Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
841	O_BomoFB10758_3prime_partial:A_BomoFB_comp9860_c0_seq2 104bp	Bomo_Chr25
842	O_BomoFB10759_3prime_partial:A_BomoFB_comp9861_c0_seq1 2179bp	Bomo_Chr27	PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101738244_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0005912 C adherens junction GO:0005923 C bicellular tight junction GO:0006468 P protein phosphorylation GO:0010765 P positive regulation of sodium ion transport GO:0010800 P positive regulation of peptidyl-threonine phosphorylation GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0019869 F chloride channel inhibitor activity GO:0032414 P positive regulation of ion transmembrane transporter activity GO:0035556 P intracellular signal transduction GO:0043066 P negative regulation of apoptotic process GO:0046777 P protein autophosphorylation GO:0051928 P positive regulation of calcium ion transport GO:0090004 P positive regulation of protein localization to plasma membrane GO:0090188 P negative regulation of pancreatic juice secretion GO:2000021 P ion homeostasis GO:2000651 P positive regulation of sodium ion transmembrane transporter activity GO:2000682 P obsolete positive regulation of rubidium ion transport GO:2000688 P obsolete positive regulation of rubidium ion transmembrane transporter activity
843	O_BomoFB1075_complete:A_BomoFB_comp2867_c0_seq1 140bp	Bomo_Chr20	Uncharacterised_protein_[Bordetella_pertussis]
844	O_BomoFB10760_complete:A_BomoFB_comp9861_c0_seq1 158bp	Bomo_Chr27
845	O_BomoFB10761_complete:A_BomoFB_comp9861_c0_seq1 135bp	Bomo_Chr27	PREDICTED:_uncharacterized_protein_C12orf74_homolog_[Acanthisitta_chloris]
846	O_BomoFB10762_5prime_partial:A_BomoFB_comp9861_c0_seq1 120bp	Bomo_Chr27	hypothetical_protein_EMCG_02055_[Emmonsia_crescens_UAMH_3008]
847	O_BomoFB10763_complete:A_BomoFB_comp9862_c0_seq1 281bp	Bomo_Chr4	PREDICTED:_uncharacterized_protein_LOC101735801_isoform_X2_[Bombyx_mori]	GO:0005215 F transporter activity GO:0005622 C intracellular anatomical structure GO:0006810 P transport GO:0016020 C membrane
848	O_BomoFB10764_complete:A_BomoFB_comp9862_c0_seq2 214bp	Bomo_Chr4	PREDICTED:_uncharacterized_protein_LOC101735801_isoform_X2_[Bombyx_mori]
849	O_BomoFB10765_complete:A_BomoFB_comp9863_c0_seq1 798bp	Bomo_Chr21	hypothetical_protein_KGM_04775_[Danaus_plexippus]	GO:0000339 F RNA cap binding GO:0000398 P mRNA splicing, via spliceosome GO:0003723 F RNA binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0005846 C nuclear cap binding complex GO:0006370 P 7-methylguanosine mRNA capping GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0016070 P RNA metabolic process GO:0016246 P RNA interference GO:0022008 P neurogenesis GO:0030422 P production of siRNA involved in RNA interference GO:0031047 P gene silencing by RNA GO:0031053 P primary miRNA processing GO:0035195 P gene silencing by miRNA GO:0045071 P negative regulation of viral genome replication GO:0045292 P mRNA cis splicing, via spliceosome GO:0051028 P mRNA transport GO:0071011 C precatalytic spliceosome GO:0071013 C catalytic step 2 spliceosome
850	O_BomoFB10766_complete:A_BomoFB_comp9863_c0_seq1 107bp	Bomo_Chr21	hypothetical_protein_[Aliagarivorans_taiwanensis]
851	O_BomoFB10767_internal:A_BomoFB_comp9864_c0_seq1 218bp	Bomo_Chr25	Retinol_dehydrogenase_13_[Papilio_xuthus]	GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0008152 P metabolic process GO:0009644 P response to high light intensity GO:0010842 P retina layer formation GO:0016491 F oxidoreductase activity GO:0042462 P eye photoreceptor cell development GO:0042572 P retinol metabolic process GO:0052650 F NADP-retinol dehydrogenase activity GO:0055114 P obsolete oxidation-reduction process
852	O_BomoFB10768_complete:A_BomoFB_comp9864_c0_seq1 158bp	Bomo_Chr25	PREDICTED:_ras_GTPase-activating_protein_nGAP_isoform_X4_[Capra_hircus]
853	O_BomoFB10769_5prime_partial:A_BomoFB_comp9864_c0_seq2 351bp	Bomo_Chr25	PREDICTED:_retinol_dehydrogenase_13-like_[Papilio_polytes]	GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0008152 P metabolic process GO:0009644 P response to high light intensity GO:0010842 P retina layer formation GO:0016491 F oxidoreductase activity GO:0042462 P eye photoreceptor cell development GO:0042572 P retinol metabolic process GO:0052650 F NADP-retinol dehydrogenase activity GO:0055114 P obsolete oxidation-reduction process
854	O_BomoFB1076_3prime_partial:A_BomoFB_comp2867_c0_seq1 136bp	Bomo_Chr20	63_kDa_sperm_flagellar_membrane_protein_[Camponotus_floridanus]
855	O_BomoFB10770_complete:A_BomoFB_comp9864_c0_seq2 158bp	Bomo_Chr25	PREDICTED:_ras_GTPase-activating_protein_nGAP_isoform_X4_[Capra_hircus]
856	O_BomoFB10771_complete:A_BomoFB_comp9865_c0_seq1 199bp	Bomo_Chr6	PREDICTED:_ATP-dependent_RNA_helicase_DDX18-like_isoform_X2_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0004004 F RNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005730 C nucleolus GO:0010501 P RNA secondary structure unwinding GO:0016020 C membrane GO:0016787 F hydrolase activity GO:0044822 F RNA binding
857	O_BomoFB10772_complete:A_BomoFB_comp9865_c0_seq1 109bp	Bomo_Chr6	PREDICTED:_ATP-dependent_RNA_helicase_DDX18-like_isoform_X2_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0004004 F RNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0010501 P RNA secondary structure unwinding GO:0016787 F hydrolase activity
858	O_BomoFB10773_complete:A_BomoFB_comp9865_c0_seq2 354bp	Bomo_Chr6	PREDICTED:_ATP-dependent_RNA_helicase_DDX18-like_isoform_X2_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0004004 F RNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005730 C nucleolus GO:0010501 P RNA secondary structure unwinding GO:0016020 C membrane GO:0016787 F hydrolase activity GO:0044822 F RNA binding
859	O_BomoFB10774_complete:A_BomoFB_comp9866_c0_seq1 184bp	Bomo_Chr25	hypothetical_protein_KGM_22037_[Danaus_plexippus]	GO:0000104 F succinate dehydrogenase activity GO:0005739 C mitochondrion GO:0005740 C mitochondrial envelope GO:0005743 C mitochondrial inner membrane GO:0005749 C mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) GO:0006099 P tricarboxylic acid cycle GO:0008177 F succinate dehydrogenase (ubiquinone) activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0020037 F heme binding GO:0046872 F metal ion binding GO:0048039 F ubiquinone binding GO:0055114 P obsolete oxidation-reduction process
860	O_BomoFB10775_3prime_partial:A_BomoFB_comp9869_c0_seq1 118bp	Bomo_Chr9	PREDICTED:_leucine-rich_repeat-containing_protein_C10orf11-like_[Amyelois_transitella]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0030154 P cell differentiation GO:0030318 P melanocyte differentiation
861	O_BomoFB10776_complete:A_BomoFB_comp9869_c0_seq2 101bp	Bomo_Chr9	PREDICTED:_leucine-rich_repeat-containing_protein_C10orf11-like_[Amyelois_transitella]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0030154 P cell differentiation GO:0030318 P melanocyte differentiation
862	O_BomoFB10777_5prime_partial:A_BomoFB_comp9870_c0_seq2 785bp	Bomo_Chr14	PREDICTED:_alpha-N-acetylglucosaminidase_isoform_X1_[Bombyx_mori]	GO:0004561 F alpha-N-acetylglucosaminidase activity GO:0005764 C lysosome GO:0006027 P glycosaminoglycan catabolic process GO:0007040 P lysosome organization GO:0007399 P nervous system development GO:0008152 P metabolic process GO:0016787 F hydrolase activity GO:0016798 F hydrolase activity, acting on glycosyl bonds GO:0021680 P cerebellar Purkinje cell layer development GO:0042474 P middle ear morphogenesis GO:0043202 C lysosomal lumen GO:0045475 P locomotor rhythm GO:0046548 P retinal rod cell development GO:0060119 P inner ear receptor cell development GO:0070062 C extracellular exosome
863	O_BomoFB10778_5prime_partial:A_BomoFB_comp9870_c0_seq3 785bp	Bomo_Chr14	PREDICTED:_alpha-N-acetylglucosaminidase_isoform_X1_[Bombyx_mori]	GO:0004561 F alpha-N-acetylglucosaminidase activity GO:0005764 C lysosome GO:0006027 P glycosaminoglycan catabolic process GO:0007040 P lysosome organization GO:0007399 P nervous system development GO:0008152 P metabolic process GO:0016787 F hydrolase activity GO:0016798 F hydrolase activity, acting on glycosyl bonds GO:0021680 P cerebellar Purkinje cell layer development GO:0042474 P middle ear morphogenesis GO:0043202 C lysosomal lumen GO:0045475 P locomotor rhythm GO:0046548 P retinal rod cell development GO:0060119 P inner ear receptor cell development GO:0070062 C extracellular exosome
864	O_BomoFB10779_complete:A_BomoFB_comp9870_c0_seq3 154bp	Bomo_Chr14	recombinase_RecD_[Clostridium_sp._GD3]
865	O_BomoFB1077_5prime_partial:A_BomoFB_comp2868_c0_seq1 497bp	Bomo_Chr22	PREDICTED:_calcium_uptake_protein_1,_mitochondrial-like_isoform_X2_[Papilio_polytes]	GO:0005509 F calcium ion binding GO:0005739 C mitochondrion GO:0005758 C mitochondrial intermembrane space GO:0006810 P transport GO:0006811 P ion transport GO:0006816 P calcium ion transport GO:0046872 F metal ion binding GO:0051561 P positive regulation of mitochondrial calcium ion concentration
866	O_BomoFB10780_complete:A_BomoFB_comp9871_c0_seq1 740bp	Bomo_Chr24	PREDICTED:_heterogeneous_nuclear_ribonucleoprotein_U-like,_partial_[Papilio_polytes]	GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0008150 P biological_process GO:0016020 C membrane GO:0044822 F RNA binding
867	O_BomoFB10781_3prime_partial:A_BomoFB_comp9871_c0_seq1 229bp	Bomo_Chr24	PREDICTED:_heterogeneous_nuclear_ribonucleoprotein_U-like_protein_2_[Plutella_xylostella]	GO:0003723 F RNA binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006396 P RNA processing GO:0009615 P response to virus GO:0019899 F enzyme binding GO:0030529 C ribonucleoprotein complex GO:0044822 F RNA binding
868	O_BomoFB10782_complete:A_BomoFB_comp9871_c0_seq1 102bp	Bomo_Chr24
869	O_BomoFB10783_complete:A_BomoFB_comp9871_c0_seq1 100bp	Bomo_Chr24	uncharacterized_protein_Dana_GF11382,_isoform_C_[Drosophila_ananassae]
870	O_BomoFB10784_complete:A_BomoFB_comp9871_c0_seq2 740bp	Bomo_Chr24	PREDICTED:_heterogeneous_nuclear_ribonucleoprotein_U-like,_partial_[Papilio_polytes]	GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0008150 P biological_process GO:0016020 C membrane GO:0044822 F RNA binding