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GO:0000166	F	nucleotide binding
GO:0000178	C	exosome (RNase complex)
GO:0000398	P	mRNA splicing, via spliceosome
GO:0000460	P	maturation of 5.8S rRNA
GO:0003676	F	nucleic acid binding
GO:0003723	F	RNA binding
GO:0003724	F	RNA helicase activity
GO:0004386	F	helicase activity
GO:0005515	F	protein binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005681	C	spliceosomal complex
GO:0005730	C	nucleolus
GO:0006364	P	rRNA processing
GO:0006397	P	mRNA processing
GO:0006401	P	RNA catabolic process
GO:0008380	P	RNA splicing
GO:0016787	F	hydrolase activity
GO:0044822	F	RNA binding
GO:0071013	C	catalytic step 2 spliceosome

128

O_BomoFB10115_5prime_partial:A_BomoFB_comp9711_c0_seq1

798bp

Bomo_Chr17

Transposon_Ty3-G_Gag-Pol_polyprotein_[Papilio_machaon]

GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0003723	F	RNA binding
GO:0003824	F	catalytic activity
GO:0003887	F	DNA-directed DNA polymerase activity
GO:0003964	F	RNA-directed DNA polymerase activity
GO:0004190	F	aspartic-type endopeptidase activity
GO:0004518	F	nuclease activity
GO:0004519	F	endonuclease activity
GO:0005575	C	cellular_component
GO:0006278	P	RNA-dependent DNA biosynthetic process
GO:0006310	P	DNA recombination
GO:0006508	P	proteolysis
GO:0008152	P	metabolic process
GO:0008233	F	peptidase activity
GO:0015074	P	DNA integration
GO:0016740	F	transferase activity
GO:0016779	F	nucleotidyltransferase activity
GO:0016787	F	hydrolase activity
GO:0046872	F	metal ion binding
GO:0071897	P	DNA biosynthetic process
GO:0090305	P	nucleic acid phosphodiester bond hydrolysis

129

O_BomoFB10116_5prime_partial:A_BomoFB_comp9711_c0_seq2

798bp

Bomo_Chr14

Transposon_Ty3-G_Gag-Pol_polyprotein_[Papilio_machaon]

GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0003723	F	RNA binding
GO:0003824	F	catalytic activity
GO:0003887	F	DNA-directed DNA polymerase activity
GO:0003964	F	RNA-directed DNA polymerase activity
GO:0004190	F	aspartic-type endopeptidase activity
GO:0004518	F	nuclease activity
GO:0004519	F	endonuclease activity
GO:0005575	C	cellular_component
GO:0006278	P	RNA-dependent DNA biosynthetic process
GO:0006310	P	DNA recombination
GO:0006508	P	proteolysis
GO:0008152	P	metabolic process
GO:0008233	F	peptidase activity
GO:0015074	P	DNA integration
GO:0016740	F	transferase activity
GO:0016779	F	nucleotidyltransferase activity
GO:0016787	F	hydrolase activity
GO:0046872	F	metal ion binding
GO:0071897	P	DNA biosynthetic process
GO:0090305	P	nucleic acid phosphodiester bond hydrolysis

130

O_BomoFB10117_3prime_partial:A_BomoFB_comp9712_c0_seq1

417bp

Bomo_Chr25

PREDICTED:_pre-mRNA-processing_factor_39_isoform_X2_[Papilio_polytes]

GO:0000243	C	commitment complex
GO:0000381	P	regulation of alternative mRNA splicing, via spliceosome
GO:0000395	P	mRNA 5'-splice site recognition
GO:0000398	P	mRNA splicing, via spliceosome
GO:0005634	C	nucleus
GO:0005685	C	U1 snRNP
GO:0006396	P	RNA processing
GO:0006397	P	mRNA processing
GO:0008380	P	RNA splicing
GO:0030627	F	pre-mRNA 5'-splice site binding
GO:0071004	C	U2-type prespliceosome

131

O_BomoFB10118_complete:A_BomoFB_comp9712_c0_seq1

115bp

Bomo_Chr25

hypothetical_protein_DRE_02227_[Drechslerella_stenobrocha_248]

132

O_BomoFB10119_complete:A_BomoFB_comp9712_c0_seq1

101bp

Bomo_Chr25

cell_wall_alpha-1,3-glucan_synthase_ags1_[Neosartorya_udagawae]

133

O_BomoFB1011_3prime_partial:A_BomoFB_comp2807_c0_seq1

116bp

Bomo_Chr11

134

O_BomoFB10120_3prime_partial:A_BomoFB_comp9712_c0_seq2

268bp

Bomo_Chr25

PREDICTED:_pre-mRNA-processing_factor_39_isoform_X2_[Amyelois_transitella]

GO:0000243	C	commitment complex
GO:0000381	P	regulation of alternative mRNA splicing, via spliceosome
GO:0000395	P	mRNA 5'-splice site recognition
GO:0000398	P	mRNA splicing, via spliceosome
GO:0005634	C	nucleus
GO:0005685	C	U1 snRNP
GO:0006396	P	RNA processing
GO:0006397	P	mRNA processing
GO:0008380	P	RNA splicing
GO:0030627	F	pre-mRNA 5'-splice site binding
GO:0071004	C	U2-type prespliceosome

135

O_BomoFB10121_complete:A_BomoFB_comp9712_c0_seq2

101bp

Bomo_Chr25

136

O_BomoFB10122_3prime_partial:A_BomoFB_comp9712_c0_seq3

761bp

Bomo_Chr25

PREDICTED:_pre-mRNA-processing_factor_39_isoform_X1_[Amyelois_transitella]

GO:0000243	C	commitment complex
GO:0000395	P	mRNA 5'-splice site recognition
GO:0005634	C	nucleus
GO:0005685	C	U1 snRNP
GO:0006396	P	RNA processing
GO:0006397	P	mRNA processing
GO:0008380	P	RNA splicing
GO:0030627	F	pre-mRNA 5'-splice site binding
GO:0071004	C	U2-type prespliceosome

137

O_BomoFB10123_complete:A_BomoFB_comp9712_c0_seq3

115bp

Bomo_Chr25

hypothetical_protein_DRE_02227_[Drechslerella_stenobrocha_248]

138

O_BomoFB10124_complete:A_BomoFB_comp9712_c0_seq3

101bp

Bomo_Chr25

cell_wall_alpha-1,3-glucan_synthase_ags1_[Neosartorya_udagawae]

139

O_BomoFB10125_complete:A_BomoFB_comp9712_c0_seq3

101bp

Bomo_Chr25

140

O_BomoFB10126_complete:A_BomoFB_comp9713_c0_seq1

246bp

Bomo_Chr22

PREDICTED:_rab-like_protein_3_isoform_X1_[Amyelois_transitella]

GO:0000166	F	nucleotide binding
GO:0005525	F	GTP binding
GO:0005622	C	intracellular anatomical structure
GO:0007264	P	small GTPase mediated signal transduction
GO:0015031	P	protein transport

141

O_BomoFB10127_3prime_partial:A_BomoFB_comp9713_c0_seq2

416bp

Bomo_Chr22

PREDICTED:_general_transcription_factor_IIE_subunit_1_isoform_X2_[Bombyx_mori]

GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006367	P	transcription initiation from RNA polymerase II promoter
GO:0043565	F	sequence-specific DNA binding
GO:0046872	F	metal ion binding

142

O_BomoFB10128_complete:A_BomoFB_comp9713_c0_seq2

222bp

Bomo_Chr22

143

O_BomoFB10129_complete:A_BomoFB_comp9714_c0_seq1

404bp

Bomo_Chr19

PREDICTED:_adipokinetic_hormone_receptor_isoform_X1_[Bombyx_mori]

GO:0004871	F	obsolete signal transducer activity
GO:0004930	F	G protein-coupled receptor activity
GO:0004968	F	gonadotropin-releasing hormone receptor activity
GO:0005886	C	plasma membrane
GO:0007165	P	signal transduction
GO:0007186	P	G protein-coupled receptor signaling pathway
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0016500	F	protein-hormone receptor activity
GO:0097211	P	cellular response to gonadotropin-releasing hormone

144

O_BomoFB1012_complete:A_BomoFB_comp2808_c0_seq1

686bp

Bomo_Chr4

PREDICTED:_rho_guanine_nucleotide_exchange_factor_7_[Papilio_xuthus]

GO:0000322	C	storage vacuole
GO:0001726	C	ruffle
GO:0002244	P	hematopoietic progenitor cell differentiation
GO:0005085	F	guanyl-nucleotide exchange factor activity
GO:0005089	F	guanyl-nucleotide exchange factor activity
GO:0005515	F	protein binding
GO:0005737	C	cytoplasm
GO:0005829	C	cytosol
GO:0005886	C	plasma membrane
GO:0005925	C	focal adhesion
GO:0005938	C	cell cortex
GO:0007030	P	Golgi organization
GO:0007165	P	signal transduction
GO:0007399	P	nervous system development
GO:0010763	P	positive regulation of fibroblast migration
GO:0019901	F	protein kinase binding
GO:0030027	C	lamellipodium
GO:0030032	P	lamellipodium assembly
GO:0030054	C	cell junction
GO:0032092	P	positive regulation of protein binding
GO:0035023	P	regulation of Rho protein signal transduction
GO:0035556	P	intracellular signal transduction
GO:0042059	P	negative regulation of epidermal growth factor receptor signaling pathway
GO:0042995	C	cell projection
GO:0043005	C	neuron projection
GO:0043025	C	neuronal cell body
GO:0043065	P	positive regulation of apoptotic process
GO:0043234	C	protein-containing complex
GO:0043547	P	positive regulation of GTPase activity
GO:0048013	P	ephrin receptor signaling pathway
GO:0048041	P	focal adhesion assembly
GO:0051056	P	regulation of small GTPase mediated signal transduction
GO:0060124	P	positive regulation of growth hormone secretion
GO:1900026	P	positive regulation of substrate adhesion-dependent cell spreading
GO:1904424	P	regulation of GTP binding
GO:2000394	P	positive regulation of lamellipodium morphogenesis

145

O_BomoFB10130_complete:A_BomoFB_comp9716_c0_seq1

314bp

Bomo_Chr19

PREDICTED:_RING_finger_and_CHY_zinc_finger_domain-containing_protein_1_[Papilio_polytes]

GO:0000151	C	ubiquitin ligase complex
GO:0002039	F	p53 binding
GO:0004842	F	ubiquitin-protein transferase activity
GO:0005102	F	signaling receptor binding
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005737	C	cytoplasm
GO:0008270	F	zinc ion binding
GO:0016567	P	protein ubiquitination
GO:0016607	C	nuclear speck
GO:0016874	F	ligase activity
GO:0031398	P	positive regulation of protein ubiquitination
GO:0032436	P	positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042787	P	ubiquitin-dependent protein catabolic process
GO:0042803	F	protein homodimerization activity
GO:0046872	F	metal ion binding
GO:0051865	P	protein autoubiquitination

146

O_BomoFB10131_complete:A_BomoFB_comp9716_c0_seq1

231bp

Bomo_Chr19

phosphoketolase_[Trichosporon_asahii_var._asahii_CBS_2479]

147

O_BomoFB10132_complete:A_BomoFB_comp9716_c0_seq1

193bp

Bomo_Chr19

PREDICTED:_centrosomal_protein_of_152_kDa_isoform_X3_[Chinchilla_lanigera]

148

O_BomoFB10133_complete:A_BomoFB_comp9716_c0_seq2

314bp

Bomo_Scaf003

PREDICTED:_RING_finger_and_CHY_zinc_finger_domain-containing_protein_1_[Papilio_polytes]

GO:0000151	C	ubiquitin ligase complex
GO:0002039	F	p53 binding
GO:0004842	F	ubiquitin-protein transferase activity
GO:0005102	F	signaling receptor binding
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005737	C	cytoplasm
GO:0008270	F	zinc ion binding
GO:0016567	P	protein ubiquitination
GO:0016607	C	nuclear speck
GO:0016874	F	ligase activity
GO:0031398	P	positive regulation of protein ubiquitination
GO:0032436	P	positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042787	P	ubiquitin-dependent protein catabolic process
GO:0042803	F	protein homodimerization activity
GO:0046872	F	metal ion binding
GO:0051865	P	protein autoubiquitination