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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5341 O_BomoMG18990_5prime_partial:A_BomoMG_comp40556_c0_seq1
1080bp
GO:0004672 F protein kinase activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0017048 F small GTPase binding
GO:0019902 F phosphatase binding
GO:0030241 P skeletal muscle myosin thick filament assembly
GO:0031034 P myosin filament assembly
GO:0031430 C M band
GO:0031672 C A band
GO:0035023 P regulation of Rho protein signal transduction
GO:0043547 P positive regulation of GTPase activity
5342 O_BomoMG18996_5prime_partial:A_BomoMG_comp40556_c0_seq2
254bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004683 F calmodulin-dependent protein kinase activity
GO:0004687 F myosin light chain kinase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0006941 P striated muscle contraction
GO:0007274 P neuromuscular synaptic transmission
GO:0010628 P positive regulation of gene expression
GO:0014816 P skeletal muscle satellite cell differentiation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018107 P peptidyl-threonine phosphorylation
GO:0030017 C sarcomere
GO:0032971 P regulation of muscle filament sliding
GO:0035914 P skeletal muscle cell differentiation
GO:0046777 P protein autophosphorylation
GO:0055008 P cardiac muscle tissue morphogenesis
GO:0060048 P cardiac muscle contraction
5343 O_BomoMG18998_5prime_partial:A_BomoMG_comp40556_c0_seq3
569bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019899 F enzyme binding
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0050773 P regulation of dendrite development
5344 O_BomoMG189_internal:A_BomoMG_comp17419_c1_seq1
265bp
 PREDICTED:_uncharacterized_protein_LOC101735966_[Bombyx_mori]
5345 O_BomoMG18_internal:A_BomoMG_comp16911_c0_seq1
251bp
 PREDICTED:_RNA-binding_protein_48_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0005654 C nucleoplasm
5346 O_BomoMG19004_3prime_partial:A_BomoMG_comp40558_c0_seq1
179bp
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004371 F glycerone kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006071 P glycerol metabolic process
GO:0008152 P metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016829 F lyase activity
GO:0034012 F FAD-AMP lyase (cyclizing) activity
GO:0039534 P negative regulation of MDA-5 signaling pathway
GO:0044262 P cellular carbohydrate metabolic process
GO:0045088 P regulation of innate immune response
GO:0046835 P carbohydrate phosphorylation
GO:0046872 F metal ion binding
GO:0050354 F triokinase activity
GO:0061624 P fructose catabolic process to hydroxyacetone phosphate and glyceraldehyde-3-phosphate
GO:0061625 P glycolytic process through fructose-1-phosphate
GO:0070062 C extracellular exosome
5347 O_BomoMG19006_5prime_partial:A_BomoMG_comp40558_c0_seq2
411bp
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004371 F glycerone kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006071 P glycerol metabolic process
GO:0008152 P metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016829 F lyase activity
GO:0034012 F FAD-AMP lyase (cyclizing) activity
GO:0039534 P negative regulation of MDA-5 signaling pathway
GO:0044262 P cellular carbohydrate metabolic process
GO:0045087 P innate immune response
GO:0045088 P regulation of innate immune response
GO:0046835 P carbohydrate phosphorylation
GO:0046872 F metal ion binding
GO:0050354 F triokinase activity
GO:0061624 P fructose catabolic process to hydroxyacetone phosphate and glyceraldehyde-3-phosphate
GO:0070062 C extracellular exosome
5348 O_BomoMG19008_complete:A_BomoMG_comp40558_c0_seq3
392bp
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004371 F glycerone kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006071 P glycerol metabolic process
GO:0008152 P metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016829 F lyase activity
GO:0034012 F FAD-AMP lyase (cyclizing) activity
GO:0039534 P negative regulation of MDA-5 signaling pathway
GO:0044262 P cellular carbohydrate metabolic process
GO:0045087 P innate immune response
GO:0045088 P regulation of innate immune response
GO:0046835 P carbohydrate phosphorylation
GO:0046872 F metal ion binding
GO:0050354 F triokinase activity
GO:0061624 P fructose catabolic process to hydroxyacetone phosphate and glyceraldehyde-3-phosphate
GO:0070062 C extracellular exosome
5349 O_BomoMG19010_5prime_partial:A_BomoMG_comp40559_c0_seq1
584bp
GO:0000139 C Golgi membrane
GO:0003824 F catalytic activity
GO:0004630 F phospholipase D activity
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006629 P lipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0006655 P phosphatidylglycerol biosynthetic process
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016042 P lipid catabolic process
GO:0016324 C apical plasma membrane
GO:0016787 F hydrolase activity
GO:0030139 C endocytic vesicle
GO:0030334 P regulation of cell migration
GO:0031902 C late endosome membrane
GO:0032534 P regulation of microvillus assembly
GO:0035091 F phosphatidylinositol binding
GO:0048017 P inositol lipid-mediated signaling
GO:0048471 C perinuclear region of cytoplasm
GO:0048870 P cell motility
GO:0050764 P regulation of phagocytosis
GO:0050830 P defense response to Gram-positive bacterium
GO:0070290 F N-acylphosphatidylethanolamine-specific phospholipase D activity
5350 O_BomoMG19011_complete:A_BomoMG_comp40559_c0_seq1
551bp
GO:0000139 C Golgi membrane
GO:0003824 F catalytic activity
GO:0004630 F phospholipase D activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006629 P lipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0006935 P chemotaxis
GO:0007264 P small GTPase mediated signal transduction
GO:0007265 P Ras protein signal transduction
GO:0016020 C membrane
GO:0016042 P lipid catabolic process
GO:0016324 C apical plasma membrane
GO:0016787 F hydrolase activity
GO:0030139 C endocytic vesicle
GO:0030334 P regulation of cell migration
GO:0031902 C late endosome membrane
GO:0032534 P regulation of microvillus assembly
GO:0035091 F phosphatidylinositol binding
GO:0048017 P inositol lipid-mediated signaling
GO:0048471 C perinuclear region of cytoplasm
GO:0048870 P cell motility
GO:0050764 P regulation of phagocytosis
GO:0070290 F N-acylphosphatidylethanolamine-specific phospholipase D activity
5351 O_BomoMG19014_complete:A_BomoMG_comp40559_c0_seq3
551bp
GO:0000139 C Golgi membrane
GO:0003824 F catalytic activity
GO:0004630 F phospholipase D activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006629 P lipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0006935 P chemotaxis
GO:0007264 P small GTPase mediated signal transduction
GO:0007265 P Ras protein signal transduction
GO:0016020 C membrane
GO:0016042 P lipid catabolic process
GO:0016324 C apical plasma membrane
GO:0016787 F hydrolase activity
GO:0030139 C endocytic vesicle
GO:0030334 P regulation of cell migration
GO:0031902 C late endosome membrane
GO:0032534 P regulation of microvillus assembly
GO:0035091 F phosphatidylinositol binding
GO:0048017 P inositol lipid-mediated signaling
GO:0048471 C perinuclear region of cytoplasm
GO:0048870 P cell motility
GO:0050764 P regulation of phagocytosis
GO:0070290 F N-acylphosphatidylethanolamine-specific phospholipase D activity
5352 O_BomoMG19016_complete:A_BomoMG_comp40559_c0_seq3
258bp
GO:0001666 P response to hypoxia
GO:0003824 F catalytic activity
GO:0004630 F phospholipase D activity
GO:0005080 F protein kinase C binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005901 C caveola
GO:0006629 P lipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0009395 P phospholipid catabolic process
GO:0014068 P positive regulation of phosphatidylinositol 3-kinase signaling
GO:0014070 P response to organic cyclic compound
GO:0016020 C membrane
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0030027 C lamellipodium
GO:0030334 P regulation of cell migration
GO:0030335 P positive regulation of cell migration
GO:0031175 P neuron projection development
GO:0035091 F phosphatidylinositol binding
GO:0036465 P synaptic vesicle recycling
GO:0042383 C sarcolemma
GO:0042542 P response to hydrogen peroxide
GO:0043306 P positive regulation of mast cell degranulation
GO:0043434 P response to peptide hormone
GO:0045785 P positive regulation of cell adhesion
GO:0048017 P inositol lipid-mediated signaling
GO:0048260 P positive regulation of receptor-mediated endocytosis
GO:0050764 P regulation of phagocytosis
GO:0070290 F N-acylphosphatidylethanolamine-specific phospholipase D activity
GO:0098793 C presynapse
5353 O_BomoMG19017_complete:A_BomoMG_comp40559_c0_seq4
929bp
GO:0000139 C Golgi membrane
GO:0003824 F catalytic activity
GO:0004630 F phospholipase D activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006629 P lipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0008654 P phospholipid biosynthetic process
GO:0009395 P phospholipid catabolic process
GO:0016020 C membrane
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0030027 C lamellipodium
GO:0030334 P regulation of cell migration
GO:0030335 P positive regulation of cell migration
GO:0031902 C late endosome membrane
GO:0031982 C vesicle
GO:0031985 C Golgi cisterna
GO:0032534 P regulation of microvillus assembly
GO:0035091 F phosphatidylinositol binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0043434 P response to peptide hormone
GO:0048017 P inositol lipid-mediated signaling
GO:0048471 C perinuclear region of cytoplasm
GO:0050764 P regulation of phagocytosis
GO:0070290 F N-acylphosphatidylethanolamine-specific phospholipase D activity
5354 O_BomoMG19019_complete:A_BomoMG_comp40559_c0_seq5
908bp
GO:0000139 C Golgi membrane
GO:0003824 F catalytic activity
GO:0004630 F phospholipase D activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006629 P lipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0008654 P phospholipid biosynthetic process
GO:0009395 P phospholipid catabolic process
GO:0016020 C membrane
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0030027 C lamellipodium
GO:0030334 P regulation of cell migration
GO:0030335 P positive regulation of cell migration
GO:0031902 C late endosome membrane
GO:0031982 C vesicle
GO:0031985 C Golgi cisterna
GO:0032534 P regulation of microvillus assembly
GO:0035091 F phosphatidylinositol binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0043434 P response to peptide hormone
GO:0048017 P inositol lipid-mediated signaling
GO:0048471 C perinuclear region of cytoplasm
GO:0050764 P regulation of phagocytosis
GO:0070290 F N-acylphosphatidylethanolamine-specific phospholipase D activity
5355 O_BomoMG1901_internal:A_BomoMG_comp20971_c0_seq1
119bp
 rRNA_processing_protein_Ebp2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030687 C preribosome, large subunit precursor
GO:0034399 C nuclear periphery
GO:0042254 P ribosome biogenesis
GO:0042273 P ribosomal large subunit biogenesis
5356 O_BomoMG19021_complete:A_BomoMG_comp40559_c0_seq6
551bp
GO:0000139 C Golgi membrane
GO:0003824 F catalytic activity
GO:0004630 F phospholipase D activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006629 P lipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0006935 P chemotaxis
GO:0007264 P small GTPase mediated signal transduction
GO:0007265 P Ras protein signal transduction
GO:0016020 C membrane
GO:0016042 P lipid catabolic process
GO:0016324 C apical plasma membrane
GO:0016787 F hydrolase activity
GO:0030139 C endocytic vesicle
GO:0030334 P regulation of cell migration
GO:0031902 C late endosome membrane
GO:0032534 P regulation of microvillus assembly
GO:0035091 F phosphatidylinositol binding
GO:0048017 P inositol lipid-mediated signaling
GO:0048471 C perinuclear region of cytoplasm
GO:0048870 P cell motility
GO:0050764 P regulation of phagocytosis
GO:0070290 F N-acylphosphatidylethanolamine-specific phospholipase D activity
5357 O_BomoMG19023_complete:A_BomoMG_comp40559_c0_seq6
279bp
GO:0002031 P G protein-coupled receptor internalization
GO:0003824 F catalytic activity
GO:0004630 F phospholipase D activity
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0006655 P phosphatidylglycerol biosynthetic process
GO:0006898 P receptor-mediated endocytosis
GO:0016020 C membrane
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0030334 P regulation of cell migration
GO:0031526 C brush border membrane
GO:0035091 F phosphatidylinositol binding
GO:0036465 P synaptic vesicle recycling
GO:0048017 P inositol lipid-mediated signaling
GO:0048870 P cell motility
GO:0050764 P regulation of phagocytosis
GO:0070290 F N-acylphosphatidylethanolamine-specific phospholipase D activity
GO:0098793 C presynapse
5358 O_BomoMG19024_5prime_partial:A_BomoMG_comp40559_c0_seq7
1234bp
GO:0000139 C Golgi membrane
GO:0003824 F catalytic activity
GO:0004630 F phospholipase D activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006629 P lipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0008654 P phospholipid biosynthetic process
GO:0009395 P phospholipid catabolic process
GO:0016020 C membrane
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0030027 C lamellipodium
GO:0030334 P regulation of cell migration
GO:0030335 P positive regulation of cell migration
GO:0031902 C late endosome membrane
GO:0031982 C vesicle
GO:0031985 C Golgi cisterna
GO:0032534 P regulation of microvillus assembly
GO:0035091 F phosphatidylinositol binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0043434 P response to peptide hormone
GO:0048017 P inositol lipid-mediated signaling
GO:0048471 C perinuclear region of cytoplasm
GO:0050764 P regulation of phagocytosis
GO:0070290 F N-acylphosphatidylethanolamine-specific phospholipase D activity
5359 O_BomoMG19027_5prime_partial:A_BomoMG_comp40559_c0_seq8
335bp
GO:0000139 C Golgi membrane
GO:0003824 F catalytic activity
GO:0004630 F phospholipase D activity
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006629 P lipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0016020 C membrane
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0030334 P regulation of cell migration
GO:0031902 C late endosome membrane
GO:0035091 F phosphatidylinositol binding
GO:0048017 P inositol lipid-mediated signaling
GO:0048471 C perinuclear region of cytoplasm
GO:0050764 P regulation of phagocytosis
GO:0070290 F N-acylphosphatidylethanolamine-specific phospholipase D activity
5360 O_BomoMG19029_internal:A_BomoMG_comp40560_c0_seq2
718bp
GO:0000790 C chromatin
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0051382 P kinetochore assembly
5361 O_BomoMG1902_5prime_partial:A_BomoMG_comp20971_c0_seq2
225bp
 rRNA_processing_protein_Ebp2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030687 C preribosome, large subunit precursor
GO:0034399 C nuclear periphery
GO:0042254 P ribosome biogenesis
GO:0042273 P ribosomal large subunit biogenesis
5362 O_BomoMG19031_3prime_partial:A_BomoMG_comp40560_c0_seq3
344bp
5363 O_BomoMG19034_5prime_partial:A_BomoMG_comp40561_c0_seq1
477bp
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033227 P dsRNA transport
GO:0051033 F RNA transmembrane transporter activity
5364 O_BomoMG19036_3prime_partial:A_BomoMG_comp40561_c0_seq3
309bp
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033227 P dsRNA transport
GO:0051033 F RNA transmembrane transporter activity
5365 O_BomoMG19038_5prime_partial:A_BomoMG_comp40561_c0_seq4
393bp
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033227 P dsRNA transport
GO:0051033 F RNA transmembrane transporter activity
5366 O_BomoMG19039_3prime_partial:A_BomoMG_comp40562_c3_seq2
244bp
5367 O_BomoMG1903_internal:A_BomoMG_comp20971_c0_seq3
205bp
 rRNA_processing_protein_Ebp2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030687 C preribosome, large subunit precursor
GO:0034399 C nuclear periphery
GO:0042254 P ribosome biogenesis
GO:0042273 P ribosomal large subunit biogenesis
5368 O_BomoMG19040_3prime_partial:A_BomoMG_comp40562_c3_seq3
280bp
5369 O_BomoMG19042_internal:A_BomoMG_comp40562_c3_seq4
120bp
5370 O_BomoMG19043_5prime_partial:A_BomoMG_comp40562_c5_seq1
259bp
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0031047 P gene silencing by RNA
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0044822 F RNA binding
GO:1903955 P positive regulation of protein targeting to mitochondrion
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