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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5191 O_BomoMG18739_internal:A_BomoMG_comp40520_c1_seq1
403bp
5192 O_BomoMG1873_complete:A_BomoMG_comp20949_c0_seq1
118bp
 PREDICTED:_uncharacterized_protein_LOC101746538_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022008 P neurogenesis
GO:0042407 P cristae formation
GO:1903850 P regulation of cristae formation
5193 O_BomoMG18740_5prime_partial:A_BomoMG_comp40520_c1_seq2
398bp
5194 O_BomoMG18742_3prime_partial:A_BomoMG_comp40520_c2_seq1
204bp
5195 O_BomoMG18743_5prime_partial:A_BomoMG_comp40521_c0_seq1
908bp
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
5196 O_BomoMG18746_internal:A_BomoMG_comp40521_c0_seq3
318bp
5197 O_BomoMG18748_complete:A_BomoMG_comp40521_c0_seq4
870bp
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
5198 O_BomoMG18750_5prime_partial:A_BomoMG_comp40522_c0_seq1
123bp
GO:0000166 F nucleotide binding
GO:0000775 C chromosome, centromeric region
GO:0000785 C chromatin
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006275 P regulation of DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0008280 C cohesin complex
GO:0030893 C meiotic cohesin complex
GO:0051276 P chromosome organization
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
5199 O_BomoMG18751_5prime_partial:A_BomoMG_comp40522_c0_seq2
120bp
GO:0000166 F nucleotide binding
GO:0000775 C chromosome, centromeric region
GO:0000785 C chromatin
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006275 P regulation of DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0008280 C cohesin complex
GO:0030893 C meiotic cohesin complex
GO:0051276 P chromosome organization
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
5200 O_BomoMG18752_3prime_partial:A_BomoMG_comp40522_c0_seq3
1089bp
GO:0000166 F nucleotide binding
GO:0000775 C chromosome, centromeric region
GO:0000785 C chromatin
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006275 P regulation of DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0008280 C cohesin complex
GO:0030893 C meiotic cohesin complex
GO:0051276 P chromosome organization
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
5201 O_BomoMG18754_5prime_partial:A_BomoMG_comp40524_c0_seq2
314bp
GO:0004563 F beta-N-acetylhexosaminidase activity
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030246 F carbohydrate binding
5202 O_BomoMG18755_5prime_partial:A_BomoMG_comp40524_c0_seq2
144bp
5203 O_BomoMG18756_3prime_partial:A_BomoMG_comp40524_c0_seq3
293bp
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0016430 F tRNA (adenine-N6-)-methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
5204 O_BomoMG18757_3prime_partial:A_BomoMG_comp40524_c0_seq5
258bp
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0016430 F tRNA (adenine-N6-)-methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
5205 O_BomoMG18758_5prime_partial:A_BomoMG_comp40524_c0_seq6
314bp
GO:0004563 F beta-N-acetylhexosaminidase activity
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030246 F carbohydrate binding
5206 O_BomoMG1875_3prime_partial:A_BomoMG_comp20950_c0_seq1
160bp
 PREDICTED:_ribosome_biogenesis_protein_BOP1_homolog_[Bombyx_mori]
GO:0000463 P maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466 P maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0022008 P neurogenesis
GO:0030687 C preribosome, large subunit precursor
GO:0035206 P regulation of hemocyte proliferation
GO:0040018 P positive regulation of multicellular organism growth
GO:0042254 P ribosome biogenesis
GO:0042273 P ribosomal large subunit biogenesis
GO:0043021 F ribonucleoprotein complex binding
GO:0070545 C PeBoW complex
5207 O_BomoMG18760_internal:A_BomoMG_comp40524_c0_seq8
127bp
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0016430 F tRNA (adenine-N6-)-methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
5208 O_BomoMG18761_3prime_partial:A_BomoMG_comp40524_c0_seq9
196bp
GO:0003723 F RNA binding
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0016430 F tRNA (adenine-N6-)-methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
5209 O_BomoMG18762_complete:A_BomoMG_comp40525_c5_seq1
318bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0030529 C ribonucleoprotein complex
5210 O_BomoMG18764_complete:A_BomoMG_comp40525_c5_seq2
318bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0030529 C ribonucleoprotein complex
5211 O_BomoMG18766_complete:A_BomoMG_comp40525_c5_seq3
421bp
5212 O_BomoMG18767_complete:A_BomoMG_comp40525_c5_seq4
538bp
GO:0004029 F aldehyde dehydrogenase (NAD+) activity
GO:0005575 C cellular_component
GO:0006081 P cellular aldehyde metabolic process
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0055114 P obsolete oxidation-reduction process
5213 O_BomoMG18768_5prime_partial:A_BomoMG_comp40525_c5_seq7
196bp
5214 O_BomoMG18769_complete:A_BomoMG_comp40525_c5_seq8
421bp
5215 O_BomoMG1876_3prime_partial:A_BomoMG_comp20950_c0_seq1
160bp
 PREDICTED:_ribosome_biogenesis_protein_BOP1_homolog_[Bombyx_mori]
GO:0000463 P maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466 P maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0022008 P neurogenesis
GO:0030687 C preribosome, large subunit precursor
GO:0035206 P regulation of hemocyte proliferation
GO:0040018 P positive regulation of multicellular organism growth
GO:0042254 P ribosome biogenesis
GO:0042273 P ribosomal large subunit biogenesis
GO:0043021 F ribonucleoprotein complex binding
GO:0070545 C PeBoW complex
5216 O_BomoMG18770_complete:A_BomoMG_comp40525_c5_seq9
421bp
5217 O_BomoMG18771_5prime_partial:A_BomoMG_comp40525_c5_seq10
191bp
5218 O_BomoMG18772_5prime_partial:A_BomoMG_comp40525_c5_seq12
191bp
5219 O_BomoMG18773_complete:A_BomoMG_comp40525_c5_seq14
421bp
5220 O_BomoMG18774_5prime_partial:A_BomoMG_comp40525_c5_seq20
196bp
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