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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10141 O_BomoMG27607_complete:A_BomoMG_comp65413_c0_seq1
160bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation
GO:0008033 P tRNA processing
GO:0022008 P neurogenesis
GO:0046872 F metal ion binding
GO:0048680 P positive regulation of axon regeneration
GO:0072669 C tRNA-splicing ligase complex
10142 O_BomoMG27608_5prime_partial:A_BomoMG_comp65424_c0_seq1
163bp
GO:0000228 C nuclear chromosome
GO:0000775 C chromosome, centromeric region
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0051301 P cell division
GO:0071168 P protein localization to chromatin
10143 O_BomoMG27609_complete:A_BomoMG_comp65436_c0_seq1
256bp
GO:0004303 F estradiol 17-beta-dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0006694 P steroid biosynthetic process
GO:0006703 P estrogen biosynthetic process
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0047035 F testosterone dehydrogenase (NAD+) activity
GO:0055114 P obsolete oxidation-reduction process
10144 O_BomoMG2760_internal:A_BomoMG_comp22318_c1_seq1
197bp
 PREDICTED:_protein_sprint_[Amyelois_transitella]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005938 C cell cortex
GO:0006897 P endocytosis
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007298 P border follicle cell migration
GO:0017016 F small GTPase binding
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0019901 F protein kinase binding
GO:0030139 C endocytic vesicle
GO:0030971 F receptor tyrosine kinase binding
GO:0032483 P regulation of Rab protein signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0048675 P axon extension
10145 O_BomoMG27611_complete:A_BomoMG_comp66111_c0_seq1
249bp
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000778 C kinetochore
GO:0000941 C inner kinetochore
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005816 C spindle pole body
GO:0005856 C cytoskeleton
GO:0007020 P microtubule nucleation
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0008017 F microtubule binding
GO:0016020 C membrane
GO:0031134 P sister chromatid biorientation
GO:0031617 C NMS complex
GO:0031965 C nuclear membrane
GO:0034501 P protein localization to kinetochore
GO:0051010 F microtubule plus-end binding
GO:1990758 P mitotic sister chromatid biorientation
10146 O_BomoMG27613_5prime_partial:A_BomoMG_comp66573_c0_seq1
470bp
GO:0002376 P immune system process
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005576 C extracellular region
GO:0005975 P carbohydrate metabolic process
GO:0030246 F carbohydrate binding
GO:0042742 P defense response to bacterium
GO:0045087 P innate immune response
GO:0045088 P regulation of innate immune response
10147 O_BomoMG27614_complete:A_BomoMG_comp66801_c0_seq1
120bp
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001889 P liver development
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006955 P immune response
GO:0008134 F transcription factor binding
GO:0016071 P mRNA metabolic process
GO:0030183 P B cell differentiation
GO:0042267 P natural killer cell mediated cytotoxicity
GO:0042803 F protein homodimerization activity
GO:0043353 P enucleate erythrocyte differentiation
GO:0043388 P positive regulation of DNA binding
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0043565 F sequence-specific DNA binding
GO:0044377 F RNA polymerase II cis-regulatory region sequence-specific DNA binding, bending
GO:0045078 P positive regulation of interferon-gamma production
GO:0045739 P positive regulation of DNA repair
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0051091 P positive regulation of DNA-binding transcription factor activity
10148 O_BomoMG27616_internal:A_BomoMG_comp66923_c0_seq1
672bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0023014 P signal transduction
GO:0030334 P regulation of cell migration
GO:0031122 P cytoplasmic microtubule organization
GO:0031252 C cell leading edge
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0042981 P regulation of apoptotic process
GO:0046777 P protein autophosphorylation
GO:0051893 P regulation of focal adhesion assembly
GO:0070062 C extracellular exosome
10149 O_BomoMG27619_complete:A_BomoMG_comp67044_c0_seq1
410bp
GO:0000060 P obsolete protein import into nucleus, translocation
GO:0000166 F nucleotide binding
GO:0000387 P spliceosomal snRNP assembly
GO:0000974 C Prp19 complex
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005487 F structural constituent of nuclear pore
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0017070 F U6 snRNA binding
GO:0033120 P positive regulation of RNA splicing
GO:0035690 P cellular response to xenobiotic stimulus
GO:0036002 F pre-mRNA binding
GO:0044822 F RNA binding
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0046872 F metal ion binding
GO:0048306 F calcium-dependent protein binding
GO:0071006 C U2-type catalytic step 1 spliceosome
GO:0071007 C U2-type catalytic step 2 spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:0090316 P positive regulation of intracellular protein transport
10150 O_BomoMG2761_internal:A_BomoMG_comp22321_c0_seq1
542bp
 PREDICTED:_CUB_and_sushi_domain-containing_protein_3_isoform_X2_[Bombyx_mori]
GO:0003682 F chromatin binding
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0007155 P cell adhesion
GO:0008150 P biological_process
GO:0016020 C membrane
10151 O_BomoMG27621_complete:A_BomoMG_comp67414_c0_seq1
278bp
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0030574 P collagen catabolic process
10152 O_BomoMG27624_5prime_partial:A_BomoMG_comp68853_c0_seq1
209bp
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
10153 O_BomoMG27626_internal:A_BomoMG_comp69181_c0_seq1
152bp
10154 O_BomoMG27627_complete:A_BomoMG_comp69254_c0_seq1
439bp
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0007033 P vacuole organization
GO:0007049 P cell cycle
GO:0008152 P metabolic process
GO:0008568 F microtubule-severing ATPase activity
GO:0009838 P abscission
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016197 P endosomal transport
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0017048 F small GTPase binding
GO:0030496 C midbody
GO:0031122 P cytoplasmic microtubule organization
GO:0031902 C late endosome membrane
GO:0032466 P negative regulation of cytokinesis
GO:0051301 P cell division
GO:1903774 P positive regulation of viral budding via host ESCRT complex
10155 O_BomoMG27630_3prime_partial:A_BomoMG_comp69656_c0_seq1
299bp
GO:0005739 C mitochondrion
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
10156 O_BomoMG27632_5prime_partial:A_BomoMG_comp69658_c0_seq1
237bp
GO:0005634 C nucleus
GO:0006950 P response to stress
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0051726 P regulation of cell cycle
10157 O_BomoMG27633_complete:A_BomoMG_comp69742_c0_seq1
423bp
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016192 P vesicle-mediated transport
GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030131 C clathrin adaptor complex
GO:0030659 C cytoplasmic vesicle membrane
GO:0030665 C clathrin-coated vesicle membrane
GO:0030669 C clathrin-coated endocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032438 P melanosome organization
GO:0032588 C trans-Golgi network membrane
GO:0035646 P endosome to melanosome transport
GO:0050690 P regulation of defense response to virus by virus
GO:0070062 C extracellular exosome
10158 O_BomoMG27634_complete:A_BomoMG_comp69975_c0_seq1
152bp
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0000422 P autophagy of mitochondrion
GO:0000790 C chromatin
GO:0002039 F p53 binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007052 P mitotic spindle organization
GO:0016567 P protein ubiquitination
GO:0016574 P histone ubiquitination
GO:0016740 F transferase activity
GO:0019904 F protein domain specific binding
GO:0031625 F ubiquitin protein ligase binding
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032456 P endocytic recycling
GO:0033503 C HULC complex
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043066 P negative regulation of apoptotic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043518 P negative regulation of DNA damage response, signal transduction by p53 class mediator
GO:0051297 P centrosome cycle
GO:0051299 P centrosome separation
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:1902166 P negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
10159 O_BomoMG27635_5prime_partial:A_BomoMG_comp70303_c0_seq1
121bp
10160 O_BomoMG27636_complete:A_BomoMG_comp70895_c0_seq1
440bp
GO:0003674 F molecular_function
GO:0005576 C extracellular region
GO:0008150 P biological_process
GO:0070062 C extracellular exosome
GO:0072562 C blood microparticle
10161 O_BomoMG27638_complete:A_BomoMG_comp71020_c0_seq1
135bp
10162 O_BomoMG27640_internal:A_BomoMG_comp71144_c0_seq1
156bp
10163 O_BomoMG27642_internal:A_BomoMG_comp71260_c0_seq1
104bp
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0048812 P neuron projection morphogenesis
10164 O_BomoMG27644_3prime_partial:A_BomoMG_comp71307_c0_seq1
395bp
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0090002 P protein localization to plasma membrane
10165 O_BomoMG27646_internal:A_BomoMG_comp71644_c0_seq1
106bp
10166 O_BomoMG27647_complete:A_BomoMG_comp71655_c0_seq1
455bp
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005794 C Golgi apparatus
GO:0006996 P organelle organization
GO:0016020 C membrane
10167 O_BomoMG27648_internal:A_BomoMG_comp71857_c0_seq1
217bp
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0007399 P nervous system development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019887 F protein kinase regulator activity
GO:0030165 F PDZ domain binding
GO:0038180 P nerve growth factor signaling pathway
GO:0045859 P regulation of protein kinase activity
10168 O_BomoMG2764_5prime_partial:A_BomoMG_comp22321_c1_seq1
257bp
 PREDICTED:_CUB_and_sushi_domain-containing_protein_3_isoform_X2_[Bombyx_mori]
10169 O_BomoMG27650_complete:A_BomoMG_comp71937_c0_seq1
128bp
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0002168 P instar larval development
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005744 C TIM23 mitochondrial import inner membrane translocase complex
GO:0006810 P transport
GO:0007275 P multicellular organism development
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0022008 P neurogenesis
GO:0030150 P protein import into mitochondrial matrix
10170 O_BomoMG27651_complete:A_BomoMG_comp73086_c0_seq1
120bp
GO:0000387 P spliceosomal snRNP assembly
GO:0000395 P mRNA 5'-splice site recognition
GO:0000974 C Prp19 complex
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005682 C U5 snRNP
GO:0005685 C U1 snRNP
GO:0005686 C U2 snRNP
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0071004 C U2-type prespliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
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