle
GO:0016528 C sarcoplasm
GO:0030054 C cell junction
GO:0030056 C hemidesmosome
GO:0030506 F ankyrin binding
GO:0031581 P hemidesmosome assembly
GO:0042383 C sarcolemma
GO:0043034 C costamere
GO:0043292 C contractile fiber
GO:0044822 F RNA binding
GO:0045111 C intermediate filament cytoskeleton
GO:0070062 C extracellular exosome
647 O_BomoMG10997_3prime_partial:A_BomoMG_comp38525_c0_seq1
423bp
 PREDICTED:_valine--tRNA_ligase_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004832 F valine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006438 P valyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
648 O_BomoMG10999_5prime_partial:A_BomoMG_comp38525_c0_seq2
623bp
 PREDICTED:_valine--tRNA_ligase_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004832 F valine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006438 P valyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
649 O_BomoMG11001_complete:A_BomoMG_comp38526_c0_seq1
162bp
 PREDICTED:_uncharacterized_protein_LOC105841395_isoform_X1_[Bombyx_mori]
650 O_BomoMG11002_complete:A_BomoMG_comp38526_c0_seq3
162bp
 PREDICTED:_uncharacterized_protein_LOC105841395_isoform_X1_[Bombyx_mori]
651 O_BomoMG11003_3prime_partial:A_BomoMG_comp38527_c0_seq1
116bp
 PREDICTED:_unconventional_myosin-IXa-like_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0007165 P signal transduction
GO:0007601 P visual perception
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016459 C myosin complex
GO:0016461 C unconventional myosin complex
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
GO:0051056 P regulation of small GTPase mediated signal transduction
652 O_BomoMG11004_internal:A_BomoMG_comp38527_c0_seq2
325bp
 PREDICTED:_unconventional_myosin-IXa-like_isoform_X4_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003774 F cytoskeletal motor activity
GO:0005096 F GTPase activator activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016459 C myosin complex
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
653 O_BomoMG11006_internal:A_BomoMG_comp38527_c0_seq3
282bp
 PREDICTED:_unconventional_myosin-IXa-like_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003774 F cytoskeletal motor activity
GO:0005096 F GTPase activator activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016459 C myosin complex
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
654 O_BomoMG11007_complete:A_BomoMG_comp38528_c0_seq1
343bp
 PREDICTED:_polymerase_delta-interacting_protein_2_[Plutella_xylostella]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0016242 P negative regulation of macroautophagy
GO:0030674 F protein-macromolecule adaptor activity
GO:0042645 C mitochondrial nucleoid
GO:0045931 P positive regulation of mitotic cell cycle
GO:0070584 P mitochondrion morphogenesis
655 O_BomoMG11009_internal:A_BomoMG_comp38529_c0_seq1
358bp
 PREDICTED:_glycylpeptide_N-tetradecanoyltransferase_2_[Amyelois_transitella]
GO:0004379 F glycylpeptide N-tetradecanoyltransferase activity
GO:0005737 C cytoplasm
GO:0006499 P N-terminal protein myristoylation
GO:0007391 P dorsal closure
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0018008 P N-terminal peptidyl-glycine N-myristoylation
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
656 O_BomoMG1100_internal:A_BomoMG_comp19843_c0_seq1
100bp
 PREDICTED:_wiskott-Aldrich_syndrome_protein_family_member_2_[Bombyx_mori]
657 O_BomoMG11011_complete:A_BomoMG_comp38530_c0_seq1
324bp
 PREDICTED:_putative_ATP-dependent_RNA_helicase_DHX30_[Bombyx_mori]
658 O_BomoMG11012_complete:A_BomoMG_comp38530_c0_seq3
933bp
 PREDICTED:_putative_ATP-dependent_RNA_helicase_DHX30_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006396 P RNA processing
GO:0008026 F helicase activity
GO:0016787 F hydrolase activity
GO:0042254 P ribosome biogenesis
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
659 O_BomoMG11017_complete:A_BomoMG_comp38532_c0_seq1
199bp
 double-stranded_RNA-binding_zinc_finger_protein_JAZ_[Bombyx_mori]
660 O_BomoMG11018_complete:A_BomoMG_comp38532_c0_seq1
155bp
 double-stranded_RNA-binding_zinc_finger_protein_JAZ_[Bombyx_mori]
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