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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3421 O_BomoMG15595_5prime_partial:A_BomoMG_comp40006_c0_seq4
912bp
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0030904 C retromer complex
GO:0042147 P retrograde transport, endosome to Golgi
3422 O_BomoMG15598_internal:A_BomoMG_comp40007_c0_seq1
110bp
GO:0001891 C phagocytic cup
GO:0005886 C plasma membrane
GO:0006909 P phagocytosis
GO:0007155 P cell adhesion
GO:0007517 P muscle organ development
GO:0014719 P skeletal muscle satellite cell activation
GO:0014816 P skeletal muscle satellite cell differentiation
GO:0014841 P skeletal muscle satellite cell proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0034109 P homotypic cell-cell adhesion
GO:0042995 C cell projection
GO:0043654 P recognition of apoptotic cell
GO:0048641 P regulation of skeletal muscle tissue development
GO:0051147 P regulation of muscle cell differentiation
GO:0055001 P muscle cell development
3423 O_BomoMG1559_5prime_partial:A_BomoMG_comp20416_c0_seq1
343bp
 selenophosphate_synthetase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004756 F selenide, water dikinase activity
GO:0005524 F ATP binding
GO:0006541 P glutamine metabolic process
GO:0007005 P mitochondrion organization
GO:0007049 P cell cycle
GO:0007275 P multicellular organism development
GO:0007444 P imaginal disc development
GO:0008283 P cell population proliferation
GO:0008284 P positive regulation of cell population proliferation
GO:0010906 P regulation of glucose metabolic process
GO:0016260 P selenocysteine biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0022008 P neurogenesis
GO:2000378 P negative regulation of reactive oxygen species metabolic process
3424 O_BomoMG155_5prime_partial:A_BomoMG_comp17349_c0_seq1
297bp
 PREDICTED:_S1_RNA-binding_domain-containing_protein_1_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0006139 P nucleobase-containing compound metabolic process
3425 O_BomoMG15600_internal:A_BomoMG_comp40007_c1_seq1
556bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005886 C plasma membrane
GO:0010842 P retina layer formation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0034109 P homotypic cell-cell adhesion
3426 O_BomoMG15601_5prime_partial:A_BomoMG_comp40007_c1_seq1
367bp
3427 O_BomoMG15604_3prime_partial:A_BomoMG_comp40010_c1_seq1
107bp
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0005927 C muscle tendon junction
GO:0007498 P mesoderm development
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
3428 O_BomoMG15605_5prime_partial:A_BomoMG_comp40011_c0_seq1
242bp
GO:0000123 C histone acetyltransferase complex
GO:0000812 C Swr1 complex
GO:0003712 F transcription coregulator activity
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005794 C Golgi apparatus
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0030914 C SAGA complex
GO:0033276 C transcription factor TFTC complex
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
3429 O_BomoMG15606_internal:A_BomoMG_comp40011_c0_seq3
366bp
GO:0000123 C histone acetyltransferase complex
GO:0000812 C Swr1 complex
GO:0003712 F transcription coregulator activity
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005794 C Golgi apparatus
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0030914 C SAGA complex
GO:0033276 C transcription factor TFTC complex
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
3430 O_BomoMG15607_5prime_partial:A_BomoMG_comp40011_c0_seq4
562bp
GO:0000125 C SAGA complex
GO:0000812 C Swr1 complex
GO:0003712 F transcription coregulator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005794 C Golgi apparatus
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0016578 P histone deubiquitination
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0030914 C SAGA complex
GO:0033276 C transcription factor TFTC complex
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:1904837 P beta-catenin-TCF complex assembly
3431 O_BomoMG15608_complete:A_BomoMG_comp40012_c0_seq1
673bp
3432 O_BomoMG1560_complete:A_BomoMG_comp20429_c0_seq1
113bp
 BET1-like_protein_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005801 C cis-Golgi network
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0019905 F syntaxin binding
GO:0031201 C SNARE complex
GO:0031985 C Golgi cisterna
GO:0048280 P vesicle fusion with Golgi apparatus
3433 O_BomoMG15612_complete:A_BomoMG_comp40012_c0_seq2
673bp
3434 O_BomoMG15616_complete:A_BomoMG_comp40012_c0_seq3
793bp
3435 O_BomoMG1561_complete:A_BomoMG_comp20433_c0_seq1
189bp
 transgelin_[Bombyx_mori]
3436 O_BomoMG15620_complete:A_BomoMG_comp40012_c0_seq5
707bp
3437 O_BomoMG15624_complete:A_BomoMG_comp40012_c0_seq6
793bp
3438 O_BomoMG15628_complete:A_BomoMG_comp40012_c0_seq7
707bp
3439 O_BomoMG1562_internal:A_BomoMG_comp20441_c0_seq1
191bp
 hypothetical_protein_KGM_15411_[Danaus_plexippus]
3440 O_BomoMG15632_complete:A_BomoMG_comp40012_c0_seq8
759bp
3441 O_BomoMG15636_complete:A_BomoMG_comp40012_c0_seq9
759bp
3442 O_BomoMG15640_3prime_partial:A_BomoMG_comp40014_c1_seq1
741bp
GO:0003344 P pericardium morphogenesis
GO:0004872 F signaling receptor activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0006930 P substrate-dependent cell migration, cell extension
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007160 P cell-matrix adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0007275 P multicellular organism development
GO:0007298 P border follicle cell migration
GO:0007377 P germ-band extension
GO:0007391 P dorsal closure
GO:0007411 P axon guidance
GO:0007417 P central nervous system development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007427 P epithelial cell migration, open tracheal system
GO:0007431 P salivary gland development
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0007494 P midgut development
GO:0007508 P larval heart development
GO:0007517 P muscle organ development
GO:0007601 P visual perception
GO:0007608 P sensory perception of smell
GO:0007610 P behavior
GO:0007629 P flight behavior
GO:0008305 C integrin complex
GO:0008340 P determination of adult lifespan
GO:0008360 P regulation of cell shape
GO:0009925 C basal plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016203 P muscle attachment
GO:0016324 C apical plasma membrane
GO:0016328 C lateral plasma membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0016340 P calcium-dependent cell-matrix adhesion
GO:0016477 P cell migration
GO:0021551 P central nervous system morphogenesis
GO:0030336 P negative regulation of cell migration
GO:0030718 P germ-line stem cell population maintenance
GO:0031252 C cell leading edge
GO:0031589 P cell-substrate adhesion
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0035001 P dorsal trunk growth, open tracheal system
GO:0035099 P hemocyte migration
GO:0035160 P maintenance of epithelial integrity, open tracheal system
GO:0043034 C costamere
GO:0045214 P sarcomere organization
GO:0046982 F protein heterodimerization activity
GO:0048803 P imaginal disc-derived male genitalia morphogenesis
GO:0050839 F cell adhesion molecule binding
GO:0050896 P response to stimulus
GO:0051492 P regulation of stress fiber assembly
GO:1990430 F extracellular matrix protein binding
3443 O_BomoMG15643_3prime_partial:A_BomoMG_comp40014_c1_seq2
832bp
GO:0003344 P pericardium morphogenesis
GO:0004872 F signaling receptor activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0006930 P substrate-dependent cell migration, cell extension
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007160 P cell-matrix adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0007275 P multicellular organism development
GO:0007298 P border follicle cell migration
GO:0007377 P germ-band extension
GO:0007391 P dorsal closure
GO:0007411 P axon guidance
GO:0007417 P central nervous system development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007427 P epithelial cell migration, open tracheal system
GO:0007431 P salivary gland development
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0007494 P midgut development
GO:0007508 P larval heart development
GO:0007517 P muscle organ development
GO:0007601 P visual perception
GO:0007608 P sensory perception of smell
GO:0007610 P behavior
GO:0007629 P flight behavior
GO:0008305 C integrin complex
GO:0008340 P determination of adult lifespan
GO:0008360 P regulation of cell shape
GO:0009925 C basal plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016203 P muscle attachment
GO:0016324 C apical plasma membrane
GO:0016328 C lateral plasma membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0016340 P calcium-dependent cell-matrix adhesion
GO:0016477 P cell migration
GO:0021551 P central nervous system morphogenesis
GO:0030336 P negative regulation of cell migration
GO:0030718 P germ-line stem cell population maintenance
GO:0031252 C cell leading edge
GO:0031589 P cell-substrate adhesion
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0035001 P dorsal trunk growth, open tracheal system
GO:0035099 P hemocyte migration
GO:0035160 P maintenance of epithelial integrity, open tracheal system
GO:0043034 C costamere
GO:0045214 P sarcomere organization
GO:0046982 F protein heterodimerization activity
GO:0048803 P imaginal disc-derived male genitalia morphogenesis
GO:0050839 F cell adhesion molecule binding
GO:0050896 P response to stimulus
GO:0051492 P regulation of stress fiber assembly
GO:1990430 F extracellular matrix protein binding
3444 O_BomoMG15646_complete:A_BomoMG_comp40015_c0_seq1
388bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
3445 O_BomoMG1564_3prime_partial:A_BomoMG_comp20444_c0_seq1
342bp
 PREDICTED:_fibronectin_type-III_domain-containing_protein_3a_isoform_X2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
3446 O_BomoMG15650_complete:A_BomoMG_comp40015_c0_seq2
305bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
3447 O_BomoMG15653_complete:A_BomoMG_comp40015_c0_seq3
305bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
3448 O_BomoMG15657_internal:A_BomoMG_comp40016_c0_seq1
155bp
GO:0004842 F ubiquitin-protein transferase activity
GO:0005575 C cellular_component
GO:0016567 P protein ubiquitination
GO:0051438 P regulation of ubiquitin-protein transferase activity
3449 O_BomoMG15658_3prime_partial:A_BomoMG_comp40016_c0_seq2
374bp
GO:0004842 F ubiquitin-protein transferase activity
GO:0005575 C cellular_component
GO:0016567 P protein ubiquitination
GO:0051438 P regulation of ubiquitin-protein transferase activity
3450 O_BomoMG1565_complete:A_BomoMG_comp20444_c0_seq1
104bp
 hypothetical_protein_[Acinetobacter_sp._HR7]
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