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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
241 O_BomoMG10383_5prime_partial:A_BomoMG_comp38150_c0_seq1
554bp
 PREDICTED:_4-coumarate--CoA_ligase_1-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0009698 P phenylpropanoid metabolic process
GO:0016207 F 4-coumarate-CoA ligase activity
GO:0016874 F ligase activity
242 O_BomoMG10385_complete:A_BomoMG_comp38154_c0_seq1
1004bp
 PREDICTED:_uncharacterized_protein_C05D11.1-like_[Papilio_xuthus]
GO:0003824 F catalytic activity
GO:0004222 F metalloendopeptidase activity
GO:0008270 F zinc ion binding
GO:0016485 P protein processing
GO:0046872 F metal ion binding
243 O_BomoMG10387_3prime_partial:A_BomoMG_comp38157_c0_seq2
812bp
 PREDICTED:_general_transcription_factor_3C_polypeptide_3_[Papilio_machaon]
GO:0000127 C transcription factor TFIIIC complex
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006383 P transcription by RNA polymerase III
GO:0031965 C nuclear membrane
GO:0042791 P 5S class rRNA transcription by RNA polymerase III
GO:0042797 P tRNA transcription by RNA polymerase III
244 O_BomoMG10388_3prime_partial:A_BomoMG_comp38157_c1_seq1
111bp
 PREDICTED:_DNA_ligase_4-like_[Bombyx_mori]
245 O_BomoMG10389_internal:A_BomoMG_comp38157_c1_seq2
657bp
 PREDICTED:_DNA_ligase_4-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005958 C DNA-dependent protein kinase-DNA ligase 4 complex
GO:0006260 P DNA replication
GO:0006273 P lagging strand elongation
GO:0006281 P DNA repair
GO:0006297 P nucleotide-excision repair, DNA gap filling
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0032807 C DNA ligase IV complex
GO:0033152 P immunoglobulin V(D)J recombination
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0070419 C nonhomologous end joining complex
GO:0071897 P DNA biosynthetic process
246 O_BomoMG10391_internal:A_BomoMG_comp38161_c0_seq2
384bp
 PREDICTED:_E3_ubiquitin-protein_ligase_TRIM33_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
247 O_BomoMG10393_internal:A_BomoMG_comp38161_c0_seq3
329bp
 PREDICTED:_E3_ubiquitin-protein_ligase_TRIM33_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
248 O_BomoMG10395_internal:A_BomoMG_comp38162_c0_seq2
147bp
 PREDICTED:_sprouty-related,_EVH1_domain-containing_protein_1_isoform_X2_[Bombyx_mori]
249 O_BomoMG10396_3prime_partial:A_BomoMG_comp38162_c0_seq3
144bp
 PREDICTED:_sprouty-related,_EVH1_domain-containing_protein_1_isoform_X2_[Bombyx_mori]
250 O_BomoMG10397_5prime_partial:A_BomoMG_comp38162_c0_seq3
105bp
 PREDICTED:_sprouty-related,_EVH1_domain-containing_protein_1_isoform_X2_[Bombyx_mori]
251 O_BomoMG10398_3prime_partial:A_BomoMG_comp38162_c0_seq4
144bp
 PREDICTED:_sprouty-related,_EVH1_domain-containing_protein_1_isoform_X2_[Bombyx_mori]
252 O_BomoMG10399_internal:A_BomoMG_comp38162_c1_seq1
113bp
 PREDICTED:_sprouty-related,_EVH1_domain-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0000188 P obsolete inactivation of MAPK activity
GO:0005173 F stem cell factor receptor binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007275 P multicellular organism development
GO:0009966 P regulation of signal transduction
GO:0010801 P negative regulation of peptidyl-threonine phosphorylation
GO:0016020 C membrane
GO:0019901 F protein kinase binding
GO:0030291 F protein serine/threonine kinase inhibitor activity
GO:0030658 C transport vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0043517 P positive regulation of DNA damage response, signal transduction by p53 class mediator
GO:0090311 P regulation of protein deacetylation
253 O_BomoMG1039_complete:A_BomoMG_comp19753_c0_seq1
292bp
 PREDICTED:_THUMP_domain-containing_protein_1_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
254 O_BomoMG103_internal:A_BomoMG_comp17182_c0_seq1
162bp
 PREDICTED:_oocyte_zinc_finger_protein_XlCOF6-like_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
255 O_BomoMG10400_internal:A_BomoMG_comp38165_c0_seq1
470bp
 PREDICTED:_receptor-mediated_endocytosis_protein_6_homolog_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005829 C cytosol
GO:0006897 P endocytosis
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0032483 P regulation of Rab protein signal transduction
GO:0032794 F GTPase activating protein binding
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0051223 P regulation of protein transport
256 O_BomoMG10404_5prime_partial:A_BomoMG_comp38166_c0_seq1
745bp
 PREDICTED:_procollagen-lysine,2-oxoglutarate_5-dioxygenase_1_isoform_X1_[Bombyx_mori]
GO:0001701 P in utero embryonic development
GO:0001886 P endothelial cell morphogenesis
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0008104 P protein localization
GO:0008475 F procollagen-lysine 5-dioxygenase activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0021915 P neural tube development
GO:0030199 P collagen fibril organization
GO:0030867 C rough endoplasmic reticulum membrane
GO:0031418 F L-ascorbic acid binding
GO:0032870 P cellular response to hormone stimulus
GO:0033823 F procollagen glucosyltransferase activity
GO:0042311 P vasodilation
GO:0046872 F metal ion binding
GO:0048730 P epidermis morphogenesis
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0060425 P lung morphogenesis
GO:0070062 C extracellular exosome
GO:0070831 P basement membrane assembly
257 O_BomoMG10406_5prime_partial:A_BomoMG_comp38168_c0_seq1
289bp
 PREDICTED:_ankyrin_repeat_domain-containing_protein_13C_[Papilio_machaon]
GO:0005102 F signaling receptor binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006621 P protein retention in ER lumen
GO:0010869 P obsolete regulation of receptor biosynthetic process
GO:0016020 C membrane
GO:0048471 C perinuclear region of cytoplasm
GO:2000209 P regulation of anoikis
258 O_BomoMG10407_3prime_partial:A_BomoMG_comp38168_c0_seq2
162bp
 PREDICTED:_ankyrin_repeat_domain-containing_protein_13C-B_[Amyelois_transitella]
GO:0005102 F signaling receptor binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006621 P protein retention in ER lumen
GO:0010869 P obsolete regulation of receptor biosynthetic process
GO:0016020 C membrane
GO:0048471 C perinuclear region of cytoplasm
GO:2000209 P regulation of anoikis
259 O_BomoMG10409_5prime_partial:A_BomoMG_comp38169_c0_seq3
126bp
 PREDICTED:_uncharacterized_protein_LOC106125929,_partial_[Papilio_xuthus]
260 O_BomoMG10410_5prime_partial:A_BomoMG_comp38171_c0_seq3
321bp
 solute_carrier_family_35_member_B3_isoform_1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030173 C integral component of Golgi membrane
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0046963 P 3'-phosphoadenosine 5'-phosphosulfate transport
GO:0046964 F 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:1902559 P 3'-phospho-5'-adenylyl sulfate transmembrane transport
261 O_BomoMG10411_complete:A_BomoMG_comp38173_c0_seq1
223bp
 hypothetical_protein_KGM_08302_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0031489 F myosin V binding
GO:0031982 C vesicle
GO:0043005 C neuron projection
GO:0050808 P synapse organization
262 O_BomoMG10412_complete:A_BomoMG_comp38174_c0_seq1
277bp
 Carbonyl_reductase_[NADPH]_1_[Operophtera_brumata]
GO:0004090 F carbonyl reductase (NADPH) activity
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0017144 P xenobiotic metabolic process
GO:0042373 P vitamin K metabolic process
GO:0047021 F 15-hydroxyprostaglandin dehydrogenase (NADP+) activity
GO:0050221 F prostaglandin-E2 9-reductase activity
GO:0055114 P obsolete oxidation-reduction process
263 O_BomoMG10414_3prime_partial:A_BomoMG_comp38176_c0_seq1
489bp
 PREDICTED:_mucin-6-like_isoform_X1_[Papilio_xuthus]
GO:0003723 F RNA binding
GO:0005634 C nucleus
264 O_BomoMG10415_3prime_partial:A_BomoMG_comp38176_c0_seq2
617bp
 PREDICTED:_mucin-6-like_isoform_X1_[Papilio_machaon]
GO:0003723 F RNA binding
GO:0005634 C nucleus
265 O_BomoMG10416_5prime_partial:A_BomoMG_comp38176_c1_seq1
335bp
 hypothetical_protein_KGM_00476_[Danaus_plexippus]
266 O_BomoMG10419_complete:A_BomoMG_comp38177_c0_seq2
365bp
 PREDICTED:_solute_carrier_family_25_member_36-A_[Amyelois_transitella]
GO:0000002 P mitochondrial genome maintenance
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0006810 P transport
GO:0006864 P pyrimidine nucleotide transport
GO:0007005 P mitochondrion organization
GO:0015218 F pyrimidine nucleotide transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0051881 P regulation of mitochondrial membrane potential
GO:0055085 P transmembrane transport
267 O_BomoMG1041_3prime_partial:A_BomoMG_comp19756_c0_seq1
150bp
 PREDICTED:_exocyst_complex_component_6_[Papilio_polytes]
GO:0000145 C exocyst
GO:0005768 C endosome
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0006904 P vesicle docking involved in exocytosis
GO:0007269 P neurotransmitter secretion
GO:0007298 P border follicle cell migration
GO:0007411 P axon guidance
GO:0015031 P protein transport
GO:0016080 P synaptic vesicle targeting
GO:0016081 P synaptic vesicle docking
GO:0016192 P vesicle-mediated transport
GO:0017137 F small GTPase binding
GO:0022416 P chaeta development
GO:0031410 C cytoplasmic vesicle
GO:0032456 P endocytic recycling
GO:0042331 P phototaxis
GO:0043679 C axon terminus
GO:0055037 C recycling endosome
GO:0072659 P protein localization to plasma membrane
GO:0090522 P vesicle tethering involved in exocytosis
GO:0098793 C presynapse
268 O_BomoMG10420_3prime_partial:A_BomoMG_comp38181_c0_seq1
150bp
 Y+L_amino_acid_transporter_2_[Papilio_xuthus]
GO:0003333 P amino acid transmembrane transport
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015179 F L-amino acid transmembrane transporter activity
GO:0015297 F antiporter activity
GO:0015807 P L-amino acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:1902475 P L-alpha-amino acid transmembrane transport
269 O_BomoMG10423_complete:A_BomoMG_comp38185_c1_seq1
357bp
 PREDICTED:_protein_arginine_N-methyltransferase_1_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0006479 P protein methylation
GO:0008168 F methyltransferase activity
GO:0008469 F histone-arginine N-methyltransferase activity
GO:0008757 F S-adenosylmethionine-dependent methyltransferase activity
GO:0016020 C membrane
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018216 P peptidyl-arginine methylation
GO:0019919 P peptidyl-arginine methylation, to asymmetrical-dimethyl arginine
GO:0032259 P methylation
GO:0034969 P histone arginine methylation
GO:0035241 F protein-arginine omega-N monomethyltransferase activity
GO:0035242 F protein-arginine omega-N asymmetric methyltransferase activity
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0046982 F protein heterodimerization activity
270 O_BomoMG10424_complete:A_BomoMG_comp38187_c0_seq1
263bp
 PREDICTED:_syntaxin-7_[Amyelois_transitella]
GO:0000149 F SNARE binding
GO:0001772 C immunological synapse
GO:0001916 P positive regulation of T cell mediated cytotoxicity
GO:0005484 F SNAP receptor activity
GO:0005515 F protein binding
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005886 C plasma membrane
GO:0006886 P intracellular protein transport
GO:0006906 P vesicle fusion
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0019869 F chloride channel inhibitor activity
GO:0019905 F syntaxin binding
GO:0030139 C endocytic vesicle
GO:0031201 C SNARE complex
GO:0031901 C early endosome membrane
GO:0031982 C vesicle
GO:0042582 C azurophil granule
GO:0043231 C intracellular membrane-bounded organelle
GO:0048278 P vesicle docking
GO:0048471 C perinuclear region of cytoplasm
GO:0051640 P organelle localization
GO:0055037 C recycling endosome
GO:0070062 C extracellular exosome
GO:0070820 C tertiary granule
GO:0070925 P organelle assembly
GO:1902685 P positive regulation of receptor localization to synapse
GO:1903076 P regulation of protein localization to plasma membrane
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