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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3451 O_BomoMG15660_3prime_partial:A_BomoMG_comp40016_c0_seq3
374bp
GO:0004842 F ubiquitin-protein transferase activity
GO:0005575 C cellular_component
GO:0016567 P protein ubiquitination
GO:0051438 P regulation of ubiquitin-protein transferase activity
3452 O_BomoMG15662_internal:A_BomoMG_comp40016_c0_seq4
155bp
GO:0004842 F ubiquitin-protein transferase activity
GO:0005575 C cellular_component
GO:0016567 P protein ubiquitination
GO:0051438 P regulation of ubiquitin-protein transferase activity
3453 O_BomoMG15663_complete:A_BomoMG_comp40017_c0_seq1
581bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004824 F lysine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006430 P lysyl-tRNA aminoacylation
GO:0015630 C microtubule cytoskeleton
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
3454 O_BomoMG15664_complete:A_BomoMG_comp40017_c0_seq2
599bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004824 F lysine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006430 P lysyl-tRNA aminoacylation
GO:0015630 C microtubule cytoskeleton
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
3455 O_BomoMG15665_complete:A_BomoMG_comp40018_c0_seq1
227bp
GO:0000166 F nucleotide binding
GO:0000963 P mitochondrial RNA processing
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006119 P oxidative phosphorylation
GO:0016787 F hydrolase activity
GO:0016817 F hydrolase activity, acting on acid anhydrides
GO:0022904 P respiratory electron transport chain
GO:0032508 P DNA duplex unwinding
GO:0044528 P regulation of mitochondrial mRNA stability
GO:0070131 P positive regulation of mitochondrial translation
GO:0090646 P mitochondrial tRNA processing
GO:0097222 P mitochondrial mRNA polyadenylation
3456 O_BomoMG15666_complete:A_BomoMG_comp40018_c0_seq2
773bp
GO:0000166 F nucleotide binding
GO:0000963 P mitochondrial RNA processing
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006119 P oxidative phosphorylation
GO:0016787 F hydrolase activity
GO:0016817 F hydrolase activity, acting on acid anhydrides
GO:0022904 P respiratory electron transport chain
GO:0032508 P DNA duplex unwinding
GO:0044528 P regulation of mitochondrial mRNA stability
GO:0070131 P positive regulation of mitochondrial translation
GO:0090646 P mitochondrial tRNA processing
GO:0097222 P mitochondrial mRNA polyadenylation
3457 O_BomoMG15667_5prime_partial:A_BomoMG_comp40019_c0_seq1
415bp
3458 O_BomoMG15668_complete:A_BomoMG_comp40019_c0_seq1
394bp
GO:0000164 C protein phosphatase type 1 complex
GO:0004860 F protein kinase inhibitor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005802 C trans-Golgi network
GO:0005840 C ribosome
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0006417 P regulation of translation
GO:0006469 P negative regulation of protein kinase activity
GO:0006930 P substrate-dependent cell migration, cell extension
GO:0007015 P actin filament organization
GO:0010976 P positive regulation of neuron projection development
GO:0012506 C vesicle membrane
GO:0016192 P vesicle-mediated transport
GO:0016477 P cell migration
GO:0019904 F protein domain specific binding
GO:0030032 P lamellipodium assembly
GO:0030334 P regulation of cell migration
GO:0030838 P positive regulation of actin filament polymerization
GO:0030971 F receptor tyrosine kinase binding
GO:0033137 P negative regulation of peptidyl-serine phosphorylation
GO:0036493 P positive regulation of translation in response to endoplasmic reticulum stress
GO:0042102 P positive regulation of T cell proliferation
GO:0042110 P T cell activation
GO:0043547 P positive regulation of GTPase activity
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046875 F ephrin receptor binding
GO:0048013 P ephrin receptor signaling pathway
GO:0051707 P response to other organism
GO:0060548 P negative regulation of cell death
GO:0070262 P peptidyl-serine dephosphorylation
GO:0071074 F eukaryotic initiation factor eIF2 binding
GO:1902237 P positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway
GO:1903676 P positive regulation of cap-dependent translational initiation
GO:1903679 P positive regulation of cap-independent translational initiation
GO:1903898 P negative regulation of PERK-mediated unfolded protein response
GO:1903912 P negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation
GO:1904030 P negative regulation of cyclin-dependent protein kinase activity
GO:1990441 P negative regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
3459 O_BomoMG1566_internal:A_BomoMG_comp20451_c0_seq1
119bp
 PREDICTED:_apoptosis-inducing_factor_1,_mitochondrial-like_[Bombyx_mori]
GO:0002931 P response to ischemia
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005758 C mitochondrial intermembrane space
GO:0005829 C cytosol
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0009636 P response to toxic substance
GO:0010942 P positive regulation of cell death
GO:0016020 C membrane
GO:0016174 F NAD(P)H oxidase H2O2-forming activity
GO:0016491 F oxidoreductase activity
GO:0016651 F oxidoreductase activity, acting on NAD(P)H
GO:0030182 P neuron differentiation
GO:0032981 P mitochondrial respiratory chain complex I assembly
GO:0043525 P positive regulation of neuron apoptotic process
GO:0045454 P cell redox homeostasis
GO:0046983 F protein dimerization activity
GO:0048471 C perinuclear region of cytoplasm
GO:0050660 F flavin adenine dinucleotide binding
GO:0051402 P neuron apoptotic process
GO:0055114 P obsolete oxidation-reduction process
GO:0070059 P intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress
GO:0070301 P cellular response to hydrogen peroxide
GO:0071392 P cellular response to estradiol stimulus
GO:0071732 P cellular response to nitric oxide
GO:0071949 F FAD binding
GO:0090650 P cellular response to oxygen-glucose deprivation
GO:1902065 P response to L-glutamate
GO:1902510 P regulation of apoptotic DNA fragmentation
GO:1904045 P cellular response to aldosterone
3460 O_BomoMG15671_complete:A_BomoMG_comp40019_c0_seq2
221bp
GO:0000164 C protein phosphatase type 1 complex
GO:0004860 F protein kinase inhibitor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005802 C trans-Golgi network
GO:0005840 C ribosome
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0006417 P regulation of translation
GO:0006469 P negative regulation of protein kinase activity
GO:0006930 P substrate-dependent cell migration, cell extension
GO:0007015 P actin filament organization
GO:0010976 P positive regulation of neuron projection development
GO:0012506 C vesicle membrane
GO:0016192 P vesicle-mediated transport
GO:0016477 P cell migration
GO:0019904 F protein domain specific binding
GO:0030032 P lamellipodium assembly
GO:0030334 P regulation of cell migration
GO:0030838 P positive regulation of actin filament polymerization
GO:0030971 F receptor tyrosine kinase binding
GO:0033137 P negative regulation of peptidyl-serine phosphorylation
GO:0036493 P positive regulation of translation in response to endoplasmic reticulum stress
GO:0042102 P positive regulation of T cell proliferation
GO:0042110 P T cell activation
GO:0043547 P positive regulation of GTPase activity
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046875 F ephrin receptor binding
GO:0048013 P ephrin receptor signaling pathway
GO:0051707 P response to other organism
GO:0060548 P negative regulation of cell death
GO:0070262 P peptidyl-serine dephosphorylation
GO:0071074 F eukaryotic initiation factor eIF2 binding
GO:1902237 P positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway
GO:1903676 P positive regulation of cap-dependent translational initiation
GO:1903679 P positive regulation of cap-independent translational initiation
GO:1903898 P negative regulation of PERK-mediated unfolded protein response
GO:1903912 P negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation
GO:1904030 P negative regulation of cyclin-dependent protein kinase activity
GO:1990441 P negative regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
3461 O_BomoMG15672_5prime_partial:A_BomoMG_comp40020_c0_seq1
387bp
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
3462 O_BomoMG15673_5prime_partial:A_BomoMG_comp40020_c0_seq3
386bp
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
3463 O_BomoMG15674_internal:A_BomoMG_comp40020_c1_seq1
103bp
3464 O_BomoMG15675_complete:A_BomoMG_comp40021_c0_seq1
328bp
GO:0003824 F catalytic activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0006470 P protein dephosphorylation
GO:0016787 F hydrolase activity
GO:0030517 P negative regulation of axon extension
GO:0031625 F ubiquitin protein ligase binding
GO:0043169 F cation binding
GO:0046872 F metal ion binding
GO:0048786 C presynaptic active zone
GO:0051965 P positive regulation of synapse assembly
3465 O_BomoMG15677_complete:A_BomoMG_comp40021_c0_seq2
323bp
GO:0003824 F catalytic activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0006470 P protein dephosphorylation
GO:0016787 F hydrolase activity
GO:0030517 P negative regulation of axon extension
GO:0031625 F ubiquitin protein ligase binding
GO:0043169 F cation binding
GO:0046872 F metal ion binding
GO:0048786 C presynaptic active zone
GO:0051965 P positive regulation of synapse assembly
3466 O_BomoMG15679_complete:A_BomoMG_comp40022_c1_seq1
785bp
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
3467 O_BomoMG1567_internal:A_BomoMG_comp20451_c0_seq2
156bp
 PREDICTED:_apoptosis-inducing_factor_1,_mitochondrial-like_[Bombyx_mori]
GO:0002931 P response to ischemia
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005758 C mitochondrial intermembrane space
GO:0005829 C cytosol
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0009636 P response to toxic substance
GO:0010942 P positive regulation of cell death
GO:0016020 C membrane
GO:0016174 F NAD(P)H oxidase H2O2-forming activity
GO:0016491 F oxidoreductase activity
GO:0016651 F oxidoreductase activity, acting on NAD(P)H
GO:0030182 P neuron differentiation
GO:0032981 P mitochondrial respiratory chain complex I assembly
GO:0043525 P positive regulation of neuron apoptotic process
GO:0045454 P cell redox homeostasis
GO:0046983 F protein dimerization activity
GO:0048471 C perinuclear region of cytoplasm
GO:0050660 F flavin adenine dinucleotide binding
GO:0051402 P neuron apoptotic process
GO:0055114 P obsolete oxidation-reduction process
GO:0070059 P intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress
GO:0070301 P cellular response to hydrogen peroxide
GO:0071392 P cellular response to estradiol stimulus
GO:0071732 P cellular response to nitric oxide
GO:0071949 F FAD binding
GO:0090650 P cellular response to oxygen-glucose deprivation
GO:1902065 P response to L-glutamate
GO:1902510 P regulation of apoptotic DNA fragmentation
GO:1904045 P cellular response to aldosterone
3468 O_BomoMG15680_3prime_partial:A_BomoMG_comp40022_c1_seq2
609bp
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
3469 O_BomoMG15681_3prime_partial:A_BomoMG_comp40024_c0_seq1
519bp
GO:0004222 F metalloendopeptidase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006508 P proteolysis
GO:0006518 P peptide metabolic process
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0009507 C chloroplast
GO:0016787 F hydrolase activity
GO:0046686 P response to cadmium ion
GO:0046872 F metal ion binding
GO:0048046 C apoplast
3470 O_BomoMG15683_3prime_partial:A_BomoMG_comp40024_c0_seq2
377bp
GO:0004222 F metalloendopeptidase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006508 P proteolysis
GO:0006518 P peptide metabolic process
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0009507 C chloroplast
GO:0016787 F hydrolase activity
GO:0046686 P response to cadmium ion
GO:0046872 F metal ion binding
GO:0048046 C apoplast
3471 O_BomoMG15685_5prime_partial:A_BomoMG_comp40024_c0_seq3
213bp
GO:0004222 F metalloendopeptidase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006508 P proteolysis
GO:0006518 P peptide metabolic process
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0009507 C chloroplast
GO:0009536 C plastid
GO:0009570 C chloroplast stroma
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
3472 O_BomoMG15686_3prime_partial:A_BomoMG_comp40024_c0_seq4
377bp
GO:0004222 F metalloendopeptidase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006508 P proteolysis
GO:0006518 P peptide metabolic process
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0009507 C chloroplast
GO:0016787 F hydrolase activity
GO:0046686 P response to cadmium ion
GO:0046872 F metal ion binding
GO:0048046 C apoplast
3473 O_BomoMG15688_3prime_partial:A_BomoMG_comp40024_c0_seq5
519bp
GO:0004222 F metalloendopeptidase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006508 P proteolysis
GO:0006518 P peptide metabolic process
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0009507 C chloroplast
GO:0016787 F hydrolase activity
GO:0046686 P response to cadmium ion
GO:0046872 F metal ion binding
GO:0048046 C apoplast
3474 O_BomoMG15690_3prime_partial:A_BomoMG_comp40025_c1_seq1
736bp
GO:0004842 F ubiquitin-protein transferase activity
GO:0016567 P protein ubiquitination
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0051438 P regulation of ubiquitin-protein transferase activity
3475 O_BomoMG15693_5prime_partial:A_BomoMG_comp40027_c2_seq1
292bp
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0016226 P iron-sulfur cluster assembly
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
3476 O_BomoMG15695_complete:A_BomoMG_comp40028_c0_seq1
640bp
GO:0000322 C storage vacuole
GO:0001726 C ruffle
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0005938 C cell cortex
GO:0007030 P Golgi organization
GO:0007165 P signal transduction
GO:0007399 P nervous system development
GO:0010763 P positive regulation of fibroblast migration
GO:0019901 F protein kinase binding
GO:0030027 C lamellipodium
GO:0030032 P lamellipodium assembly
GO:0030054 C cell junction
GO:0032092 P positive regulation of protein binding
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043065 P positive regulation of apoptotic process
GO:0043234 C protein-containing complex
GO:0043547 P positive regulation of GTPase activity
GO:0048013 P ephrin receptor signaling pathway
GO:0048041 P focal adhesion assembly
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:0060124 P positive regulation of growth hormone secretion
GO:1900026 P positive regulation of substrate adhesion-dependent cell spreading
GO:1904424 P regulation of GTP binding
GO:2000394 P positive regulation of lamellipodium morphogenesis
3477 O_BomoMG15696_complete:A_BomoMG_comp40029_c0_seq2
383bp
GO:0003677 F DNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
3478 O_BomoMG15698_internal:A_BomoMG_comp40030_c0_seq1
566bp
GO:0005634 C nucleus
GO:0005737 C cytoplasm
3479 O_BomoMG15699_5prime_partial:A_BomoMG_comp40030_c0_seq2
419bp
3480 O_BomoMG1569_complete:A_BomoMG_comp20452_c0_seq1
226bp
 PREDICTED:_ras-related_protein_Rab-31-like_isoform_X1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019003 F GDP binding
GO:0030670 C phagocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031623 P receptor internalization
GO:0032588 C trans-Golgi network membrane
GO:0032869 P cellular response to insulin stimulus
GO:0043001 P Golgi to plasma membrane protein transport
GO:0045055 P regulated exocytosis
GO:0045335 C phagocytic vesicle
GO:0048193 P Golgi vesicle transport
GO:0090382 P phagosome maturation
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