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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1561 O_BomoMG12409_5prime_partial:A_BomoMG_comp39118_c0_seq1
352bp
1562 O_BomoMG1240_3prime_partial:A_BomoMG_comp20063_c0_seq3
117bp
 Histone-lysine_N-methyltransferase_setd3_[Papilio_machaon]
1563 O_BomoMG12411_internal:A_BomoMG_comp39118_c3_seq1
367bp
1564 O_BomoMG12413_5prime_partial:A_BomoMG_comp39120_c0_seq1
217bp
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0030163 P protein catabolic process
GO:0030891 C VCB complex
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0031625 F ubiquitin protein ligase binding
GO:0032403 F protein-containing complex binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
1565 O_BomoMG12416_complete:A_BomoMG_comp39122_c0_seq1
352bp
GO:0000278 P mitotic cell cycle
GO:0000790 C chromatin
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0031647 P regulation of protein stability
GO:0036459 F thiol-dependent deubiquitinase
GO:0042393 F histone binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
1566 O_BomoMG12417_5prime_partial:A_BomoMG_comp39122_c0_seq1
149bp
1567 O_BomoMG12418_complete:A_BomoMG_comp39123_c1_seq1
721bp
GO:0000166 F nucleotide binding
GO:0000266 P mitochondrial fission
GO:0001836 P release of cytochrome c from mitochondria
GO:0003374 P dynamin family protein polymerization involved in mitochondrial fission
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005777 C peroxisome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005874 C microtubule
GO:0005903 C brush border
GO:0005905 C clathrin-coated pit
GO:0006897 P endocytosis
GO:0006921 P cellular component disassembly involved in execution phase of apoptosis
GO:0008152 P metabolic process
GO:0008289 F lipid binding
GO:0010821 P regulation of mitochondrion organization
GO:0012501 P programmed cell death
GO:0012505 C endomembrane system
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016559 P peroxisome fission
GO:0016787 F hydrolase activity
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031625 F ubiquitin protein ligase binding
GO:0032459 P regulation of protein oligomerization
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043234 C protein-containing complex
GO:0043653 P mitochondrial fragmentation involved in apoptotic process
GO:0045202 C synapse
GO:0048471 C perinuclear region of cytoplasm
GO:0050714 P positive regulation of protein secretion
GO:0051289 P protein homotetramerization
GO:0060047 P heart contraction
GO:0061025 P membrane fusion
GO:0070266 P necroptotic process
GO:0070584 P mitochondrion morphogenesis
GO:0070585 P protein localization to mitochondrion
GO:0090141 P positive regulation of mitochondrial fission
GO:0090149 P mitochondrial membrane fission
GO:0090200 P positive regulation of release of cytochrome c from mitochondria
GO:1900063 P regulation of peroxisome organization
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903578 P regulation of ATP metabolic process
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
1568 O_BomoMG1241_internal:A_BomoMG_comp20066_c0_seq1
296bp
 PREDICTED:_glycerol-3-phosphate_acyltransferase_1,_mitochondrial_isoform_X3_[Bombyx_mori]
GO:0004366 F glycerol-3-phosphate O-acyltransferase activity
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0005886 C plasma membrane
GO:0006631 P fatty acid metabolic process
GO:0006637 P acyl-CoA metabolic process
GO:0006641 P triglyceride metabolic process
GO:0006650 P glycerophospholipid metabolic process
GO:0008152 P metabolic process
GO:0008374 F O-acyltransferase activity
GO:0008654 P phospholipid biosynthetic process
GO:0009749 P response to glucose
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016024 P CDP-diacylglycerol biosynthetic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019432 P triglyceride biosynthetic process
GO:0040018 P positive regulation of multicellular organism growth
GO:0042104 P positive regulation of activated T cell proliferation
GO:0044255 P cellular lipid metabolic process
GO:0050707 P regulation of cytokine production
GO:0051607 P defense response to virus
GO:0055089 P fatty acid homeostasis
GO:0055091 P phospholipid homeostasis
GO:0070236 P negative regulation of activation-induced cell death of T cells
GO:0070970 P interleukin-2 production
1569 O_BomoMG12420_complete:A_BomoMG_comp39123_c1_seq2
637bp
GO:0000166 F nucleotide binding
GO:0000266 P mitochondrial fission
GO:0001836 P release of cytochrome c from mitochondria
GO:0003374 P dynamin family protein polymerization involved in mitochondrial fission
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005777 C peroxisome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005874 C microtubule
GO:0005903 C brush border
GO:0005905 C clathrin-coated pit
GO:0006897 P endocytosis
GO:0006921 P cellular component disassembly involved in execution phase of apoptosis
GO:0008152 P metabolic process
GO:0008289 F lipid binding
GO:0010821 P regulation of mitochondrion organization
GO:0012501 P programmed cell death
GO:0012505 C endomembrane system
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016559 P peroxisome fission
GO:0016787 F hydrolase activity
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031625 F ubiquitin protein ligase binding
GO:0032459 P regulation of protein oligomerization
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043234 C protein-containing complex
GO:0043653 P mitochondrial fragmentation involved in apoptotic process
GO:0045202 C synapse
GO:0048471 C perinuclear region of cytoplasm
GO:0050714 P positive regulation of protein secretion
GO:0051289 P protein homotetramerization
GO:0060047 P heart contraction
GO:0061025 P membrane fusion
GO:0070266 P necroptotic process
GO:0070584 P mitochondrion morphogenesis
GO:0070585 P protein localization to mitochondrion
GO:0090141 P positive regulation of mitochondrial fission
GO:0090149 P mitochondrial membrane fission
GO:0090200 P positive regulation of release of cytochrome c from mitochondria
GO:1900063 P regulation of peroxisome organization
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903578 P regulation of ATP metabolic process
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
1570 O_BomoMG12422_complete:A_BomoMG_comp39123_c1_seq4
124bp
GO:0000166 F nucleotide binding
GO:0000266 P mitochondrial fission
GO:0001836 P release of cytochrome c from mitochondria
GO:0003374 P dynamin family protein polymerization involved in mitochondrial fission
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005777 C peroxisome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005874 C microtubule
GO:0005903 C brush border
GO:0005905 C clathrin-coated pit
GO:0006897 P endocytosis
GO:0006921 P cellular component disassembly involved in execution phase of apoptosis
GO:0008152 P metabolic process
GO:0008289 F lipid binding
GO:0010821 P regulation of mitochondrion organization
GO:0012501 P programmed cell death
GO:0012505 C endomembrane system
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016559 P peroxisome fission
GO:0016787 F hydrolase activity
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031625 F ubiquitin protein ligase binding
GO:0032459 P regulation of protein oligomerization
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043234 C protein-containing complex
GO:0043653 P mitochondrial fragmentation involved in apoptotic process
GO:0045202 C synapse
GO:0048471 C perinuclear region of cytoplasm
GO:0050714 P positive regulation of protein secretion
GO:0051289 P protein homotetramerization
GO:0060047 P heart contraction
GO:0061025 P membrane fusion
GO:0070266 P necroptotic process
GO:0070584 P mitochondrion morphogenesis
GO:0070585 P protein localization to mitochondrion
GO:0090141 P positive regulation of mitochondrial fission
GO:0090149 P mitochondrial membrane fission
GO:0090200 P positive regulation of release of cytochrome c from mitochondria
GO:1900063 P regulation of peroxisome organization
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903578 P regulation of ATP metabolic process
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
1571 O_BomoMG12423_complete:A_BomoMG_comp39123_c1_seq5
689bp
GO:0000166 F nucleotide binding
GO:0000266 P mitochondrial fission
GO:0001836 P release of cytochrome c from mitochondria
GO:0003374 P dynamin family protein polymerization involved in mitochondrial fission
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005777 C peroxisome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005874 C microtubule
GO:0005903 C brush border
GO:0005905 C clathrin-coated pit
GO:0006897 P endocytosis
GO:0006921 P cellular component disassembly involved in execution phase of apoptosis
GO:0008152 P metabolic process
GO:0008289 F lipid binding
GO:0010821 P regulation of mitochondrion organization
GO:0012501 P programmed cell death
GO:0012505 C endomembrane system
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016559 P peroxisome fission
GO:0016787 F hydrolase activity
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031625 F ubiquitin protein ligase binding
GO:0032459 P regulation of protein oligomerization
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043234 C protein-containing complex
GO:0043653 P mitochondrial fragmentation involved in apoptotic process
GO:0045202 C synapse
GO:0048471 C perinuclear region of cytoplasm
GO:0050714 P positive regulation of protein secretion
GO:0051289 P protein homotetramerization
GO:0060047 P heart contraction
GO:0061025 P membrane fusion
GO:0070266 P necroptotic process
GO:0070584 P mitochondrion morphogenesis
GO:0070585 P protein localization to mitochondrion
GO:0090141 P positive regulation of mitochondrial fission
GO:0090149 P mitochondrial membrane fission
GO:0090200 P positive regulation of release of cytochrome c from mitochondria
GO:1900063 P regulation of peroxisome organization
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903578 P regulation of ATP metabolic process
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
1572 O_BomoMG12426_complete:A_BomoMG_comp39126_c0_seq1
373bp
GO:0005737 C cytoplasm
GO:0019901 F protein kinase binding
1573 O_BomoMG12429_complete:A_BomoMG_comp39126_c0_seq2
240bp
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006457 P protein folding
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0019901 F protein kinase binding
GO:0022008 P neurogenesis
GO:0030296 F protein tyrosine kinase activator activity
GO:0031072 F heat shock protein binding
GO:0035556 P intracellular signal transduction
GO:0046579 P positive regulation of Ras protein signal transduction
GO:0050821 P protein stabilization
GO:0051082 F unfolded protein binding
GO:0051087 F chaperone binding
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
GO:0061098 P positive regulation of protein tyrosine kinase activity
GO:0070374 P positive regulation of ERK1 and ERK2 cascade
1574 O_BomoMG12431_complete:A_BomoMG_comp39127_c0_seq1
133bp
GO:0001054 F RNA polymerase I activity
GO:0001055 F RNA polymerase II activity
GO:0001056 F RNA polymerase III activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005666 C RNA polymerase III complex
GO:0005736 C RNA polymerase I complex
GO:0006351 P transcription, DNA-templated
GO:0006360 P transcription by RNA polymerase I
GO:0006366 P transcription by RNA polymerase II
GO:0006383 P transcription by RNA polymerase III
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
1575 O_BomoMG12432_complete:A_BomoMG_comp39128_c0_seq1
738bp
GO:0003012 P muscle system process
GO:0003674 F molecular_function
GO:0030425 C dendrite
GO:0043025 C neuronal cell body
1576 O_BomoMG12433_5prime_partial:A_BomoMG_comp39128_c0_seq2
685bp
GO:0003012 P muscle system process
GO:0003674 F molecular_function
GO:0030425 C dendrite
GO:0043025 C neuronal cell body
1577 O_BomoMG12434_5prime_partial:A_BomoMG_comp39128_c0_seq3
686bp
GO:0003012 P muscle system process
GO:0003674 F molecular_function
GO:0030425 C dendrite
GO:0043025 C neuronal cell body
1578 O_BomoMG12435_complete:A_BomoMG_comp39128_c0_seq4
641bp
GO:0003012 P muscle system process
GO:0003674 F molecular_function
GO:0030425 C dendrite
GO:0043025 C neuronal cell body
1579 O_BomoMG12436_complete:A_BomoMG_comp39129_c0_seq1
363bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0045089 P positive regulation of innate immune response
GO:0050829 P defense response to Gram-negative bacterium
1580 O_BomoMG12438_complete:A_BomoMG_comp39132_c0_seq2
364bp
1581 O_BomoMG12439_complete:A_BomoMG_comp39132_c0_seq2
304bp
GO:0005634 C nucleus
GO:0005737 C cytoplasm
1582 O_BomoMG1243_internal:A_BomoMG_comp20068_c0_seq1
139bp
 nucleolar_phosphoprotein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0010923 P negative regulation of phosphatase activity
1583 O_BomoMG12440_complete:A_BomoMG_comp39132_c0_seq3
148bp
1584 O_BomoMG12441_5prime_partial:A_BomoMG_comp39132_c0_seq4
112bp
1585 O_BomoMG12443_5prime_partial:A_BomoMG_comp39134_c0_seq2
321bp
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070330 F aromatase activity
1586 O_BomoMG12444_5prime_partial:A_BomoMG_comp39134_c0_seq4
321bp
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070330 F aromatase activity
1587 O_BomoMG12445_5prime_partial:A_BomoMG_comp39135_c0_seq1
440bp
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0009629 P response to gravity
1588 O_BomoMG12447_5prime_partial:A_BomoMG_comp39135_c0_seq2
451bp
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0009629 P response to gravity
1589 O_BomoMG12449_5prime_partial:A_BomoMG_comp39136_c0_seq3
150bp
GO:0000979 F RNA polymerase II core promoter sequence-specific DNA binding
GO:0000993 F RNA polymerase II complex binding
GO:0001162 F RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006334 P nucleosome assembly
GO:0006469 P negative regulation of protein kinase activity
GO:0008168 F methyltransferase activity
GO:0014904 P myotube cell development
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0032259 P methylation
GO:0033138 P positive regulation of peptidyl-serine phosphorylation
GO:0034968 P histone lysine methylation
GO:0045184 P establishment of protein localization
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0071549 P cellular response to dexamethasone stimulus
1590 O_BomoMG1244_5prime_partial:A_BomoMG_comp20068_c1_seq1
101bp
 nucleolar_phosphoprotein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0010923 P negative regulation of phosphatase activity
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