SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/16985
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4861 O_BomoMG18182_complete:A_BomoMG_comp40438_c0_seq2
147bp
4862 O_BomoMG18183_5prime_partial:A_BomoMG_comp40438_c0_seq3
422bp
GO:0002115 P store-operated calcium entry
GO:0005509 F calcium ion binding
GO:0005513 P detection of calcium ion
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0007155 P cell adhesion
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0012505 C endomembrane system
GO:0015279 F store-operated calcium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022416 P chaeta development
GO:0032237 P activation of store-operated calcium channel activity
GO:0046872 F metal ion binding
GO:0048763 F calcium-induced calcium release activity
GO:0051209 P release of sequestered calcium ion into cytosol
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
GO:0051924 P regulation of calcium ion transport
GO:0070588 P calcium ion transmembrane transport
GO:1903779 P regulation of cardiac conduction
4863 O_BomoMG18185_5prime_partial:A_BomoMG_comp40439_c0_seq2
369bp
GO:0003824 F catalytic activity
GO:0004306 F ethanolamine-phosphate cytidylyltransferase activity
GO:0005575 C cellular_component
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006646 P phosphatidylethanolamine biosynthetic process
GO:0008654 P phospholipid biosynthetic process
GO:0009058 P biosynthetic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
4864 O_BomoMG18186_5prime_partial:A_BomoMG_comp40439_c0_seq3
369bp
GO:0003824 F catalytic activity
GO:0004306 F ethanolamine-phosphate cytidylyltransferase activity
GO:0005575 C cellular_component
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006646 P phosphatidylethanolamine biosynthetic process
GO:0008654 P phospholipid biosynthetic process
GO:0009058 P biosynthetic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
4865 O_BomoMG18187_complete:A_BomoMG_comp40440_c1_seq2
327bp
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005783 C endoplasmic reticulum
4866 O_BomoMG18189_complete:A_BomoMG_comp40442_c0_seq1
1175bp
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004823 F leucine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006429 P leucyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
4867 O_BomoMG18190_complete:A_BomoMG_comp40442_c0_seq2
1122bp
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004823 F leucine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006429 P leucyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
4868 O_BomoMG18191_complete:A_BomoMG_comp40442_c0_seq4
469bp
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004823 F leucine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006429 P leucyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
4869 O_BomoMG18192_complete:A_BomoMG_comp40442_c0_seq5
113bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0001934 P positive regulation of protein phosphorylation
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004823 F leucine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006429 P leucyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
4870 O_BomoMG18193_complete:A_BomoMG_comp40443_c1_seq1
864bp
GO:0004571 F mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006486 P protein glycosylation
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
4871 O_BomoMG18196_3prime_partial:A_BomoMG_comp40444_c1_seq1
801bp
GO:0001503 P ossification
GO:0005783 C endoplasmic reticulum
GO:0005791 C rough endoplasmic reticulum
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030867 C rough endoplasmic reticulum membrane
GO:0032967 P positive regulation of collagen biosynthetic process
GO:0045669 P positive regulation of osteoblast differentiation
GO:0046850 P regulation of bone remodeling
4872 O_BomoMG18198_5prime_partial:A_BomoMG_comp40444_c1_seq2
249bp
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0032021 C NELF complex
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051571 P positive regulation of histone H3-K4 methylation
4873 O_BomoMG18199_5prime_partial:A_BomoMG_comp40444_c1_seq3
235bp
4874 O_BomoMG1819_5prime_partial:A_BomoMG_comp20835_c0_seq1
233bp
 PREDICTED:_TFIIH_basal_transcription_factor_complex_helicase_XPD_subunit_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006289 P nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0006979 P response to oxidative stress
GO:0007059 P chromosome segregation
GO:0008022 F protein C-terminus binding
GO:0008026 F helicase activity
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0019907 C cyclin-dependent protein kinase activating kinase holoenzyme complex
GO:0032508 P DNA duplex unwinding
GO:0033683 P nucleotide-excision repair, DNA incision
GO:0035315 P hair cell differentiation
GO:0043139 F 5'-3' DNA helicase activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0071817 C MMXD complex
GO:1901990 P regulation of mitotic cell cycle phase transition
4875 O_BomoMG181_internal:A_BomoMG_comp17408_c0_seq1
174bp
 PREDICTED:_rho_GTPase-activating_protein_7_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005811 C lipid droplet
GO:0007049 P cell cycle
GO:0007165 P signal transduction
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0031966 C mitochondrial membrane
GO:0043542 P endothelial cell migration
GO:0043547 P positive regulation of GTPase activity
GO:0060055 P angiogenesis involved in wound healing
GO:0090051 P negative regulation of cell migration involved in sprouting angiogenesis
GO:0097498 P endothelial tube lumen extension
GO:1903671 P negative regulation of sprouting angiogenesis
4876 O_BomoMG18202_complete:A_BomoMG_comp40444_c1_seq4
119bp
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0032021 C NELF complex
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051571 P positive regulation of histone H3-K4 methylation
4877 O_BomoMG18204_complete:A_BomoMG_comp40444_c1_seq5
119bp
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0032021 C NELF complex
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051571 P positive regulation of histone H3-K4 methylation
4878 O_BomoMG18205_internal:A_BomoMG_comp40444_c1_seq6
121bp
GO:0001503 P ossification
GO:0005783 C endoplasmic reticulum
GO:0005791 C rough endoplasmic reticulum
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030867 C rough endoplasmic reticulum membrane
GO:0032967 P positive regulation of collagen biosynthetic process
GO:0045669 P positive regulation of osteoblast differentiation
GO:0046850 P regulation of bone remodeling
4879 O_BomoMG18206_complete:A_BomoMG_comp40445_c0_seq1
353bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005925 C focal adhesion
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030054 C cell junction
GO:0030332 F cyclin binding
GO:0048471 C perinuclear region of cytoplasm
4880 O_BomoMG18207_3prime_partial:A_BomoMG_comp40445_c0_seq3
359bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005925 C focal adhesion
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030054 C cell junction
GO:0030332 F cyclin binding
GO:0048471 C perinuclear region of cytoplasm
4881 O_BomoMG18208_complete:A_BomoMG_comp40445_c0_seq4
355bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005925 C focal adhesion
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030054 C cell junction
GO:0030332 F cyclin binding
GO:0048471 C perinuclear region of cytoplasm
4882 O_BomoMG18209_complete:A_BomoMG_comp40446_c1_seq1
148bp
4883 O_BomoMG1820_internal:A_BomoMG_comp20836_c0_seq2
188bp
 diphosphomevalonate_decarboxylase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004163 F diphosphomevalonate decarboxylase activity
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0006629 P lipid metabolic process
GO:0006694 P steroid biosynthetic process
GO:0006695 P cholesterol biosynthetic process
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008284 P positive regulation of cell population proliferation
GO:0008299 P isoprenoid biosynthetic process
GO:0016126 P sterol biosynthetic process
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0019287 P isopentenyl diphosphate biosynthetic process, mevalonate pathway
GO:0030544 F Hsp70 protein binding
GO:0042803 F protein homodimerization activity
4884 O_BomoMG18211_complete:A_BomoMG_comp40446_c1_seq2
262bp
4885 O_BomoMG18213_complete:A_BomoMG_comp40446_c1_seq3
543bp
4886 O_BomoMG18215_complete:A_BomoMG_comp40446_c1_seq4
422bp
4887 O_BomoMG18217_complete:A_BomoMG_comp40446_c1_seq5
333bp
4888 O_BomoMG18218_5prime_partial:A_BomoMG_comp40446_c1_seq5
241bp
4889 O_BomoMG18219_complete:A_BomoMG_comp40446_c1_seq6
227bp
4890 O_BomoMG18221_complete:A_BomoMG_comp40446_c1_seq7
622bp
GO:0005515 F protein binding
previous next from show/16985

- SilkBase 1999-2023 -