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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2911 O_BomoFB12620_complete:A_BomoFB_comp10254_c0_seq1
103bp
 hypothetical_protein_[Butyrivibrio_fibrisolvens]
2912 O_BomoFB12621_5prime_partial:A_BomoFB_comp10255_c0_seq1
162bp
 PREDICTED:_uncharacterized_protein_LOC105843021_[Bombyx_mori]
2913 O_BomoFB12622_complete:A_BomoFB_comp10256_c0_seq1
738bp
 PREDICTED:_ankyrin_repeat_domain-containing_protein_12_isoform_X3_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
2914 O_BomoFB12623_complete:A_BomoFB_comp10256_c0_seq1
146bp
 succinylglutamate-semialdehyde_dehydrogenase_[Acinetobacter_venetianus]
2915 O_BomoFB12624_complete:A_BomoFB_comp10256_c0_seq1
100bp
2916 O_BomoFB12625_complete:A_BomoFB_comp10256_c0_seq2
798bp
 PREDICTED:_ankyrin_repeat_domain-containing_protein_12_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
2917 O_BomoFB12626_complete:A_BomoFB_comp10256_c0_seq2
146bp
 succinylglutamate-semialdehyde_dehydrogenase_[Acinetobacter_venetianus]
2918 O_BomoFB12627_complete:A_BomoFB_comp10256_c0_seq2
100bp
2919 O_BomoFB12628_complete:A_BomoFB_comp10256_c0_seq3
652bp
 PREDICTED:_ankyrin_repeat_domain-containing_protein_12_isoform_X3_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
2920 O_BomoFB12629_complete:A_BomoFB_comp10256_c0_seq3
146bp
 succinylglutamate-semialdehyde_dehydrogenase_[Acinetobacter_venetianus]
2921 O_BomoFB1262_3prime_partial:A_BomoFB_comp3048_c0_seq1
343bp
 PREDICTED:_protein_AATF_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006357 P regulation of transcription by RNA polymerase II
2922 O_BomoFB12630_complete:A_BomoFB_comp10256_c0_seq3
100bp
2923 O_BomoFB12631_complete:A_BomoFB_comp10256_c0_seq4
582bp
 PREDICTED:_ankyrin_repeat_domain-containing_protein_12_isoform_X3_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
2924 O_BomoFB12632_complete:A_BomoFB_comp10256_c0_seq4
146bp
 succinylglutamate-semialdehyde_dehydrogenase_[Acinetobacter_venetianus]
2925 O_BomoFB12633_complete:A_BomoFB_comp10256_c0_seq4
100bp
2926 O_BomoFB12634_5prime_partial:A_BomoFB_comp10257_c0_seq1
199bp
 putative_pol-like_protein_[Danaus_plexippus]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
2927 O_BomoFB12635_5prime_partial:A_BomoFB_comp10257_c0_seq2
263bp
 putative_pol-like_protein_[Danaus_plexippus]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
2928 O_BomoFB12636_complete:A_BomoFB_comp10257_c0_seq2
103bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Solenopsis_invicta]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
2929 O_BomoFB12637_5prime_partial:A_BomoFB_comp10257_c0_seq3
265bp
 putative_pol-like_protein_[Danaus_plexippus]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
2930 O_BomoFB12638_complete:A_BomoFB_comp10257_c0_seq3
103bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Solenopsis_invicta]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
2931 O_BomoFB12639_5prime_partial:A_BomoFB_comp10257_c0_seq4
412bp
 putative_pol-like_protein_[Danaus_plexippus]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
2932 O_BomoFB1263_internal:A_BomoFB_comp3050_c0_seq1
416bp
 PREDICTED:_uncharacterized_protein_LOC101738796_[Bombyx_mori]
2933 O_BomoFB12640_complete:A_BomoFB_comp10257_c0_seq4
162bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Solenopsis_invicta]
2934 O_BomoFB12641_complete:A_BomoFB_comp10259_c0_seq1
490bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Amyelois_transitella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
2935 O_BomoFB12642_5prime_partial:A_BomoFB_comp10259_c0_seq2
525bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Amyelois_transitella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
2936 O_BomoFB12643_complete:A_BomoFB_comp10259_c0_seq5
185bp
 PREDICTED:_LDLR_chaperone_boca_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006612 P protein targeting to membrane
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0012505 C endomembrane system
GO:0016055 P Wnt signaling pathway
GO:0032799 P low-density lipoprotein receptor particle metabolic process
GO:0045177 C apical part of cell
GO:0048477 P oogenesis
GO:0048728 P proboscis development
2937 O_BomoFB12644_internal:A_BomoFB_comp10260_c1_seq1
366bp
 PREDICTED:_protein_IWS1_homolog_isoform_X2_[Bombyx_mori]
2938 O_BomoFB12645_5prime_partial:A_BomoFB_comp10260_c1_seq1
215bp
2939 O_BomoFB12646_3prime_partial:A_BomoFB_comp10260_c1_seq2
328bp
 PREDICTED:_protein_IWS1_homolog_isoform_X2_[Bombyx_mori]
2940 O_BomoFB12647_5prime_partial:A_BomoFB_comp10260_c1_seq2
215bp
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