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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
211 O_BomoMG10323_complete:A_BomoMG_comp38133_c1_seq3
124bp
 conserved_hypothetical_protein,_partial_[Papilio_xuthus]
212 O_BomoMG10325_complete:A_BomoMG_comp38135_c0_seq1
352bp
 Uncharacterized_protein_OBRU01_12769_[Operophtera_brumata]
213 O_BomoMG10326_3prime_partial:A_BomoMG_comp38135_c1_seq1
355bp
 Uncharacterized_protein_OBRU01_12769_[Operophtera_brumata]
214 O_BomoMG10328_3prime_partial:A_BomoMG_comp38135_c1_seq2
525bp
 Uncharacterized_protein_OBRU01_12769_[Operophtera_brumata]
215 O_BomoMG10329_5prime_partial:A_BomoMG_comp38136_c0_seq1
305bp
 TPR-repeat_protein_[Bombyx_mori]
216 O_BomoMG1032_complete:A_BomoMG_comp19748_c0_seq1
265bp
 cathepsin_L_[Papilio_xuthus]
GO:0004197 F cysteine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005764 C lysosome
GO:0006508 P proteolysis
GO:0008234 F cysteine-type peptidase activity
GO:0016049 P cell growth
GO:0030435 P sporulation resulting in formation of a cellular spore
GO:0031288 P sorocarp morphogenesis
GO:0031410 C cytoplasmic vesicle
GO:0044351 P macropinocytosis
GO:0051603 P proteolysis involved in cellular protein catabolic process
GO:0072659 P protein localization to plasma membrane
GO:1903665 P negative regulation of asexual reproduction
GO:1903669 P positive regulation of chemorepellent activity
217 O_BomoMG10331_3prime_partial:A_BomoMG_comp38136_c0_seq2
104bp
 TPR-repeat_protein_[Bombyx_mori]
GO:0005515 F protein binding
GO:0097255 C R2TP complex
218 O_BomoMG10332_5prime_partial:A_BomoMG_comp38137_c0_seq1
166bp
 uncharacterized_protein_LOC778500_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
219 O_BomoMG10333_5prime_partial:A_BomoMG_comp38138_c0_seq1
535bp
 ecdysone_oxidase_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0016491 F oxidoreductase activity
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
220 O_BomoMG10334_3prime_partial:A_BomoMG_comp38138_c1_seq1
142bp
 ecdysone_oxidase_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0016491 F oxidoreductase activity
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
221 O_BomoMG10335_3prime_partial:A_BomoMG_comp38138_c2_seq1
561bp
 PREDICTED:_nuclear_protein_localization_protein_4_homolog_[Bombyx_mori]
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008270 F zinc ion binding
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0031625 F ubiquitin protein ligase binding
GO:0043130 F ubiquitin binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0098586 P cellular response to virus
222 O_BomoMG10338_3prime_partial:A_BomoMG_comp38139_c0_seq1
118bp
 Protein_ENL,_partial_[Operophtera_brumata]
223 O_BomoMG10339_3prime_partial:A_BomoMG_comp38139_c1_seq1
215bp
 PREDICTED:_protein_AF-9_[Papilio_machaon]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007379 P segment specification
GO:0008023 C transcription elongation factor complex
GO:0009952 P anterior/posterior pattern specification
GO:0070062 C extracellular exosome
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:2000096 P positive regulation of Wnt signaling pathway, planar cell polarity pathway
224 O_BomoMG10340_3prime_partial:A_BomoMG_comp38139_c3_seq1
250bp
 hypothetical_protein_KGM_00180_[Danaus_plexippus]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007379 P segment specification
GO:0008023 C transcription elongation factor complex
GO:0009952 P anterior/posterior pattern specification
GO:0070062 C extracellular exosome
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:2000096 P positive regulation of Wnt signaling pathway, planar cell polarity pathway
225 O_BomoMG10342_5prime_partial:A_BomoMG_comp38140_c0_seq1
229bp
 PREDICTED:_pantothenate_kinase_3_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0004594 F pantothenate kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0015937 P coenzyme A biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
226 O_BomoMG10344_3prime_partial:A_BomoMG_comp38140_c1_seq1
244bp
 putative_Pantothenate_kinase_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0004594 F pantothenate kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0005829 C cytosol
GO:0007286 P spermatid development
GO:0009060 P aerobic respiration
GO:0009108 P obsolete coenzyme biosynthetic process
GO:0015937 P coenzyme A biosynthetic process
GO:0015939 P pantothenate metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019217 P regulation of fatty acid metabolic process
GO:0051881 P regulation of mitochondrial membrane potential
GO:0070584 P mitochondrion morphogenesis
GO:0090207 P regulation of triglyceride metabolic process
GO:1904251 P regulation of bile acid metabolic process
227 O_BomoMG10345_3prime_partial:A_BomoMG_comp38140_c1_seq2
256bp
 PREDICTED:_pantothenate_kinase_3_isoform_X1_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0004594 F pantothenate kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0005829 C cytosol
GO:0007286 P spermatid development
GO:0009060 P aerobic respiration
GO:0009108 P obsolete coenzyme biosynthetic process
GO:0015937 P coenzyme A biosynthetic process
GO:0015939 P pantothenate metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019217 P regulation of fatty acid metabolic process
GO:0051881 P regulation of mitochondrial membrane potential
GO:0070584 P mitochondrion morphogenesis
GO:0090207 P regulation of triglyceride metabolic process
GO:1904251 P regulation of bile acid metabolic process
228 O_BomoMG10347_internal:A_BomoMG_comp38142_c0_seq2
478bp
 PREDICTED:_uncharacterized_protein_LOC106711079_[Papilio_machaon]
229 O_BomoMG1034_3prime_partial:A_BomoMG_comp19750_c0_seq1
379bp
 hypothetical_protein_KGM_09067_[Danaus_plexippus]
GO:0000123 C histone acetyltransferase complex
GO:0005634 C nucleus
GO:0016568 P chromatin organization
GO:0043981 P histone H4-K5 acetylation
GO:0043982 P histone H4-K8 acetylation
GO:0043984 P histone H4-K16 acetylation
GO:0043995 F histone acetyltransferase activity (H4-K5 specific)
GO:0043996 F histone acetyltransferase activity (H4-K8 specific)
GO:0046972 F histone acetyltransferase activity (H4-K16 specific)
230 O_BomoMG10350_internal:A_BomoMG_comp38142_c0_seq3
447bp
 PREDICTED:_uncharacterized_protein_LOC106711079_[Papilio_machaon]
231 O_BomoMG10354_internal:A_BomoMG_comp38145_c0_seq1
355bp
 PREDICTED:_la-related_protein_1_[Bombyx_mori]
GO:0000001 P mitochondrion inheritance
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0007053 P spindle assembly involved in male meiosis
GO:0007076 P mitotic chromosome condensation
GO:0007140 P male meiotic nuclear division
GO:0035071 P salivary gland cell autophagic cell death
GO:0035186 P syncytial blastoderm mitotic cell cycle
GO:0048102 P autophagic cell death
GO:0051225 P spindle assembly
GO:0051299 P centrosome separation
GO:0051321 P meiotic cell cycle
232 O_BomoMG10357_internal:A_BomoMG_comp38145_c0_seq2
401bp
 PREDICTED:_la-related_protein_1_[Bombyx_mori]
GO:0000001 P mitochondrion inheritance
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0007053 P spindle assembly involved in male meiosis
GO:0007076 P mitotic chromosome condensation
GO:0007140 P male meiotic nuclear division
GO:0035071 P salivary gland cell autophagic cell death
GO:0035186 P syncytial blastoderm mitotic cell cycle
GO:0048102 P autophagic cell death
GO:0051225 P spindle assembly
GO:0051299 P centrosome separation
GO:0051321 P meiotic cell cycle
233 O_BomoMG10363_internal:A_BomoMG_comp38145_c0_seq3
365bp
 PREDICTED:_la-related_protein_1_[Bombyx_mori]
GO:0000001 P mitochondrion inheritance
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0007053 P spindle assembly involved in male meiosis
GO:0007076 P mitotic chromosome condensation
GO:0007140 P male meiotic nuclear division
GO:0035071 P salivary gland cell autophagic cell death
GO:0035186 P syncytial blastoderm mitotic cell cycle
GO:0048102 P autophagic cell death
GO:0051225 P spindle assembly
GO:0051299 P centrosome separation
GO:0051321 P meiotic cell cycle
234 O_BomoMG10367_internal:A_BomoMG_comp38145_c0_seq4
391bp
 PREDICTED:_la-related_protein_1_[Bombyx_mori]
GO:0000001 P mitochondrion inheritance
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0007053 P spindle assembly involved in male meiosis
GO:0007076 P mitotic chromosome condensation
GO:0007140 P male meiotic nuclear division
GO:0035071 P salivary gland cell autophagic cell death
GO:0035186 P syncytial blastoderm mitotic cell cycle
GO:0048102 P autophagic cell death
GO:0051225 P spindle assembly
GO:0051299 P centrosome separation
GO:0051321 P meiotic cell cycle
235 O_BomoMG10372_internal:A_BomoMG_comp38146_c0_seq1
468bp
 PREDICTED:_transducin_beta-like_protein_3_isoform_X1_[Bombyx_mori]
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030515 F snoRNA binding
GO:0032040 C small-subunit processome
GO:0034388 C Pwp2p-containing subcomplex of 90S preribosome
GO:0044822 F RNA binding
236 O_BomoMG10374_3prime_partial:A_BomoMG_comp38147_c0_seq1
418bp
 PREDICTED:_uncharacterized_protein_LOC101736992_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005643 C nuclear pore
GO:0006406 P mRNA export from nucleus
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0030154 P cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048477 P oogenesis
237 O_BomoMG10376_internal:A_BomoMG_comp38147_c0_seq2
129bp
 PREDICTED:_uncharacterized_protein_LOC101736992_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002376 P immune system process
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006810 P transport
GO:0015031 P protein transport
GO:0031965 C nuclear membrane
GO:0051028 P mRNA transport
238 O_BomoMG10377_internal:A_BomoMG_comp38147_c0_seq3
639bp
 PREDICTED:_uncharacterized_protein_LOC101736992_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005643 C nuclear pore
GO:0006406 P mRNA export from nucleus
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0030154 P cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048477 P oogenesis
239 O_BomoMG10379_internal:A_BomoMG_comp38147_c1_seq1
157bp
 PREDICTED:_uncharacterized_protein_LOC101736992_isoform_X1_[Bombyx_mori]
240 O_BomoMG1037_complete:A_BomoMG_comp19752_c0_seq1
300bp
 PREDICTED:_exosome_complex_component_RRP4_[Bombyx_mori]
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000176 C nuclear exosome (RNase complex)
GO:0000177 C cytoplasmic exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0000467 P exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003723 F RNA binding
GO:0004532 F exoribonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006364 P rRNA processing
GO:0008312 F 7S RNA binding
GO:0030307 P positive regulation of cell growth
GO:0034427 P nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
GO:0034475 P U4 snRNA 3'-end processing
GO:0043488 P regulation of mRNA stability
GO:0043928 P exonucleolytic catabolism of deadenylated mRNA
GO:0071034 P CUT catabolic process
GO:0071035 P nuclear polyadenylation-dependent rRNA catabolic process
GO:0071038 P nuclear polyadenylation-dependent tRNA catabolic process
GO:0071049 P nuclear mRNA surveillance
GO:0071051 P polyadenylation-dependent snoRNA 3'-end processing
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