Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
421	O_BomoMG1064_internal:A_BomoMG_comp19776_c0_seq1 126bp	Bomo_Chr23	PREDICTED:_serine/threonine-protein_phosphatase_6_regulatory_subunit_3-B_[Bombyx_mori]
422	O_BomoMG10651_internal:A_BomoMG_comp38330_c0_seq2 259bp	Bomo_Chr8	PREDICTED:_amyloid_protein-binding_protein_2_[Amyelois_transitella]	GO:0003777 F microtubule motor activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005856 C cytoskeleton GO:0005874 C microtubule GO:0005875 C microtubule associated complex GO:0006810 P transport GO:0006886 P intracellular protein transport GO:0015031 P protein transport GO:0016020 C membrane GO:0030659 C cytoplasmic vesicle membrane GO:0046907 P intracellular transport
423	O_BomoMG10653_internal:A_BomoMG_comp38331_c0_seq1 103bp	Bomo_Chr13	PREDICTED:_probable_glutamine--tRNA_ligase_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003723 F RNA binding GO:0004812 F aminoacyl-tRNA ligase activity GO:0004819 F glutamine-tRNA ligase activity GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0005739 C mitochondrion GO:0005829 C cytosol GO:0005875 C microtubule associated complex GO:0006412 P translation GO:0006418 P tRNA aminoacylation for protein translation GO:0006425 P glutaminyl-tRNA aminoacylation GO:0016874 F ligase activity GO:0016876 F aminoacyl-tRNA ligase activity GO:0017101 C aminoacyl-tRNA synthetase multienzyme complex GO:0043039 P tRNA aminoacylation GO:0048813 P dendrite morphogenesis
424	O_BomoMG10654_3prime_partial:A_BomoMG_comp38331_c0_seq2 261bp	Bomo_Chr13	PREDICTED:_probable_glutamine--tRNA_ligase_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003723 F RNA binding GO:0004812 F aminoacyl-tRNA ligase activity GO:0004819 F glutamine-tRNA ligase activity GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0005739 C mitochondrion GO:0005829 C cytosol GO:0005875 C microtubule associated complex GO:0006412 P translation GO:0006418 P tRNA aminoacylation for protein translation GO:0006425 P glutaminyl-tRNA aminoacylation GO:0016874 F ligase activity GO:0016876 F aminoacyl-tRNA ligase activity GO:0017101 C aminoacyl-tRNA synthetase multienzyme complex GO:0043039 P tRNA aminoacylation GO:0048813 P dendrite morphogenesis
425	O_BomoMG10655_internal:A_BomoMG_comp38331_c0_seq3 199bp	Bomo_Chr13	PREDICTED:_probable_glutamine--tRNA_ligase_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003723 F RNA binding GO:0004812 F aminoacyl-tRNA ligase activity GO:0004819 F glutamine-tRNA ligase activity GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0005739 C mitochondrion GO:0005829 C cytosol GO:0005875 C microtubule associated complex GO:0006412 P translation GO:0006418 P tRNA aminoacylation for protein translation GO:0006425 P glutaminyl-tRNA aminoacylation GO:0016874 F ligase activity GO:0016876 F aminoacyl-tRNA ligase activity GO:0017101 C aminoacyl-tRNA synthetase multienzyme complex GO:0043039 P tRNA aminoacylation GO:0048813 P dendrite morphogenesis
426	O_BomoMG10656_internal:A_BomoMG_comp38332_c0_seq1 104bp	Bomo_Chr11	PREDICTED:_zinc_finger_protein_ZFP69B-like_isoform_X2_[Bombyx_mori]
427	O_BomoMG10657_internal:A_BomoMG_comp38332_c1_seq1 109bp	Bomo_Chr11	PREDICTED:_zinc_finger_protein_ZFP69B-like_isoform_X2_[Bombyx_mori]
428	O_BomoMG10659_5prime_partial:A_BomoMG_comp38333_c0_seq2 214bp	Bomo_Chr5	PREDICTED:_uncharacterized_protein_LOC101736452_isoform_X2_[Bombyx_mori]
429	O_BomoMG10660_5prime_partial:A_BomoMG_comp38333_c0_seq3 247bp	Bomo_Chr5	PREDICTED:_uncharacterized_protein_LOC101736452_isoform_X2_[Bombyx_mori]
430	O_BomoMG10662_internal:A_BomoMG_comp38334_c1_seq1 292bp	Bomo_Chr19	PREDICTED:_zinc_finger_protein_608-like_isoform_X2_[Bombyx_mori]	GO:0046872 F metal ion binding
431	O_BomoMG10664_5prime_partial:A_BomoMG_comp38334_c1_seq2 1011bp	Bomo_Chr19	PREDICTED:_zinc_finger_protein_608-like_isoform_X2_[Bombyx_mori]	GO:0046872 F metal ion binding
432	O_BomoMG10669_5prime_partial:A_BomoMG_comp38334_c1_seq3 314bp	Bomo_Chr19	PREDICTED:_zinc_finger_protein_608-like_isoform_X2_[Bombyx_mori]
433	O_BomoMG1066_internal:A_BomoMG_comp19776_c0_seq2 378bp	Bomo_Chr23	PREDICTED:_serine/threonine-protein_phosphatase_6_regulatory_subunit_3-B_[Bombyx_mori]	GO:0005737 C cytoplasm GO:0019903 F protein phosphatase binding GO:0043231 C intracellular membrane-bounded organelle GO:0043666 P regulation of phosphoprotein phosphatase activity
434	O_BomoMG10671_internal:A_BomoMG_comp38334_c1_seq4 705bp	Bomo_Chr19	PREDICTED:_zinc_finger_protein_608-like_isoform_X2_[Bombyx_mori]	GO:0046872 F metal ion binding
435	O_BomoMG10674_3prime_partial:A_BomoMG_comp38335_c0_seq1 170bp	Bomo_Chr14	PREDICTED:_WD_repeat_domain_phosphoinositide-interacting_protein_4-like_[Amyelois_transitella]	GO:0000045 P autophagosome assembly GO:0000422 P autophagy of mitochondrion GO:0005829 C cytosol GO:0006497 P protein lipidation GO:0006914 P autophagy GO:0019898 C extrinsic component of membrane GO:0032266 F phosphatidylinositol-3-phosphate binding GO:0034045 C phagophore assembly site membrane GO:0034497 P protein localization to phagophore assembly site GO:0044804 P autophagy of nucleus GO:0080025 F phosphatidylinositol-3,5-bisphosphate binding
436	O_BomoMG10677_5prime_partial:A_BomoMG_comp38343_c0_seq1 466bp	Bomo_Chr15	PREDICTED:_bystin_isoform_X1_[Bombyx_mori]	GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0001701 P in utero embryonic development GO:0001825 P blastocyst formation GO:0001829 P trophectodermal cell differentiation GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005730 C nucleolus GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0005881 C cytoplasmic microtubule GO:0006364 P rRNA processing GO:0007155 P cell adhesion GO:0007420 P brain development GO:0007565 P female pregnancy GO:0008283 P cell population proliferation GO:0016020 C membrane GO:0030182 P neuron differentiation GO:0042254 P ribosome biogenesis GO:0042995 C cell projection GO:0043231 C intracellular membrane-bounded organelle GO:0044822 F RNA binding GO:0045177 C apical part of cell GO:0048471 C perinuclear region of cytoplasm GO:0071222 P cellular response to lipopolysaccharide GO:0071347 P cellular response to interleukin-1 GO:0071363 P cellular response to growth factor stimulus GO:0071407 P cellular response to organic cyclic compound
437	O_BomoMG10680_complete:A_BomoMG_comp38348_c0_seq1 512bp	Bomo_Chr9	PREDICTED:_protein_FAM46C_isoform_X1_[Amyelois_transitella]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0008150 P biological_process
438	O_BomoMG10682_complete:A_BomoMG_comp38348_c0_seq3 416bp	Bomo_Chr9	PREDICTED:_protein_FAM46C_isoform_X2_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0008150 P biological_process
439	O_BomoMG10684_3prime_partial:A_BomoMG_comp38349_c0_seq1 131bp	Bomo_Chr12	PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_isoform_X13_[Bombyx_mori]	GO:0005887 C integral component of plasma membrane GO:0007155 P cell adhesion GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0042802 F identical protein binding GO:0048812 P neuron projection morphogenesis
440	O_BomoMG10685_3prime_partial:A_BomoMG_comp38349_c0_seq2 135bp	Bomo_Chr12	PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_isoform_X41_[Bombyx_mori]	GO:0005887 C integral component of plasma membrane GO:0007155 P cell adhesion GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0042802 F identical protein binding GO:0048812 P neuron projection morphogenesis
441	O_BomoMG10686_internal:A_BomoMG_comp38351_c0_seq1 146bp	Bomo_Chr5	PREDICTED:_piggyBac_transposable_element-derived_protein_4-like_isoform_X3_[Bombyx_mori]
442	O_BomoMG10687_internal:A_BomoMG_comp38353_c0_seq3 303bp	Bomo_Chr9	PREDICTED:_uncharacterized_protein_LOC101739231_[Bombyx_mori]
443	O_BomoMG10688_5prime_partial:A_BomoMG_comp38353_c0_seq3 302bp	Bomo_Chr9	putative_serine_palmitoyltransferase_[Trypanosoma_vivax_Y486]
444	O_BomoMG1068_3prime_partial:A_BomoMG_comp19777_c0_seq1 119bp	Bomo_Chr4	Mediator_of_RNA_polymerase_II_transcription_subunit_11_[Operophtera_brumata]	GO:0001104 F transcription coregulator activity GO:0003713 F transcription coactivator activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0006366 P transcription by RNA polymerase II GO:0007406 P negative regulation of neuroblast proliferation GO:0007517 P muscle organ development GO:0016592 C mediator complex GO:0048813 P dendrite morphogenesis
445	O_BomoMG10690_internal:A_BomoMG_comp38353_c0_seq5 298bp	Bomo_Chr9	PREDICTED:_uncharacterized_protein_LOC101739231_[Bombyx_mori]
446	O_BomoMG10693_internal:A_BomoMG_comp38356_c0_seq2 209bp	Bomo_Chr10	PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101739343_[Bombyx_mori]	GO:0005085 F guanyl-nucleotide exchange factor activity GO:0005089 F guanyl-nucleotide exchange factor activity GO:0005737 C cytoplasm GO:0007275 P multicellular organism development GO:0007399 P nervous system development GO:0016020 C membrane GO:0030154 P cell differentiation GO:0030426 C growth cone GO:0035023 P regulation of Rho protein signal transduction GO:0042995 C cell projection GO:0043087 P regulation of GTPase activity GO:0043547 P positive regulation of GTPase activity GO:0048013 P ephrin receptor signaling pathway GO:0061002 P negative regulation of dendritic spine morphogenesis
447	O_BomoMG10695_internal:A_BomoMG_comp38359_c0_seq1 126bp	Bomo_Chr12	hypothetical_protein_KGM_17197_[Danaus_plexippus]
448	O_BomoMG1069_internal:A_BomoMG_comp19779_c0_seq1 183bp	Bomo_Chr11	PREDICTED:_nuclear_pore_complex_protein_Nup160-like_[Amyelois_transitella]	GO:0000724 P double-strand break repair via homologous recombination GO:0005487 F structural constituent of nuclear pore GO:0005515 F protein binding GO:0005634 C nucleus GO:0005643 C nuclear pore GO:0006406 P mRNA export from nucleus GO:0006810 P transport GO:0007184 P regulation of SMAD protein signal transduction GO:0015031 P protein transport GO:0031080 C nuclear pore outer ring GO:0051028 P mRNA transport
449	O_BomoMG10701_internal:A_BomoMG_comp38361_c0_seq1 125bp	Bomo_Chr10	THO_complex_subunit_6-like_protein,_partial_[Papilio_xuthus]	GO:0000347 C THO complex GO:0003674 F molecular_function GO:0006406 P mRNA export from nucleus GO:0008283 P cell population proliferation GO:0009408 P response to heat
450	O_BomoMG10703_5prime_partial:A_BomoMG_comp38366_c0_seq1 345bp	Bomo_Chr23	E3_ubiquitin-protein_ligase_Mdm2-like_[Bombyx_mori]	GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005730 C nucleolus GO:0005737 C cytoplasm GO:0008270 F zinc ion binding GO:0016567 P protein ubiquitination GO:0016874 F ligase activity GO:0043066 P negative regulation of apoptotic process GO:0046872 F metal ion binding GO:0071157 P regulation of cell cycle