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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
451 O_BomoMG10705_complete:A_BomoMG_comp38367_c0_seq1
422bp
 PREDICTED:_general_transcription_factor_IIE_subunit_1_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
452 O_BomoMG10707_3prime_partial:A_BomoMG_comp38367_c0_seq1
205bp
 PREDICTED:_rab-like_protein_3_isoform_X1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0007264 P small GTPase mediated signal transduction
GO:0015031 P protein transport
453 O_BomoMG10708_3prime_partial:A_BomoMG_comp38367_c0_seq2
205bp
 PREDICTED:_rab-like_protein_3_isoform_X1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0007264 P small GTPase mediated signal transduction
GO:0015031 P protein transport
454 O_BomoMG10709_complete:A_BomoMG_comp38367_c0_seq3
135bp
 PREDICTED:_rab-like_protein_3_isoform_X1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0007264 P small GTPase mediated signal transduction
GO:0015031 P protein transport
455 O_BomoMG10710_5prime_partial:A_BomoMG_comp38367_c0_seq4
405bp
 PREDICTED:_general_transcription_factor_IIE_subunit_1_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0016032 P viral process
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
456 O_BomoMG10712_complete:A_BomoMG_comp38367_c0_seq6
422bp
 PREDICTED:_general_transcription_factor_IIE_subunit_1_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
457 O_BomoMG10714_complete:A_BomoMG_comp38367_c0_seq7
422bp
 PREDICTED:_general_transcription_factor_IIE_subunit_1_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
458 O_BomoMG10716_complete:A_BomoMG_comp38367_c0_seq7
135bp
 PREDICTED:_rab-like_protein_3_isoform_X1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0007264 P small GTPase mediated signal transduction
GO:0015031 P protein transport
459 O_BomoMG10718_complete:A_BomoMG_comp38369_c0_seq1
159bp
 PREDICTED:_zinc_finger_protein_OZF-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
460 O_BomoMG10719_5prime_partial:A_BomoMG_comp38371_c0_seq1
187bp
 D-arabinose_1-dehydrogenase_[Papilio_xuthus]
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0006012 P galactose metabolic process
GO:0010349 F L-galactose dehydrogenase activity
GO:0016491 F oxidoreductase activity
GO:0019853 P L-ascorbic acid biosynthetic process
GO:0055114 P obsolete oxidation-reduction process
461 O_BomoMG1071_complete:A_BomoMG_comp19783_c0_seq1
163bp
 39S_ribosomal_protein_L41,_mitochondrial_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
462 O_BomoMG10720_internal:A_BomoMG_comp38371_c1_seq1
162bp
 D-arabinose_1-dehydrogenase_[Papilio_xuthus]
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0006012 P galactose metabolic process
GO:0010349 F L-galactose dehydrogenase activity
GO:0016491 F oxidoreductase activity
GO:0019853 P L-ascorbic acid biosynthetic process
GO:0055114 P obsolete oxidation-reduction process
463 O_BomoMG10722_internal:A_BomoMG_comp38373_c0_seq2
182bp
 polymerase_delta_interacting_protein_3_[Bombyx_mori]
464 O_BomoMG10723_5prime_partial:A_BomoMG_comp38373_c0_seq3
177bp
 polymerase_delta_interacting_protein_3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000346 C transcription export complex
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006369 P termination of RNA polymerase II transcription
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006417 P regulation of translation
GO:0006810 P transport
GO:0016607 C nuclear speck
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0031124 P mRNA 3'-end processing
GO:0035145 C exon-exon junction complex
GO:0043231 C intracellular membrane-bounded organelle
GO:0044822 F RNA binding
GO:0045727 P positive regulation of translation
GO:0051028 P mRNA transport
465 O_BomoMG10725_complete:A_BomoMG_comp38375_c0_seq4
191bp
 PREDICTED:_uncharacterized_protein_LOC106720343_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
466 O_BomoMG10726_5prime_partial:A_BomoMG_comp38375_c0_seq4
190bp
 PREDICTED:_uncharacterized_protein_K02A2.6-like_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
467 O_BomoMG10728_complete:A_BomoMG_comp38376_c0_seq1
285bp
 PREDICTED:_forkhead_box_protein_J3-like_[Papilio_xuthus]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0043565 F sequence-specific DNA binding
468 O_BomoMG10729_3prime_partial:A_BomoMG_comp38378_c0_seq2
113bp
 hypothetical_protein_KGM_09534_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0007030 P Golgi organization
GO:0031965 C nuclear membrane
469 O_BomoMG10731_internal:A_BomoMG_comp38381_c0_seq1
105bp
 Yokozuna_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004190 F aspartic-type endopeptidase activity
GO:0005524 F ATP binding
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
470 O_BomoMG10732_5prime_partial:A_BomoMG_comp38381_c1_seq1
352bp
 Yokozuna_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
471 O_BomoMG10734_5prime_partial:A_BomoMG_comp38383_c0_seq2
102bp
 PREDICTED:_putative_inorganic_phosphate_cotransporter_isoform_X2_[Papilio_machaon]
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0006820 P anion transport
GO:0015114 F phosphate ion transmembrane transporter activity
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0035435 P phosphate ion transmembrane transport
GO:0055085 P transmembrane transport
472 O_BomoMG10735_complete:A_BomoMG_comp38383_c0_seq3
392bp
 PREDICTED:_putative_inorganic_phosphate_cotransporter_[Papilio_xuthus]
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0006820 P anion transport
GO:0015114 F phosphate ion transmembrane transporter activity
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0035435 P phosphate ion transmembrane transport
GO:0055085 P transmembrane transport
473 O_BomoMG10736_complete:A_BomoMG_comp38383_c0_seq4
463bp
 PREDICTED:_putative_inorganic_phosphate_cotransporter_[Bombyx_mori]
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0006820 P anion transport
GO:0015114 F phosphate ion transmembrane transporter activity
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0035435 P phosphate ion transmembrane transport
GO:0055085 P transmembrane transport
474 O_BomoMG10737_3prime_partial:A_BomoMG_comp38384_c0_seq1
164bp
 putative_short-chain_dehydrogenase_[Danaus_plexippus]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
475 O_BomoMG1073_internal:A_BomoMG_comp19790_c0_seq1
489bp
 PREDICTED:_facilitated_trehalose_transporter_Tret1-2_homolog_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005351 F carbohydrate:proton symporter activity
GO:0005355 F glucose transmembrane transporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0015574 F trehalose transmembrane transporter activity
GO:0015771 P trehalose transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0035428 P hexose transmembrane transport
GO:0046323 P glucose import
GO:0055085 P transmembrane transport
GO:1904659 P glucose transmembrane transport
476 O_BomoMG10740_3prime_partial:A_BomoMG_comp38384_c0_seq4
164bp
 putative_short-chain_dehydrogenase_[Danaus_plexippus]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
477 O_BomoMG10741_complete:A_BomoMG_comp38384_c0_seq5
311bp
 PREDICTED:_dehydrogenase/reductase_SDR_family_protein_7-like_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
478 O_BomoMG10744_internal:A_BomoMG_comp38385_c0_seq1
141bp
 high_temperature_requirement_protein_A2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0006044 P N-acetylglucosamine metabolic process
GO:0009384 F N-acylmannosamine kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019262 P N-acetylneuraminate catabolic process
GO:0045127 F N-acetylglucosamine kinase activity
GO:0046835 P carbohydrate phosphorylation
GO:0070062 C extracellular exosome
479 O_BomoMG10745_3prime_partial:A_BomoMG_comp38385_c0_seq2
246bp
 PREDICTED:_serine_protease_HTRA2,_mitochondrial-like_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0006044 P N-acetylglucosamine metabolic process
GO:0009384 F N-acylmannosamine kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019262 P N-acetylneuraminate catabolic process
GO:0045127 F N-acetylglucosamine kinase activity
GO:0046835 P carbohydrate phosphorylation
GO:0070062 C extracellular exosome
480 O_BomoMG10746_5prime_partial:A_BomoMG_comp38385_c1_seq2
122bp
 high_temperature_requirement_protein_A2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0006044 P N-acetylglucosamine metabolic process
GO:0006048 P UDP-N-acetylglucosamine biosynthetic process
GO:0006051 P N-acetylmannosamine metabolic process
GO:0009384 F N-acylmannosamine kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019262 P N-acetylneuraminate catabolic process
GO:0045127 F N-acetylglucosamine kinase activity
GO:0046835 P carbohydrate phosphorylation
GO:0070062 C extracellular exosome
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