Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
1111	O_BomoMG11707_3prime_partial:A_BomoMG_comp38840_c0_seq4 321bp	Bomo_Chr24	putative_F-box_protein_28_[Danaus_plexippus]	GO:0005515 F protein binding
1112	O_BomoMG11708_3prime_partial:A_BomoMG_comp38846_c0_seq1 544bp	Bomo_Chr18	PREDICTED:_mitogen-activated_protein_kinase_kinase_kinase_11-like_[Papilio_xuthus]	GO:0000166 F nucleotide binding GO:0000186 P obsolete activation of MAPKK activity GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0004706 F JUN kinase kinase kinase activity GO:0004708 F MAP kinase kinase activity GO:0004709 F MAP kinase kinase kinase activity GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005575 C cellular_component GO:0005622 C intracellular anatomical structure GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006468 P protein phosphorylation GO:0006915 P apoptotic process GO:0007256 P obsolete activation of JNKK activity GO:0007257 P obsolete activation of JUN kinase activity GO:0008219 P cell death GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0042803 F protein homodimerization activity GO:0043065 P positive regulation of apoptotic process GO:0046777 P protein autophosphorylation
1113	O_BomoMG1170_complete:A_BomoMG_comp19958_c0_seq1 111bp	Bomo_Chr21	PREDICTED:_protein_NATD1_[Amyelois_transitella]
1114	O_BomoMG11711_5prime_partial:A_BomoMG_comp38848_c0_seq1 178bp	Bomo_Chr10	RNA_binding_motif_protein_18_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0002230 P positive regulation of defense response to virus by host GO:0003674 F molecular_function GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0005575 C cellular_component GO:0098792 P xenophagy
1115	O_BomoMG11712_complete:A_BomoMG_comp38848_c0_seq2 144bp	Bomo_Chr10	RNA_binding_motif_protein_18_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0002230 P positive regulation of defense response to virus by host GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0098792 P xenophagy
1116	O_BomoMG11713_internal:A_BomoMG_comp38849_c0_seq1 587bp	Bomo_Chr26	PREDICTED:_cGMP-specific_3',5'-cyclic_phosphodiesterase-like_[Bombyx_mori]	GO:0004114 F 3',5'-cyclic-nucleotide phosphodiesterase activity GO:0005886 C plasma membrane GO:0007165 P signal transduction GO:0008081 F phosphoric diester hydrolase activity GO:0016020 C membrane GO:0016787 F hydrolase activity GO:0046068 P cGMP metabolic process GO:0046872 F metal ion binding GO:0047555 F 3',5'-cyclic-GMP phosphodiesterase activity
1117	O_BomoMG11717_complete:A_BomoMG_comp38850_c0_seq1 318bp	Bomo_Chr21	PREDICTED:_mitochondrial_ribosomal_protein_L2_isoform_X1_[Bombyx_mori]	GO:0002181 P cytoplasmic translation GO:0003723 F RNA binding GO:0003735 F structural constituent of ribosome GO:0005622 C intracellular anatomical structure GO:0005739 C mitochondrion GO:0005762 C mitochondrial large ribosomal subunit GO:0005840 C ribosome GO:0006412 P translation GO:0015934 C large ribosomal subunit GO:0016740 F transferase activity GO:0030529 C ribonucleoprotein complex GO:0032543 P mitochondrial translation GO:0044822 F RNA binding
1118	O_BomoMG11718_5prime_partial:A_BomoMG_comp38852_c1_seq1 148bp	Bomo_Chr12	prolyl_4-hydroxylase_alpha_subunit_precursor_[Bombyx_mori]	GO:0004656 F procollagen-proline 4-dioxygenase activity GO:0005506 F iron ion binding GO:0005783 C endoplasmic reticulum GO:0005788 C endoplasmic reticulum lumen GO:0016491 F oxidoreductase activity GO:0016702 F oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019511 P peptidyl-proline hydroxylation GO:0031418 F L-ascorbic acid binding GO:0046872 F metal ion binding GO:0051213 F dioxygenase activity GO:0055114 P obsolete oxidation-reduction process
1119	O_BomoMG11719_3prime_partial:A_BomoMG_comp38852_c1_seq2 410bp	Bomo_Chr12	prolyl_4-hydroxylase_alpha_subunit_precursor_[Bombyx_mori]	GO:0004656 F procollagen-proline 4-dioxygenase activity GO:0005506 F iron ion binding GO:0005783 C endoplasmic reticulum GO:0005788 C endoplasmic reticulum lumen GO:0016491 F oxidoreductase activity GO:0016702 F oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019511 P peptidyl-proline hydroxylation GO:0031418 F L-ascorbic acid binding GO:0031545 F peptidyl-proline 4-dioxygenase activity GO:0043412 P macromolecule modification GO:0046872 F metal ion binding GO:0051213 F dioxygenase activity GO:0055114 P obsolete oxidation-reduction process
1120	O_BomoMG1171_complete:A_BomoMG_comp19960_c0_seq1 165bp	Bomo_Chr2	chorion_early_B_[Bombyx_mori]	GO:0005213 F structural constituent of egg chorion GO:0007275 P multicellular organism development GO:0007304 P chorion-containing eggshell formation GO:0042600 C egg chorion
1121	O_BomoMG11723_internal:A_BomoMG_comp38853_c0_seq2 370bp	Bomo_Chr20	PREDICTED:_dystonin-like_[Bombyx_mori]	GO:0003779 F actin binding GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0005856 C cytoskeleton GO:0005886 C plasma membrane GO:0005903 C brush border GO:0005925 C focal adhesion GO:0008092 F cytoskeletal protein binding GO:0008307 F structural constituent of muscle GO:0016528 C sarcoplasm GO:0030054 C cell junction GO:0030056 C hemidesmosome GO:0030506 F ankyrin binding GO:0031581 P hemidesmosome assembly GO:0042383 C sarcolemma GO:0043034 C costamere GO:0043292 C contractile fiber GO:0044822 F RNA binding GO:0045111 C intermediate filament cytoskeleton GO:0070062 C extracellular exosome
1122	O_BomoMG11728_internal:A_BomoMG_comp38853_c1_seq1 108bp	Bomo_Chr20	GH22957_[Drosophila_grimshawi]	GO:0003779 F actin binding GO:0005509 F calcium ion binding GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0005794 C Golgi apparatus GO:0005856 C cytoskeleton GO:0005874 C microtubule GO:0005886 C plasma membrane GO:0007050 P regulation of cell cycle GO:0008017 F microtubule binding GO:0008152 P metabolic process GO:0010632 P regulation of epithelial cell migration GO:0016020 C membrane GO:0016055 P Wnt signaling pathway GO:0016887 F ATP hydrolysis activity GO:0030177 P positive regulation of Wnt signaling pathway GO:0032587 C ruffle membrane GO:0032886 P regulation of microtubule-based process GO:0042060 P wound healing GO:0042995 C cell projection GO:0043001 P Golgi to plasma membrane protein transport GO:0046872 F metal ion binding GO:0051893 P regulation of focal adhesion assembly
1123	O_BomoMG11729_internal:A_BomoMG_comp38853_c1_seq2 131bp	Bomo_Chr20	PREDICTED:_dystonin-like_[Bombyx_mori]	GO:0001725 C stress fiber GO:0003779 F actin binding GO:0005509 F calcium ion binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0005635 C nuclear envelope GO:0005737 C cytoplasm GO:0005783 C endoplasmic reticulum GO:0005789 C endoplasmic reticulum membrane GO:0005856 C cytoskeleton GO:0005874 C microtubule GO:0005882 C intermediate filament GO:0005886 C plasma membrane GO:0005925 C focal adhesion GO:0005938 C cell cortex GO:0007010 P cytoskeleton organization GO:0007050 P regulation of cell cycle GO:0007155 P cell adhesion GO:0007409 P axonogenesis GO:0008090 P retrograde axonal transport GO:0008092 F cytoskeletal protein binding GO:0009898 C cytoplasmic side of plasma membrane GO:0014704 C intercalated disc GO:0015629 C actin cytoskeleton GO:0015630 C microtubule cytoskeleton GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016023 C cytoplasmic vesicle GO:0030018 C Z disc GO:0030054 C cell junction GO:0030056 C hemidesmosome GO:0030424 C axon GO:0031673 C H zone GO:0035371 C microtubule plus-end GO:0042383 C sarcolemma GO:0042803 F protein homodimerization activity GO:0042995 C cell projection GO:0045104 P intermediate filament cytoskeleton organization GO:0046872 F metal ion binding GO:0046907 P intracellular transport GO:0048471 C perinuclear region of cytoplasm GO:0051010 F microtubule plus-end binding GO:0097038 C perinuclear endoplasmic reticulum GO:0097481 C postsynaptic density GO:1904115 C axon cytoplasm
1124	O_BomoMG1172_5prime_partial:A_BomoMG_comp19966_c0_seq1 252bp	Bomo_Chr25	PREDICTED:_ribosomal_RNA_processing_protein_36_homolog_[Amyelois_transitella]	GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0000469 P cleavage involved in rRNA processing GO:0005634 C nucleus GO:0005730 C nucleolus GO:0006364 P rRNA processing GO:0030686 C 90S preribosome GO:0042254 P ribosome biogenesis
1125	O_BomoMG11730_complete:A_BomoMG_comp38854_c0_seq2 2434bp	Bomo_Chr4	PREDICTED:_piezo-type_mechanosensitive_ion_channel_component_isoform_X5_[Bombyx_mori]	GO:0005886 C plasma membrane GO:0006810 P transport GO:0006811 P ion transport GO:0007638 P mechanosensory behavior GO:0008381 F mechanosensitive ion channel activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0034220 P ion transmembrane transport GO:0050896 P response to stimulus GO:0071260 P cellular response to mechanical stimulus
1126	O_BomoMG11733_complete:A_BomoMG_comp38854_c0_seq3 2431bp	Bomo_Chr4	PREDICTED:_piezo-type_mechanosensitive_ion_channel_component_isoform_X5_[Bombyx_mori]	GO:0005886 C plasma membrane GO:0006810 P transport GO:0006811 P ion transport GO:0007638 P mechanosensory behavior GO:0008381 F mechanosensitive ion channel activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0034220 P ion transmembrane transport GO:0050896 P response to stimulus GO:0071260 P cellular response to mechanical stimulus
1127	O_BomoMG11736_complete:A_BomoMG_comp38854_c0_seq4 1406bp	Bomo_Chr4	PREDICTED:_piezo-type_mechanosensitive_ion_channel_component_isoform_X3_[Bombyx_mori]	GO:0005886 C plasma membrane GO:0006810 P transport GO:0006811 P ion transport GO:0007638 P mechanosensory behavior GO:0008381 F mechanosensitive ion channel activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0034220 P ion transmembrane transport GO:0050896 P response to stimulus GO:0071260 P cellular response to mechanical stimulus
1128	O_BomoMG11739_complete:A_BomoMG_comp38854_c0_seq5 1033bp	Bomo_Chr4	PREDICTED:_piezo-type_mechanosensitive_ion_channel_component_isoform_X5_[Bombyx_mori]	GO:0005886 C plasma membrane GO:0006810 P transport GO:0006811 P ion transport GO:0007638 P mechanosensory behavior GO:0008381 F mechanosensitive ion channel activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0034220 P ion transmembrane transport GO:0050896 P response to stimulus GO:0071260 P cellular response to mechanical stimulus
1129	O_BomoMG11740_complete:A_BomoMG_comp38855_c0_seq2 263bp	Bomo_Chr11	PREDICTED:_ubiquitin_domain-containing_protein_UBFD1-like_[Bombyx_mori]	GO:0044822 F RNA binding
1130	O_BomoMG11741_complete:A_BomoMG_comp38855_c0_seq3 290bp	Bomo_Chr11	PREDICTED:_ubiquitin_domain-containing_protein_UBFD1-like_[Bombyx_mori]	GO:0044822 F RNA binding
1131	O_BomoMG11742_complete:A_BomoMG_comp38856_c1_seq1 432bp	Bomo_Chr1	PREDICTED:_prostatic_acid_phosphatase-like_[Bombyx_mori]	GO:0003993 F acid phosphatase activity GO:0005764 C lysosome GO:0005765 C lysosomal membrane GO:0008152 P metabolic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016311 P dephosphorylation GO:0016787 F hydrolase activity GO:0043202 C lysosomal lumen
1132	O_BomoMG11743_5prime_partial:A_BomoMG_comp38859_c0_seq1 367bp	Bomo_Chr17	PREDICTED:_2-methylene-furan-3-one_reductase-like_[Bombyx_mori]	GO:0008270 F zinc ion binding GO:0016491 F oxidoreductase activity GO:0046872 F metal ion binding GO:0055114 P obsolete oxidation-reduction process
1133	O_BomoMG11744_complete:A_BomoMG_comp38859_c0_seq1 327bp	Bomo_Chr17	nuclear_distribution_protein_NUDC_[Biston_betularia]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0008150 P biological_process
1134	O_BomoMG11745_complete:A_BomoMG_comp38859_c0_seq2 305bp	Bomo_Chr17	nuclear_distribution_protein_NUDC_[Biston_betularia]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0008150 P biological_process
1135	O_BomoMG11746_5prime_partial:A_BomoMG_comp38859_c0_seq3 367bp	Bomo_Chr17	PREDICTED:_2-methylene-furan-3-one_reductase-like_[Bombyx_mori]	GO:0008270 F zinc ion binding GO:0016491 F oxidoreductase activity GO:0046872 F metal ion binding GO:0055114 P obsolete oxidation-reduction process
1136	O_BomoMG11747_5prime_partial:A_BomoMG_comp38859_c0_seq4 367bp	Bomo_Chr17	PREDICTED:_2-methylene-furan-3-one_reductase-like_[Bombyx_mori]	GO:0008270 F zinc ion binding GO:0016491 F oxidoreductase activity GO:0046872 F metal ion binding GO:0055114 P obsolete oxidation-reduction process
1137	O_BomoMG11748_3prime_partial:A_BomoMG_comp38860_c0_seq1 643bp	Bomo_Chr14	PREDICTED:_uncharacterized_protein_LOC101737617_isoform_X3_[Bombyx_mori]
1138	O_BomoMG11749_5prime_partial:A_BomoMG_comp38860_c0_seq1 287bp	Bomo_Chr14	PREDICTED:_uncharacterized_protein_LOC101737617_isoform_X4_[Bombyx_mori]
1139	O_BomoMG1174_3prime_partial:A_BomoMG_comp19967_c0_seq2 228bp	Bomo_Chr18	PREDICTED:_protein_RMD5_homolog_B_[Bombyx_mori]
1140	O_BomoMG11752_3prime_partial:A_BomoMG_comp38860_c0_seq2 607bp	Bomo_Chr14	PREDICTED:_uncharacterized_protein_LOC101737617_isoform_X4_[Bombyx_mori]