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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5281 O_BomoMG18878_3prime_partial:A_BomoMG_comp40541_c0_seq7
230bp
GO:0005768 C endosome
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0043550 P regulation of lipid kinase activity
GO:0070772 C PAS complex
5282 O_BomoMG18880_complete:A_BomoMG_comp40541_c0_seq8
586bp
GO:0005768 C endosome
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0043550 P regulation of lipid kinase activity
GO:0070772 C PAS complex
5283 O_BomoMG18882_3prime_partial:A_BomoMG_comp40541_c0_seq9
203bp
GO:0005768 C endosome
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0043550 P regulation of lipid kinase activity
GO:0070772 C PAS complex
5284 O_BomoMG18883_5prime_partial:A_BomoMG_comp40542_c0_seq1
1224bp
GO:0000228 C nuclear chromosome
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007067 P mitotic cell cycle
GO:0008285 P negative regulation of cell population proliferation
GO:0016568 P chromatin organization
GO:0090544 C SWI/SNF superfamily-type complex
5285 O_BomoMG18887_5prime_partial:A_BomoMG_comp40542_c0_seq2
489bp
GO:0000228 C nuclear chromosome
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007067 P mitotic cell cycle
GO:0008285 P negative regulation of cell population proliferation
GO:0016568 P chromatin organization
GO:0090544 C SWI/SNF superfamily-type complex
5286 O_BomoMG18890_5prime_partial:A_BomoMG_comp40542_c0_seq3
1238bp
GO:0000228 C nuclear chromosome
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007067 P mitotic cell cycle
GO:0008285 P negative regulation of cell population proliferation
GO:0016568 P chromatin organization
GO:0090544 C SWI/SNF superfamily-type complex
5287 O_BomoMG18895_5prime_partial:A_BomoMG_comp40542_c0_seq4
1233bp
GO:0000228 C nuclear chromosome
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007067 P mitotic cell cycle
GO:0008285 P negative regulation of cell population proliferation
GO:0016568 P chromatin organization
GO:0090544 C SWI/SNF superfamily-type complex
5288 O_BomoMG18900_5prime_partial:A_BomoMG_comp40542_c0_seq5
498bp
GO:0000228 C nuclear chromosome
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007067 P mitotic cell cycle
GO:0008285 P negative regulation of cell population proliferation
GO:0016568 P chromatin organization
GO:0090544 C SWI/SNF superfamily-type complex
5289 O_BomoMG18904_5prime_partial:A_BomoMG_comp40542_c0_seq6
1229bp
GO:0000228 C nuclear chromosome
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007067 P mitotic cell cycle
GO:0008285 P negative regulation of cell population proliferation
GO:0016568 P chromatin organization
GO:0090544 C SWI/SNF superfamily-type complex
5290 O_BomoMG18908_3prime_partial:A_BomoMG_comp40542_c0_seq7
492bp
GO:0000776 C kinetochore
GO:0001890 P placenta development
GO:0001974 P blood vessel remodeling
GO:0003007 P heart morphogenesis
GO:0003349 P epicardium-derived cardiac endothelial cell differentiation
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007507 P heart development
GO:0008285 P negative regulation of cell population proliferation
GO:0016568 P chromatin organization
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0060948 P cardiac vascular smooth muscle cell development
GO:0060979 P vasculogenesis involved in coronary vascular morphogenesis
GO:0090544 C SWI/SNF superfamily-type complex
5291 O_BomoMG18909_5prime_partial:A_BomoMG_comp40542_c0_seq8
106bp
5292 O_BomoMG18910_3prime_partial:A_BomoMG_comp40543_c0_seq1
451bp
GO:0000166 F nucleotide binding
GO:0002009 P morphogenesis of an epithelium
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006468 P protein phosphorylation
GO:0007155 P cell adhesion
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0008360 P regulation of cell shape
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0040018 P positive regulation of multicellular organism growth
5293 O_BomoMG18912_5prime_partial:A_BomoMG_comp40544_c0_seq2
278bp
GO:0004843 F thiol-dependent deubiquitinase
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016020 C membrane
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0046872 F metal ion binding
5294 O_BomoMG18914_3prime_partial:A_BomoMG_comp40545_c0_seq1
1155bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005925 C focal adhesion
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0008022 F protein C-terminus binding
GO:0008150 P biological_process
GO:0070975 F FHA domain binding
5295 O_BomoMG18916_complete:A_BomoMG_comp40545_c0_seq2
319bp
5296 O_BomoMG18917_complete:A_BomoMG_comp40545_c0_seq3
1061bp
5297 O_BomoMG18919_complete:A_BomoMG_comp40545_c0_seq4
1213bp
GO:0000416 P positive regulation of histone H3-K36 methylation
GO:0001570 P vasculogenesis
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0010212 P response to ionizing radiation
GO:0016363 C nuclear matrix
GO:0030330 P DNA damage response, signal transduction by p53 class mediator
GO:0031398 P positive regulation of protein ubiquitination
GO:0035066 P positive regulation of histone acetylation
GO:0035097 C histone methyltransferase complex
GO:0043542 P endothelial cell migration
GO:0044666 C MLL3/4 complex
GO:0045830 P positive regulation of isotype switching
GO:0051568 P histone H3-K4 methylation
GO:0051571 P positive regulation of histone H3-K4 methylation
GO:0060261 P positive regulation of transcription initiation from RNA polymerase II promoter
GO:0060612 P adipose tissue development
GO:0060717 P chorion development
5298 O_BomoMG18922_3prime_partial:A_BomoMG_comp40546_c0_seq1
684bp
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0007601 P visual perception
GO:0007605 P sensory perception of sound
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016459 C myosin complex
GO:0016740 F transferase activity
GO:0030175 C filopodium
GO:0030898 F microfilament motor activity
GO:0031941 C filamentous actin
GO:0043531 F ADP binding
GO:0046777 P protein autophosphorylation
GO:0050896 P response to stimulus
GO:0060002 F plus-end directed microfilament motor activity
5299 O_BomoMG18923_internal:A_BomoMG_comp40546_c0_seq2
578bp
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0007601 P visual perception
GO:0007605 P sensory perception of sound
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016459 C myosin complex
GO:0016740 F transferase activity
GO:0030175 C filopodium
GO:0030898 F microfilament motor activity
GO:0031941 C filamentous actin
GO:0043531 F ADP binding
GO:0046777 P protein autophosphorylation
GO:0050896 P response to stimulus
GO:0060002 F plus-end directed microfilament motor activity
5300 O_BomoMG18925_internal:A_BomoMG_comp40546_c2_seq1
137bp
5301 O_BomoMG18926_internal:A_BomoMG_comp40546_c2_seq2
106bp
5302 O_BomoMG18927_complete:A_BomoMG_comp40548_c0_seq1
299bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0005743 C mitochondrial inner membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0044822 F RNA binding
GO:0070937 C CRD-mediated mRNA stability complex
GO:0070966 P nuclear-transcribed mRNA catabolic process, no-go decay
5303 O_BomoMG1892_complete:A_BomoMG_comp20964_c0_seq1
344bp
 PREDICTED:_39S_ribosomal_protein_L39,_mitochondrial_[Amyelois_transitella]
GO:0000002 P mitochondrial genome maintenance
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0004827 F proline-tRNA ligase activity
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0006417 P regulation of translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006433 P prolyl-tRNA aminoacylation
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0030529 C ribonucleoprotein complex
GO:0031047 P gene silencing by RNA
5304 O_BomoMG18930_complete:A_BomoMG_comp40548_c0_seq2
532bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0005743 C mitochondrial inner membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0044822 F RNA binding
GO:0070937 C CRD-mediated mRNA stability complex
GO:0070966 P nuclear-transcribed mRNA catabolic process, no-go decay
5305 O_BomoMG18933_complete:A_BomoMG_comp40548_c0_seq3
879bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0005743 C mitochondrial inner membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0044822 F RNA binding
GO:0070937 C CRD-mediated mRNA stability complex
GO:0070966 P nuclear-transcribed mRNA catabolic process, no-go decay
5306 O_BomoMG18938_3prime_partial:A_BomoMG_comp40549_c0_seq1
581bp
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006470 P protein dephosphorylation
GO:0006810 P transport
GO:0010633 P negative regulation of epithelial cell migration
GO:0015031 P protein transport
GO:0016023 C cytoplasmic vesicle
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0019901 F protein kinase binding
GO:0030030 P cell projection organization
GO:0030334 P regulation of cell migration
GO:0031410 C cytoplasmic vesicle
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0036064 C ciliary basal body
GO:0042995 C cell projection
GO:0043162 P ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0060271 P cilium assembly
GO:0070062 C extracellular exosome
GO:1903387 P positive regulation of homophilic cell adhesion
GO:1903393 P positive regulation of adherens junction organization
GO:2000643 P positive regulation of early endosome to late endosome transport
5307 O_BomoMG18939_complete:A_BomoMG_comp40549_c1_seq1
483bp
5308 O_BomoMG18942_complete:A_BomoMG_comp40549_c1_seq2
974bp
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006470 P protein dephosphorylation
GO:0006810 P transport
GO:0010633 P negative regulation of epithelial cell migration
GO:0015031 P protein transport
GO:0016023 C cytoplasmic vesicle
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0019901 F protein kinase binding
GO:0030030 P cell projection organization
GO:0030334 P regulation of cell migration
GO:0031410 C cytoplasmic vesicle
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0036064 C ciliary basal body
GO:0042995 C cell projection
GO:0043162 P ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0060271 P cilium assembly
GO:0070062 C extracellular exosome
GO:1903387 P positive regulation of homophilic cell adhesion
GO:1903393 P positive regulation of adherens junction organization
GO:2000643 P positive regulation of early endosome to late endosome transport
5309 O_BomoMG18945_internal:A_BomoMG_comp40549_c1_seq3
174bp
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006470 P protein dephosphorylation
GO:0006810 P transport
GO:0010633 P negative regulation of epithelial cell migration
GO:0015031 P protein transport
GO:0016023 C cytoplasmic vesicle
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0019901 F protein kinase binding
GO:0030030 P cell projection organization
GO:0030334 P regulation of cell migration
GO:0031410 C cytoplasmic vesicle
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0036064 C ciliary basal body
GO:0042995 C cell projection
GO:0043162 P ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0060271 P cilium assembly
GO:0070062 C extracellular exosome
GO:1903387 P positive regulation of homophilic cell adhesion
GO:1903393 P positive regulation of adherens junction organization
GO:2000643 P positive regulation of early endosome to late endosome transport
5310 O_BomoMG18947_complete:A_BomoMG_comp40550_c0_seq1
316bp
GO:0001651 C dense fibrillar component
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0006396 P RNA processing
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0030529 C ribonucleoprotein complex
GO:0032259 P methylation
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