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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1591 O_BomoMG12450_complete:A_BomoMG_comp39136_c0_seq4
493bp
GO:0000979 F RNA polymerase II core promoter sequence-specific DNA binding
GO:0000993 F RNA polymerase II complex binding
GO:0001162 F RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006334 P nucleosome assembly
GO:0006469 P negative regulation of protein kinase activity
GO:0008168 F methyltransferase activity
GO:0014904 P myotube cell development
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0032259 P methylation
GO:0033138 P positive regulation of peptidyl-serine phosphorylation
GO:0034968 P histone lysine methylation
GO:0045184 P establishment of protein localization
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0071549 P cellular response to dexamethasone stimulus
1592 O_BomoMG12451_5prime_partial:A_BomoMG_comp39137_c0_seq1
396bp
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0004726 F non-membrane spanning protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006470 P protein dephosphorylation
GO:0008092 F cytoskeletal protein binding
GO:0009898 C cytoplasmic side of plasma membrane
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
1593 O_BomoMG12452_3prime_partial:A_BomoMG_comp39139_c0_seq1
420bp
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0072572 F poly-ADP-D-ribose binding
1594 O_BomoMG12455_complete:A_BomoMG_comp39141_c0_seq1
340bp
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006464 P cellular protein modification process
GO:0007346 P regulation of mitotic cell cycle
GO:0008022 F protein C-terminus binding
GO:0008641 F ubiquitin-like modifier activating enzyme activity
GO:0016874 F ligase activity
GO:0016925 P protein sumoylation
GO:0019948 F SUMO activating enzyme activity
1595 O_BomoMG12456_complete:A_BomoMG_comp39142_c1_seq1
546bp
1596 O_BomoMG12459_internal:A_BomoMG_comp39143_c0_seq1
544bp
GO:0000166 F nucleotide binding
GO:0000186 P obsolete activation of MAPKK activity
GO:0001525 P angiogenesis
GO:0001666 P response to hypoxia
GO:0002548 P monocyte chemotaxis
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005021 F vascular endothelial growth factor-activated receptor activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0006468 P protein phosphorylation
GO:0006935 P chemotaxis
GO:0006940 P regulation of smooth muscle contraction
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0008284 P positive regulation of cell population proliferation
GO:0010863 P positive regulation of phospholipase C activity
GO:0014068 P positive regulation of phosphatidylinositol 3-kinase signaling
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016477 P cell migration
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0019838 F growth factor binding
GO:0030154 P cell differentiation
GO:0030335 P positive regulation of cell migration
GO:0030522 P intracellular receptor signaling pathway
GO:0030949 P positive regulation of vascular endothelial growth factor receptor signaling pathway
GO:0035924 P cellular response to vascular endothelial growth factor stimulus
GO:0036323 P vascular endothelial growth factor receptor-1 signaling pathway
GO:0036326 F vascular endothelial growth factor-activated receptor activity
GO:0036327 F vascular endothelial growth factor-activated receptor activity
GO:0036332 F placental growth factor-activated receptor activity
GO:0038084 P vascular endothelial growth factor signaling pathway
GO:0043235 C receptor complex
GO:0043406 P positive regulation of MAP kinase activity
GO:0043410 P positive regulation of MAPK cascade
GO:0043552 P positive regulation of phosphatidylinositol 3-kinase activity
GO:0045766 P positive regulation of angiogenesis
GO:0046777 P protein autophosphorylation
GO:0048010 P vascular endothelial growth factor receptor signaling pathway
GO:0048514 P blood vessel morphogenesis
GO:0048598 P embryonic morphogenesis
GO:0048661 P positive regulation of smooth muscle cell proliferation
1597 O_BomoMG1245_complete:A_BomoMG_comp20073_c0_seq1
213bp
 protein_tyrosine_phosphatase_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0006470 P protein dephosphorylation
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
1598 O_BomoMG12460_5prime_partial:A_BomoMG_comp39143_c0_seq2
308bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005007 F fibroblast growth factor-activated receptor activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0008284 P positive regulation of cell population proliferation
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
1599 O_BomoMG12461_5prime_partial:A_BomoMG_comp39143_c0_seq3
304bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005007 F fibroblast growth factor-activated receptor activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0008284 P positive regulation of cell population proliferation
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
1600 O_BomoMG12462_complete:A_BomoMG_comp39145_c0_seq1
169bp
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0044257 P cellular protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:0070062 C extracellular exosome
GO:0070534 P protein K63-linked ubiquitination
GO:0070936 P protein K48-linked ubiquitination
1601 O_BomoMG12464_5prime_partial:A_BomoMG_comp39146_c0_seq1
461bp
GO:0003840 F obsolete gamma-glutamyltransferase activity
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006508 P proteolysis
GO:0006536 P glutamate metabolic process
GO:0006749 P glutathione metabolic process
GO:0006750 P glutathione biosynthetic process
GO:0006751 P glutathione catabolic process
GO:0007568 P aging
GO:0008233 F peptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016787 F hydrolase activity
GO:0031179 P peptide modification
GO:0031638 P zymogen activation
GO:0032355 P response to estradiol
GO:0032496 P response to lipopolysaccharide
GO:0034599 P cellular response to oxidative stress
GO:0034612 P response to tumor necrosis factor
GO:0036374 F glutathione hydrolase activity
1602 O_BomoMG12465_5prime_partial:A_BomoMG_comp39146_c0_seq2
461bp
GO:0003840 F obsolete gamma-glutamyltransferase activity
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006508 P proteolysis
GO:0006536 P glutamate metabolic process
GO:0006749 P glutathione metabolic process
GO:0006750 P glutathione biosynthetic process
GO:0006751 P glutathione catabolic process
GO:0007568 P aging
GO:0008233 F peptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016787 F hydrolase activity
GO:0031179 P peptide modification
GO:0031638 P zymogen activation
GO:0032355 P response to estradiol
GO:0032496 P response to lipopolysaccharide
GO:0034599 P cellular response to oxidative stress
GO:0034612 P response to tumor necrosis factor
GO:0036374 F glutathione hydrolase activity
1603 O_BomoMG12466_5prime_partial:A_BomoMG_comp39146_c0_seq3
468bp
GO:0003840 F obsolete gamma-glutamyltransferase activity
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006508 P proteolysis
GO:0006536 P glutamate metabolic process
GO:0006749 P glutathione metabolic process
GO:0006750 P glutathione biosynthetic process
GO:0006751 P glutathione catabolic process
GO:0007568 P aging
GO:0008233 F peptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016787 F hydrolase activity
GO:0031179 P peptide modification
GO:0031638 P zymogen activation
GO:0032355 P response to estradiol
GO:0032496 P response to lipopolysaccharide
GO:0034599 P cellular response to oxidative stress
GO:0034612 P response to tumor necrosis factor
GO:0036374 F glutathione hydrolase activity
1604 O_BomoMG12467_5prime_partial:A_BomoMG_comp39146_c0_seq4
468bp
GO:0003840 F obsolete gamma-glutamyltransferase activity
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006508 P proteolysis
GO:0006536 P glutamate metabolic process
GO:0006749 P glutathione metabolic process
GO:0006750 P glutathione biosynthetic process
GO:0006751 P glutathione catabolic process
GO:0007568 P aging
GO:0008233 F peptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016787 F hydrolase activity
GO:0031179 P peptide modification
GO:0031638 P zymogen activation
GO:0032355 P response to estradiol
GO:0032496 P response to lipopolysaccharide
GO:0034599 P cellular response to oxidative stress
GO:0034612 P response to tumor necrosis factor
GO:0036374 F glutathione hydrolase activity
1605 O_BomoMG12468_internal:A_BomoMG_comp39147_c0_seq1
151bp
1606 O_BomoMG12469_internal:A_BomoMG_comp39147_c0_seq2
291bp
1607 O_BomoMG1246_3prime_partial:A_BomoMG_comp20074_c0_seq1
660bp
 PREDICTED:_WD_repeat-containing_protein_7_[Bombyx_mori]
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0005737 C cytoplasm
GO:0008021 C synaptic vesicle
1608 O_BomoMG12470_internal:A_BomoMG_comp39147_c0_seq3
291bp
1609 O_BomoMG12471_complete:A_BomoMG_comp39148_c0_seq1
265bp
GO:0005506 F iron ion binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006749 P glutathione metabolic process
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0050313 F sulfur dioxygenase activity
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070813 P hydrogen sulfide metabolic process
1610 O_BomoMG12472_complete:A_BomoMG_comp39149_c0_seq1
298bp
GO:0000226 P microtubule cytoskeleton organization
GO:0001578 P microtubule bundle formation
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005737 C cytoplasm
GO:0005790 C smooth endoplasmic reticulum
GO:0005791 C rough endoplasmic reticulum
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0008017 F microtubule binding
GO:0015631 F tubulin binding
GO:0021954 P central nervous system neuron development
GO:0030425 C dendrite
GO:0031175 P neuron projection development
GO:0032355 P response to estradiol
GO:0032570 P response to progesterone
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043234 C protein-containing complex
1611 O_BomoMG12473_complete:A_BomoMG_comp39149_c0_seq2
302bp
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0008017 F microtubule binding
GO:0015631 F tubulin binding
GO:0016020 C membrane
GO:0030424 C axon
GO:0042995 C cell projection
1612 O_BomoMG12475_5prime_partial:A_BomoMG_comp39154_c2_seq1
163bp
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005921 C gap junction
GO:0007049 P cell cycle
GO:0030054 C cell junction
GO:0051301 P cell division
GO:0060325 P face morphogenesis
1613 O_BomoMG12476_complete:A_BomoMG_comp39155_c0_seq1
679bp
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006897 P endocytosis
GO:0008017 F microtubule binding
GO:0030705 P cytoskeleton-dependent intracellular transport
1614 O_BomoMG12477_complete:A_BomoMG_comp39155_c0_seq2
679bp
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006897 P endocytosis
GO:0008017 F microtubule binding
GO:0030705 P cytoskeleton-dependent intracellular transport
1615 O_BomoMG12478_complete:A_BomoMG_comp39157_c1_seq1
690bp
GO:0002931 P response to ischemia
GO:0005254 F chloride channel activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007605 P sensory perception of sound
GO:0008134 F transcription factor binding
GO:0008271 F secondary active sulfate transmembrane transporter activity
GO:0008272 P sulfate transport
GO:0008360 P regulation of cell shape
GO:0009751 P response to salicylic acid
GO:0010996 P response to auditory stimulus
GO:0015106 F bicarbonate transmembrane transporter activity
GO:0015116 F sulfate transmembrane transporter activity
GO:0015301 F anion:anion antiporter activity
GO:0015701 P bicarbonate transport
GO:0015755 P fructose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0019531 F oxalate transmembrane transporter activity
GO:0019532 P oxalate transport
GO:0030507 F spectrin binding
GO:0034220 P ion transmembrane transport
GO:0034766 P negative regulation of ion transmembrane transport
GO:0035864 P response to potassium ion
GO:0042391 P regulation of membrane potential
GO:0042493 P response to xenobiotic stimulus
GO:0042803 F protein homodimerization activity
GO:0045793 P positive regulation of cell size
GO:0051262 P protein tetramerization
GO:0051453 P regulation of intracellular pH
GO:0055085 P transmembrane transport
GO:0090102 P cochlea development
GO:0097066 P response to thyroid hormone
GO:0098656 P anion transmembrane transport
GO:1902074 P response to salt
GO:1902358 P sulfate transmembrane transport
GO:1902476 P chloride transmembrane transport
GO:2000147 P positive regulation of cell motility
1616 O_BomoMG12482_complete:A_BomoMG_comp39157_c1_seq2
697bp
GO:0002931 P response to ischemia
GO:0005254 F chloride channel activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007605 P sensory perception of sound
GO:0008134 F transcription factor binding
GO:0008271 F secondary active sulfate transmembrane transporter activity
GO:0008272 P sulfate transport
GO:0008360 P regulation of cell shape
GO:0009751 P response to salicylic acid
GO:0010996 P response to auditory stimulus
GO:0015106 F bicarbonate transmembrane transporter activity
GO:0015116 F sulfate transmembrane transporter activity
GO:0015301 F anion:anion antiporter activity
GO:0015701 P bicarbonate transport
GO:0015755 P fructose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0019531 F oxalate transmembrane transporter activity
GO:0019532 P oxalate transport
GO:0030507 F spectrin binding
GO:0034220 P ion transmembrane transport
GO:0034766 P negative regulation of ion transmembrane transport
GO:0035864 P response to potassium ion
GO:0042391 P regulation of membrane potential
GO:0042493 P response to xenobiotic stimulus
GO:0042803 F protein homodimerization activity
GO:0045793 P positive regulation of cell size
GO:0051262 P protein tetramerization
GO:0051453 P regulation of intracellular pH
GO:0055085 P transmembrane transport
GO:0090102 P cochlea development
GO:0097066 P response to thyroid hormone
GO:0098656 P anion transmembrane transport
GO:1902074 P response to salt
GO:1902358 P sulfate transmembrane transport
GO:1902476 P chloride transmembrane transport
GO:2000147 P positive regulation of cell motility
1617 O_BomoMG12485_complete:A_BomoMG_comp39157_c1_seq4
690bp
GO:0002931 P response to ischemia
GO:0005254 F chloride channel activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007605 P sensory perception of sound
GO:0008134 F transcription factor binding
GO:0008271 F secondary active sulfate transmembrane transporter activity
GO:0008272 P sulfate transport
GO:0008360 P regulation of cell shape
GO:0009751 P response to salicylic acid
GO:0010996 P response to auditory stimulus
GO:0015106 F bicarbonate transmembrane transporter activity
GO:0015116 F sulfate transmembrane transporter activity
GO:0015301 F anion:anion antiporter activity
GO:0015701 P bicarbonate transport
GO:0015755 P fructose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0019531 F oxalate transmembrane transporter activity
GO:0019532 P oxalate transport
GO:0030507 F spectrin binding
GO:0034220 P ion transmembrane transport
GO:0034766 P negative regulation of ion transmembrane transport
GO:0035864 P response to potassium ion
GO:0042391 P regulation of membrane potential
GO:0042493 P response to xenobiotic stimulus
GO:0042803 F protein homodimerization activity
GO:0045793 P positive regulation of cell size
GO:0051262 P protein tetramerization
GO:0051453 P regulation of intracellular pH
GO:0055085 P transmembrane transport
GO:0090102 P cochlea development
GO:0097066 P response to thyroid hormone
GO:0098656 P anion transmembrane transport
GO:1902074 P response to salt
GO:1902358 P sulfate transmembrane transport
GO:1902476 P chloride transmembrane transport
GO:2000147 P positive regulation of cell motility
1618 O_BomoMG12488_complete:A_BomoMG_comp39157_c1_seq5
152bp
GO:0000266 P mitochondrial fission
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006915 P apoptotic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
1619 O_BomoMG12490_3prime_partial:A_BomoMG_comp39159_c0_seq1
705bp
GO:0000785 C chromatin
GO:0001955 P blood vessel maturation
GO:0002376 P immune system process
GO:0003676 F nucleic acid binding
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006275 P regulation of DNA replication
GO:0016020 C membrane
GO:0016032 P viral process
GO:0042742 P defense response to bacterium
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0044822 F RNA binding
GO:0045087 P innate immune response
GO:0045787 P positive regulation of cell cycle
GO:0051151 P negative regulation of smooth muscle cell differentiation
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
GO:1900245 P positive regulation of MDA-5 signaling pathway
GO:1900246 P positive regulation of RIG-I signaling pathway
1620 O_BomoMG12495_3prime_partial:A_BomoMG_comp39159_c0_seq2
563bp
GO:0000785 C chromatin
GO:0001955 P blood vessel maturation
GO:0002376 P immune system process
GO:0003676 F nucleic acid binding
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006275 P regulation of DNA replication
GO:0016020 C membrane
GO:0016032 P viral process
GO:0042742 P defense response to bacterium
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0044822 F RNA binding
GO:0045087 P innate immune response
GO:0045787 P positive regulation of cell cycle
GO:0051151 P negative regulation of smooth muscle cell differentiation
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
GO:1900245 P positive regulation of MDA-5 signaling pathway
GO:1900246 P positive regulation of RIG-I signaling pathway
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