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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2251 O_BomoFB12026_complete:A_BomoFB_comp10124_c0_seq16
445bp
 PREDICTED:_WD_repeat-containing_protein_24-like_[Amyelois_transitella]
2252 O_BomoFB12027_complete:A_BomoFB_comp10124_c0_seq16
118bp
 hypothetical_protein_THAOC_19290,_partial_[Thalassiosira_oceanica]
2253 O_BomoFB12028_complete:A_BomoFB_comp10124_c0_seq16
113bp
2254 O_BomoFB12029_5prime_partial:A_BomoFB_comp10124_c0_seq16
103bp
2255 O_BomoFB1202_5prime_partial:A_BomoFB_comp2983_c0_seq1
151bp
 PREDICTED:_beta-1,4-N-acetylgalactosaminyltransferase_bre-4-like_isoform_X1_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0005975 P carbohydrate metabolic process
GO:0006486 P protein glycosylation
GO:0008376 F acetylgalactosaminyltransferase activity
GO:0009636 P response to toxic substance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0033207 F beta-1,4-N-acetylgalactosaminyltransferase activity
GO:0045747 P positive regulation of Notch signaling pathway
GO:0046872 F metal ion binding
GO:0075015 P formation of infection structure
2256 O_BomoFB12030_complete:A_BomoFB_comp10124_c0_seq17
240bp
 PREDICTED:_WD_repeat-containing_protein_24_[Papilio_polytes]
2257 O_BomoFB12031_5prime_partial:A_BomoFB_comp10124_c0_seq17
105bp
 RND_family_efflux_transporter_MFP_subunit_[Paenibacillus_senegalensis]
2258 O_BomoFB12032_complete:A_BomoFB_comp10124_c0_seq18
445bp
 PREDICTED:_WD_repeat-containing_protein_24-like_[Amyelois_transitella]
2259 O_BomoFB12033_complete:A_BomoFB_comp10124_c0_seq18
118bp
 hypothetical_protein_THAOC_19290,_partial_[Thalassiosira_oceanica]
2260 O_BomoFB12034_complete:A_BomoFB_comp10124_c0_seq18
113bp
2261 O_BomoFB12035_3prime_partial:A_BomoFB_comp10124_c0_seq18
110bp
 PREDICTED:_WD_repeat-containing_protein_24-like_[Amyelois_transitella]
2262 O_BomoFB12036_5prime_partial:A_BomoFB_comp10124_c0_seq18
106bp
 myosin-1_[Exophiala_spinifera]
2263 O_BomoFB12037_complete:A_BomoFB_comp10125_c0_seq1
968bp
 alanine--tRNA_ligase,_cytoplasmic_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004813 F alanine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006419 P alanyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0043039 P tRNA aminoacylation
GO:0046872 F metal ion binding
2264 O_BomoFB12038_internal:A_BomoFB_comp10126_c0_seq1
245bp
 PREDICTED:_E3_ubiquitin-protein_ligase_UBR5_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0019904 F protein domain specific binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0050847 P progesterone receptor signaling pathway
GO:0061630 F ubiquitin protein ligase activity
GO:1901315 P negative regulation of histone H2A K63-linked ubiquitination
GO:2000780 P negative regulation of double-strand break repair
2265 O_BomoFB12039_complete:A_BomoFB_comp10126_c0_seq1
161bp
2266 O_BomoFB1203_complete:A_BomoFB_comp2986_c0_seq1
222bp
 PREDICTED:_uncharacterized_protein_LOC106117054_[Papilio_xuthus]
2267 O_BomoFB12040_internal:A_BomoFB_comp10126_c0_seq2
1101bp
 PREDICTED:_E3_ubiquitin-protein_ligase_UBR5_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0003723 F RNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007112 P male meiosis cytokinesis
GO:0007281 P germ cell development
GO:0007283 P spermatogenesis
GO:0007289 P spermatid nucleus differentiation
GO:0007444 P imaginal disc development
GO:0007446 P imaginal disc growth
GO:0007455 P eye-antennal disc morphogenesis
GO:0008270 F zinc ion binding
GO:0008585 P female gonad development
GO:0016874 F ligase activity
GO:0030162 P regulation of proteolysis
GO:0034450 F ubiquitin-ubiquitin ligase activity
GO:0042127 P regulation of cell population proliferation
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043130 F ubiquitin binding
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0046872 F metal ion binding
GO:0048749 P compound eye development
2268 O_BomoFB12041_complete:A_BomoFB_comp10126_c0_seq2
161bp
2269 O_BomoFB12042_3prime_partial:A_BomoFB_comp10126_c0_seq3
1553bp
 PREDICTED:_E3_ubiquitin-protein_ligase_UBR5_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0003723 F RNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007112 P male meiosis cytokinesis
GO:0007281 P germ cell development
GO:0007283 P spermatogenesis
GO:0007289 P spermatid nucleus differentiation
GO:0007444 P imaginal disc development
GO:0007446 P imaginal disc growth
GO:0007455 P eye-antennal disc morphogenesis
GO:0008270 F zinc ion binding
GO:0008585 P female gonad development
GO:0016874 F ligase activity
GO:0030162 P regulation of proteolysis
GO:0034450 F ubiquitin-ubiquitin ligase activity
GO:0042127 P regulation of cell population proliferation
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043130 F ubiquitin binding
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0046872 F metal ion binding
GO:0048749 P compound eye development
2270 O_BomoFB12043_complete:A_BomoFB_comp10126_c0_seq3
224bp
2271 O_BomoFB12044_complete:A_BomoFB_comp10126_c0_seq3
138bp
2272 O_BomoFB12045_3prime_partial:A_BomoFB_comp10126_c0_seq4
2409bp
 PREDICTED:_E3_ubiquitin-protein_ligase_UBR5_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0003723 F RNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007112 P male meiosis cytokinesis
GO:0007281 P germ cell development
GO:0007283 P spermatogenesis
GO:0007289 P spermatid nucleus differentiation
GO:0007444 P imaginal disc development
GO:0007446 P imaginal disc growth
GO:0007455 P eye-antennal disc morphogenesis
GO:0008270 F zinc ion binding
GO:0008585 P female gonad development
GO:0016874 F ligase activity
GO:0030162 P regulation of proteolysis
GO:0034450 F ubiquitin-ubiquitin ligase activity
GO:0042127 P regulation of cell population proliferation
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043130 F ubiquitin binding
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0046872 F metal ion binding
GO:0048749 P compound eye development
2273 O_BomoFB12046_complete:A_BomoFB_comp10126_c0_seq4
224bp
2274 O_BomoFB12047_complete:A_BomoFB_comp10126_c0_seq4
138bp
2275 O_BomoFB12048_3prime_partial:A_BomoFB_comp10127_c0_seq3
252bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
2276 O_BomoFB12049_3prime_partial:A_BomoFB_comp10127_c0_seq3
209bp
 PREDICTED:_uncharacterized_protein_LOC105841565_[Bombyx_mori]
2277 O_BomoFB1204_complete:A_BomoFB_comp2987_c0_seq1
330bp
 PREDICTED:_multivesicular_body_subunit_12A_[Papilio_xuthus]
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017124 F SH3 domain binding
GO:0031902 C late endosome membrane
2278 O_BomoFB12050_5prime_partial:A_BomoFB_comp10127_c0_seq3
130bp
2279 O_BomoFB12051_complete:A_BomoFB_comp10128_c0_seq1
768bp
 PREDICTED:_protein_zer-1_homolog_[Amyelois_transitella]
GO:0004842 F ubiquitin-protein transferase activity
GO:0016567 P protein ubiquitination
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0051438 P regulation of ubiquitin-protein transferase activity
2280 O_BomoFB12052_complete:A_BomoFB_comp10128_c0_seq1
129bp
 site-specific_recombinase_XerD_[Frankia_sp._Thr]
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