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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3061 O_BomoFB12756_5prime_partial:A_BomoFB_comp10281_c1_seq3
125bp
 flagellar_hook-associated_protein_FlgL_[Candidatus_Midichloria_mitochondrii]
3062 O_BomoFB12757_complete:A_BomoFB_comp10281_c1_seq4
338bp
 uricase_[Bombyx_mori]
GO:0004846 F urate oxidase activity
GO:0005777 C peroxisome
GO:0006144 P purine nucleobase metabolic process
GO:0016491 F oxidoreductase activity
GO:0019628 P urate catabolic process
GO:0055114 P obsolete oxidation-reduction process
3063 O_BomoFB12758_3prime_partial:A_BomoFB_comp10282_c0_seq1
803bp
 PREDICTED:_exosome_complex_exonuclease_RRP44_isoform_X1_[Amyelois_transitella]
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000176 C nuclear exosome (RNase complex)
GO:0000177 C cytoplasmic exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004527 F exonuclease activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006402 P mRNA catabolic process
GO:0016020 C membrane
GO:0016075 P rRNA catabolic process
GO:0016787 F hydrolase activity
GO:0043547 P positive regulation of GTPase activity
GO:0071034 P CUT catabolic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
3064 O_BomoFB12759_internal:A_BomoFB_comp10282_c0_seq2
393bp
 PREDICTED:_exosome_complex_exonuclease_RRP44_[Bombyx_mori]
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000176 C nuclear exosome (RNase complex)
GO:0000177 C cytoplasmic exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004527 F exonuclease activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006402 P mRNA catabolic process
GO:0016020 C membrane
GO:0016075 P rRNA catabolic process
GO:0016787 F hydrolase activity
GO:0043547 P positive regulation of GTPase activity
GO:0071034 P CUT catabolic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
3065 O_BomoFB1275_3prime_partial:A_BomoFB_comp3063_c0_seq1
440bp
 PREDICTED:_protein_lin-54_homolog_[Bombyx_mori]
3066 O_BomoFB12760_complete:A_BomoFB_comp10283_c0_seq1
1237bp
 PREDICTED:_inhibitor_of_Bruton_tyrosine_kinase_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0016020 C membrane
3067 O_BomoFB12761_complete:A_BomoFB_comp10283_c0_seq1
133bp
 aminotransferase_class_I/II_[Zunongwangia_profunda]
3068 O_BomoFB12762_complete:A_BomoFB_comp10283_c0_seq1
105bp
 propanediol_dehydratase_[Geodermatophilaceae_bacterium_URHA0031]
3069 O_BomoFB12763_complete:A_BomoFB_comp10286_c0_seq1
100bp
3070 O_BomoFB12764_complete:A_BomoFB_comp10286_c1_seq3
192bp
 chromobox-like_protein_5_[Bombyx_mori]
GO:0000118 C histone deacetylase complex
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000784 C chromosome, telomeric region
GO:0000792 C heterochromatin
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005720 C heterochromatin
GO:0005721 C pericentric heterochromatin
GO:0005730 C nucleolus
GO:0010369 C chromocenter
GO:0016605 C PML body
GO:0017053 C transcription repressor complex
GO:0030674 F protein-macromolecule adaptor activity
GO:0035064 F methylated histone binding
GO:0035097 C histone methyltransferase complex
GO:0042803 F protein homodimerization activity
GO:0042826 F histone deacetylase binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0070491 F DNA-binding transcription factor binding
3071 O_BomoFB12765_complete:A_BomoFB_comp10286_c1_seq3
112bp
 ABC_transporter_permease_[Subdoligranulum_sp._4_3_54A2FAA]
3072 O_BomoFB12766_complete:A_BomoFB_comp10286_c1_seq4
192bp
 chromobox-like_protein_5_[Bombyx_mori]
GO:0000118 C histone deacetylase complex
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000784 C chromosome, telomeric region
GO:0000792 C heterochromatin
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005720 C heterochromatin
GO:0005721 C pericentric heterochromatin
GO:0005730 C nucleolus
GO:0010369 C chromocenter
GO:0016605 C PML body
GO:0017053 C transcription repressor complex
GO:0030674 F protein-macromolecule adaptor activity
GO:0035064 F methylated histone binding
GO:0035097 C histone methyltransferase complex
GO:0042803 F protein homodimerization activity
GO:0042826 F histone deacetylase binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0070491 F DNA-binding transcription factor binding
3073 O_BomoFB12767_complete:A_BomoFB_comp10286_c2_seq3
307bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
3074 O_BomoFB12768_complete:A_BomoFB_comp10286_c2_seq6
328bp
 PREDICTED:_serrate_RNA_effector_molecule_homolog_[Amyelois_transitella]
3075 O_BomoFB12769_complete:A_BomoFB_comp10286_c2_seq6
182bp
 Solute_carrier_family_2,_facilitated_glucose_transporter_member_5,_partial_[Ophiophagus_hannah]
3076 O_BomoFB1276_5prime_partial:A_BomoFB_comp3065_c0_seq1
115bp
 PREDICTED:_protein_sel-1_homolog_2,_partial_[Equus_przewalskii]
3077 O_BomoFB12770_complete:A_BomoFB_comp10286_c2_seq8
215bp
 PREDICTED:_calcium_release-activated_calcium_channel_protein_1-like_isoform_X4_[Bombyx_mori]
GO:0002115 P store-operated calcium entry
GO:0004252 F serine-type endopeptidase activity
GO:0005262 F calcium channel activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006508 P proteolysis
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0007399 P nervous system development
GO:0015279 F store-operated calcium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
GO:0051928 P positive regulation of calcium ion transport
GO:0070588 P calcium ion transmembrane transport
GO:1903779 P regulation of cardiac conduction
3078 O_BomoFB12771_internal:A_BomoFB_comp10289_c0_seq1
457bp
 putative_CAD_trifunctional_protein,_partial_[Bombyx_mori]
GO:0000050 P urea cycle
GO:0000166 F nucleotide binding
GO:0001889 P liver development
GO:0003824 F catalytic activity
GO:0004070 F aspartate carbamoyltransferase activity
GO:0004087 F carbamoyl-phosphate synthase (ammonia) activity
GO:0004088 F carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
GO:0004151 F dihydroorotase activity
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006207 P 'de novo' pyrimidine nucleobase biosynthetic process
GO:0006221 P pyrimidine nucleotide biosynthetic process
GO:0006228 P UTP biosynthetic process
GO:0006520 P cellular amino acid metabolic process
GO:0006526 P arginine biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0006807 P nitrogen compound metabolic process
GO:0007507 P heart development
GO:0007565 P female pregnancy
GO:0007595 P lactation
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0014075 P response to amine
GO:0016020 C membrane
GO:0016363 C nuclear matrix
GO:0016597 F amino acid binding
GO:0016740 F transferase activity
GO:0016743 F carboxyl- or carbamoyltransferase activity
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0016812 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
GO:0016874 F ligase activity
GO:0017144 P xenobiotic metabolic process
GO:0018107 P peptidyl-threonine phosphorylation
GO:0019899 F enzyme binding
GO:0031000 P response to caffeine
GO:0031100 P animal organ regeneration
GO:0033574 P response to testosterone
GO:0035690 P cellular response to xenobiotic stimulus
GO:0042802 F identical protein binding
GO:0042995 C cell projection
GO:0043025 C neuronal cell body
GO:0043195 C terminal bouton
GO:0043234 C protein-containing complex
GO:0044205 P 'de novo' UMP biosynthetic process
GO:0046134 P pyrimidine nucleoside biosynthetic process
GO:0046777 P protein autophosphorylation
GO:0046872 F metal ion binding
GO:0051414 P response to cortisol
GO:0070062 C extracellular exosome
GO:0070335 F aspartate binding
GO:0071364 P cellular response to epidermal growth factor stimulus
3079 O_BomoFB12772_complete:A_BomoFB_comp10289_c0_seq2
1677bp
 PREDICTED:_CAD_protein_isoform_X1_[Amyelois_transitella]
GO:0000050 P urea cycle
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004070 F aspartate carbamoyltransferase activity
GO:0004087 F carbamoyl-phosphate synthase (ammonia) activity
GO:0004088 F carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
GO:0004151 F dihydroorotase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006207 P 'de novo' pyrimidine nucleobase biosynthetic process
GO:0006221 P pyrimidine nucleotide biosynthetic process
GO:0006520 P cellular amino acid metabolic process
GO:0006526 P arginine biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0006807 P nitrogen compound metabolic process
GO:0008152 P metabolic process
GO:0016597 F amino acid binding
GO:0016740 F transferase activity
GO:0016743 F carboxyl- or carbamoyltransferase activity
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0016812 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
GO:0016874 F ligase activity
GO:0044205 P 'de novo' UMP biosynthetic process
GO:0046872 F metal ion binding
GO:0070406 F glutamine binding
3080 O_BomoFB12773_complete:A_BomoFB_comp10289_c0_seq2
109bp
 Uncharacterised_protein_[Bordetella_pertussis]
3081 O_BomoFB12774_complete:A_BomoFB_comp10290_c0_seq1
200bp
 PREDICTED:_BAG_family_molecular_chaperone_regulator_2-like_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0006457 P protein folding
GO:0019538 P protein metabolic process
GO:0042802 F identical protein binding
GO:0051087 F chaperone binding
3082 O_BomoFB12775_complete:A_BomoFB_comp10290_c0_seq1
133bp
 hypothetical_protein_VHEMI02269_[Torrubiella_hemipterigena]
3083 O_BomoFB12776_complete:A_BomoFB_comp10290_c0_seq2
301bp
 hypothetical_protein_RR46_04746_[Papilio_xuthus]
3084 O_BomoFB12777_complete:A_BomoFB_comp10290_c0_seq2
271bp
 PREDICTED:_putative_nuclease_HARBI1_[Solenopsis_invicta]
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
3085 O_BomoFB12778_complete:A_BomoFB_comp10290_c0_seq2
137bp
 hypothetical_protein_FF38_07250_[Lucilia_cuprina]
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0042802 F identical protein binding
3086 O_BomoFB12779_complete:A_BomoFB_comp10290_c0_seq3
156bp
 PREDICTED:_BAG_family_molecular_chaperone_regulator_2-like_isoform_X1_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0006457 P protein folding
GO:0019538 P protein metabolic process
GO:0042802 F identical protein binding
GO:0051087 F chaperone binding
3087 O_BomoFB1277_5prime_partial:A_BomoFB_comp3065_c0_seq2
321bp
 PREDICTED:_transcriptional_activator_protein_Pur-alpha_isoform_X1_[Bombyx_mori]
GO:0000784 C chromosome, telomeric region
GO:0000900 F translation repressor activity, mRNA regulatory element binding
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003691 F double-stranded telomeric DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005662 C DNA replication factor A complex
GO:0005737 C cytoplasm
GO:0006268 P DNA unwinding involved in DNA replication
GO:0006270 P DNA replication initiation
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007399 P nervous system development
GO:0008134 F transcription factor binding
GO:0008284 P positive regulation of cell population proliferation
GO:0017148 P negative regulation of translation
GO:0030154 P cell differentiation
GO:0030425 C dendrite
GO:0032422 F purine-rich negative regulatory element binding
GO:0042127 P regulation of cell population proliferation
GO:0043025 C neuronal cell body
GO:0044822 F RNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046332 F SMAD binding
3088 O_BomoFB12780_complete:A_BomoFB_comp10290_c0_seq3
133bp
 hypothetical_protein_VHEMI02269_[Torrubiella_hemipterigena]
3089 O_BomoFB12781_complete:A_BomoFB_comp10290_c0_seq4
366bp
 PREDICTED:_putative_nuclease_HARBI1_[Linepithema_humile]
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
3090 O_BomoFB12782_complete:A_BomoFB_comp10290_c0_seq4
301bp
 hypothetical_protein_RR46_04746_[Papilio_xuthus]
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