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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2371 O_BomoFB12134_complete:A_BomoFB_comp10157_c0_seq2
1013bp
 PREDICTED:_uncharacterized_protein_LOC105391048_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
2372 O_BomoFB12135_complete:A_BomoFB_comp10157_c0_seq2
271bp
 PREDICTED:_uncharacterized_protein_LOC105842598_[Bombyx_mori]
2373 O_BomoFB12136_complete:A_BomoFB_comp10158_c0_seq2
387bp
 PREDICTED:_synapse-associated_protein_of_47_kDa_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0007268 P chemical synaptic transmission
GO:0008306 P associative learning
GO:0045202 C synapse
GO:0048172 P regulation of short-term neuronal synaptic plasticity
2374 O_BomoFB12137_complete:A_BomoFB_comp10158_c0_seq2
240bp
 class_II_fructose-bisphosphate_aldolase_[Arsenophonus_endosymbiont_of_Nilaparvata_lugens]
2375 O_BomoFB12138_complete:A_BomoFB_comp10158_c0_seq2
195bp
 hypothetical_protein_EAG_11636_[Camponotus_floridanus]
2376 O_BomoFB12139_5prime_partial:A_BomoFB_comp10158_c0_seq2
111bp
2377 O_BomoFB1213_complete:A_BomoFB_comp2991_c0_seq1
207bp
2378 O_BomoFB12140_complete:A_BomoFB_comp10158_c0_seq3
408bp
 PREDICTED:_synapse-associated_protein_of_47_kDa_isoform_X2_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0007268 P chemical synaptic transmission
GO:0008306 P associative learning
GO:0045202 C synapse
GO:0048172 P regulation of short-term neuronal synaptic plasticity
2379 O_BomoFB12141_complete:A_BomoFB_comp10158_c0_seq3
173bp
 hypothetical_protein_DAPPUDRAFT_20079,_partial_[Daphnia_pulex]
2380 O_BomoFB12142_5prime_partial:A_BomoFB_comp10158_c0_seq3
111bp
2381 O_BomoFB12143_complete:A_BomoFB_comp10158_c0_seq3
106bp
2382 O_BomoFB12144_3prime_partial:A_BomoFB_comp10159_c0_seq1
729bp
 PREDICTED:_dystroglycan_[Amyelois_transitella]
GO:0002011 P morphogenesis of an epithelial sheet
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0006509 P membrane protein ectodomain proteolysis
GO:0006607 P NLS-bearing protein import into nucleus
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0008307 F structural constituent of muscle
GO:0009279 C cell outer membrane
GO:0010470 P regulation of gastrulation
GO:0010717 P regulation of epithelial to mesenchymal transition
GO:0014044 P Schwann cell development
GO:0015631 F tubulin binding
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016011 C dystroglycan complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017166 F vinculin binding
GO:0019048 P modulation by virus of host process
GO:0021682 P nerve maturation
GO:0022011 P myelination in peripheral nervous system
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0030336 P negative regulation of cell migration
GO:0033268 C node of Ranvier
GO:0034453 P microtubule anchoring
GO:0035556 P intracellular signal transduction
GO:0042169 F SH2 domain binding
GO:0042383 C sarcolemma
GO:0043237 F laminin-1 binding
GO:0043409 P negative regulation of MAPK cascade
GO:0045121 C membrane raft
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0051393 F alpha-actinin binding
GO:0051898 P negative regulation of protein kinase B signaling
GO:0060441 P epithelial tube branching involved in lung morphogenesis
GO:0060445 P branching involved in salivary gland morphogenesis
GO:0070062 C extracellular exosome
GO:0070938 C contractile ring
GO:0071679 P commissural neuron axon guidance
GO:0071711 P basement membrane organization
GO:1904261 P positive regulation of basement membrane assembly involved in embryonic body morphogenesis
2383 O_BomoFB12145_5prime_partial:A_BomoFB_comp10159_c0_seq1
133bp
2384 O_BomoFB12146_5prime_partial:A_BomoFB_comp10159_c0_seq1
121bp
 preprotein_translocase_SecA_[Streptomyces_sp._303MFCol5.2]
2385 O_BomoFB12147_complete:A_BomoFB_comp10159_c0_seq1
117bp
2386 O_BomoFB12148_3prime_partial:A_BomoFB_comp10159_c0_seq2
682bp
 PREDICTED:_dystroglycan_[Amyelois_transitella]
GO:0002011 P morphogenesis of an epithelial sheet
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0006509 P membrane protein ectodomain proteolysis
GO:0006607 P NLS-bearing protein import into nucleus
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0008307 F structural constituent of muscle
GO:0009279 C cell outer membrane
GO:0010470 P regulation of gastrulation
GO:0010717 P regulation of epithelial to mesenchymal transition
GO:0014044 P Schwann cell development
GO:0015631 F tubulin binding
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016011 C dystroglycan complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017166 F vinculin binding
GO:0019048 P modulation by virus of host process
GO:0021682 P nerve maturation
GO:0022011 P myelination in peripheral nervous system
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0030336 P negative regulation of cell migration
GO:0033268 C node of Ranvier
GO:0034453 P microtubule anchoring
GO:0035556 P intracellular signal transduction
GO:0042169 F SH2 domain binding
GO:0042383 C sarcolemma
GO:0043237 F laminin-1 binding
GO:0043409 P negative regulation of MAPK cascade
GO:0045121 C membrane raft
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0051393 F alpha-actinin binding
GO:0051898 P negative regulation of protein kinase B signaling
GO:0060441 P epithelial tube branching involved in lung morphogenesis
GO:0060445 P branching involved in salivary gland morphogenesis
GO:0070062 C extracellular exosome
GO:0070938 C contractile ring
GO:0071679 P commissural neuron axon guidance
GO:0071711 P basement membrane organization
GO:1904261 P positive regulation of basement membrane assembly involved in embryonic body morphogenesis
2387 O_BomoFB12149_5prime_partial:A_BomoFB_comp10159_c0_seq2
133bp
2388 O_BomoFB1214_5prime_partial:A_BomoFB_comp2991_c0_seq1
139bp
2389 O_BomoFB12150_5prime_partial:A_BomoFB_comp10159_c0_seq2
121bp
 preprotein_translocase_SecA_[Streptomyces_sp._303MFCol5.2]
2390 O_BomoFB12151_complete:A_BomoFB_comp10159_c0_seq2
117bp
2391 O_BomoFB12152_complete:A_BomoFB_comp10160_c0_seq1
897bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
2392 O_BomoFB12153_5prime_partial:A_BomoFB_comp10160_c0_seq1
151bp
 PREDICTED:_uncharacterized_protein_LOC101738214_[Bombyx_mori]
2393 O_BomoFB12154_internal:A_BomoFB_comp10161_c0_seq1
115bp
 PREDICTED:_uncharacterized_protein_LOC101743310_isoform_X5_[Bombyx_mori]
2394 O_BomoFB12155_internal:A_BomoFB_comp10163_c0_seq1
2392bp
 PREDICTED:_laminin_subunit_alpha_[Bombyx_mori]
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0005102 F signaling receptor binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005605 C basement membrane
GO:0007155 P cell adhesion
GO:0007411 P axon guidance
GO:0007417 P central nervous system development
GO:0007422 P peripheral nervous system development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0008021 C synaptic vesicle
GO:0009887 P animal organ morphogenesis
GO:0009888 P tissue development
GO:0010906 P regulation of glucose metabolic process
GO:0016321 P female meiosis chromosome segregation
GO:0030054 C cell junction
GO:0030155 P regulation of cell adhesion
GO:0030334 P regulation of cell migration
GO:0030424 C axon
GO:0031410 C cytoplasmic vesicle
GO:0031987 P locomotion involved in locomotory behavior
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0035001 P dorsal trunk growth, open tracheal system
GO:0035011 P melanotic encapsulation of foreign target
GO:0036062 C presynaptic periactive zone
GO:0042995 C cell projection
GO:0045202 C synapse
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0045995 P regulation of embryonic development
GO:0048598 P embryonic morphogenesis
GO:0048854 P brain morphogenesis
2395 O_BomoFB12156_5prime_partial:A_BomoFB_comp10163_c0_seq1
237bp
2396 O_BomoFB12157_complete:A_BomoFB_comp10163_c0_seq1
175bp
 signal_recognition_particle_[Micromonospora_rosaria]
2397 O_BomoFB12158_complete:A_BomoFB_comp10163_c0_seq1
106bp
 merzoite_surface_protein_1_[Plasmodium_reichenowi]
2398 O_BomoFB12159_complete:A_BomoFB_comp10163_c0_seq1
105bp
2399 O_BomoFB1215_5prime_partial:A_BomoFB_comp2993_c0_seq1
348bp
 PREDICTED:_GPN-loop_GTPase_1-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
2400 O_BomoFB12160_3prime_partial:A_BomoFB_comp10163_c0_seq2
257bp
 PREDICTED:_laminin_subunit_alpha_[Bombyx_mori]
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0005102 F signaling receptor binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005605 C basement membrane
GO:0007155 P cell adhesion
GO:0007411 P axon guidance
GO:0007417 P central nervous system development
GO:0007422 P peripheral nervous system development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0008021 C synaptic vesicle
GO:0009887 P animal organ morphogenesis
GO:0009888 P tissue development
GO:0010906 P regulation of glucose metabolic process
GO:0016321 P female meiosis chromosome segregation
GO:0030054 C cell junction
GO:0030155 P regulation of cell adhesion
GO:0030334 P regulation of cell migration
GO:0030424 C axon
GO:0031410 C cytoplasmic vesicle
GO:0031987 P locomotion involved in locomotory behavior
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0035001 P dorsal trunk growth, open tracheal system
GO:0035011 P melanotic encapsulation of foreign target
GO:0036062 C presynaptic periactive zone
GO:0042995 C cell projection
GO:0045202 C synapse
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0045995 P regulation of embryonic development
GO:0048598 P embryonic morphogenesis
GO:0048854 P brain morphogenesis
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