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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7921 O_BomoEE1712_complete:A_BomoEE_comp32445_c0_seq1
196bp
7922 O_BomoEE17130_complete:A_BomoEE_comp68842_c0_seq4
294bp
 PREDICTED:_serine/threonine-protein_kinase_Nek8-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006468 P protein phosphorylation
GO:0007368 P determination of left/right symmetry
GO:0007507 P heart development
GO:0009887 P animal organ morphogenesis
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035330 P regulation of hippo signaling
GO:0042995 C cell projection
GO:0046872 F metal ion binding
GO:0072372 C cilium
GO:0097543 C ciliary inversin compartment
GO:0097546 C ciliary base
7923 O_BomoEE17131_complete:A_BomoEE_comp68842_c0_seq4
249bp
 U2_small_nuclear_ribonucleoprotein_A'_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
7924 O_BomoEE17132_complete:A_BomoEE_comp68844_c0_seq1
498bp
 PREDICTED:_nuclear_factor_of_activated_T-cells_5_isoform_X3_[Bombyx_mori]
7925 O_BomoEE17133_complete:A_BomoEE_comp68844_c0_seq1
124bp
7926 O_BomoEE17134_complete:A_BomoEE_comp68844_c0_seq1
118bp
7927 O_BomoEE17135_complete:A_BomoEE_comp68844_c0_seq1
106bp
7928 O_BomoEE17136_complete:A_BomoEE_comp68845_c0_seq2
492bp
 cytochrome_P450_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
7929 O_BomoEE17137_complete:A_BomoEE_comp68846_c0_seq1
349bp
 Regulation_of_nuclear_pre-mRNA_domain-containing_protein_1B_[Operophtera_brumata]
GO:0000993 F RNA polymerase II complex binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008284 P positive regulation of cell population proliferation
GO:0010564 P regulation of cell cycle process
GO:0016591 C RNA polymerase II, holoenzyme
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070940 P dephosphorylation of RNA polymerase II C-terminal domain
7930 O_BomoEE17138_complete:A_BomoEE_comp68846_c0_seq2
303bp
 Regulation_of_nuclear_pre-mRNA_domain-containing_protein_1B_[Operophtera_brumata]
GO:0016591 C RNA polymerase II, holoenzyme
GO:0070940 P dephosphorylation of RNA polymerase II C-terminal domain
7931 O_BomoEE17139_complete:A_BomoEE_comp68847_c0_seq1
223bp
 methylthioribose-1-phosphate_isomerase_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008652 P cellular amino acid biosynthetic process
GO:0009086 P methionine biosynthetic process
GO:0016853 F isomerase activity
GO:0019284 P L-methionine salvage from S-adenosylmethionine
GO:0019509 P L-methionine salvage from methylthioadenosine
GO:0044237 P cellular metabolic process
GO:0044249 P cellular biosynthetic process
GO:0046523 F S-methyl-5-thioribose-1-phosphate isomerase activity
7932 O_BomoEE1713_complete:A_BomoEE_comp32471_c0_seq1
149bp
 Uncharacterized_protein_OBRU01_14001_[Operophtera_brumata]
7933 O_BomoEE17140_complete:A_BomoEE_comp68847_c0_seq1
130bp
 methylthioribose-1-phosphate_isomerase_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008652 P cellular amino acid biosynthetic process
GO:0009086 P methionine biosynthetic process
GO:0016853 F isomerase activity
GO:0019284 P L-methionine salvage from S-adenosylmethionine
GO:0019509 P L-methionine salvage from methylthioadenosine
GO:0044237 P cellular metabolic process
GO:0044249 P cellular biosynthetic process
GO:0046523 F S-methyl-5-thioribose-1-phosphate isomerase activity
7934 O_BomoEE17141_complete:A_BomoEE_comp68847_c0_seq2
223bp
 methylthioribose-1-phosphate_isomerase_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008652 P cellular amino acid biosynthetic process
GO:0009086 P methionine biosynthetic process
GO:0016853 F isomerase activity
GO:0019284 P L-methionine salvage from S-adenosylmethionine
GO:0019509 P L-methionine salvage from methylthioadenosine
GO:0044237 P cellular metabolic process
GO:0044249 P cellular biosynthetic process
GO:0046523 F S-methyl-5-thioribose-1-phosphate isomerase activity
7935 O_BomoEE17142_complete:A_BomoEE_comp68847_c0_seq3
223bp
 methylthioribose-1-phosphate_isomerase_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008652 P cellular amino acid biosynthetic process
GO:0009086 P methionine biosynthetic process
GO:0016853 F isomerase activity
GO:0019284 P L-methionine salvage from S-adenosylmethionine
GO:0019509 P L-methionine salvage from methylthioadenosine
GO:0044237 P cellular metabolic process
GO:0044249 P cellular biosynthetic process
GO:0046523 F S-methyl-5-thioribose-1-phosphate isomerase activity
7936 O_BomoEE17143_complete:A_BomoEE_comp68847_c0_seq4
353bp
 methylthioribose-1-phosphate_isomerase_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008652 P cellular amino acid biosynthetic process
GO:0009086 P methionine biosynthetic process
GO:0016853 F isomerase activity
GO:0019284 P L-methionine salvage from S-adenosylmethionine
GO:0019509 P L-methionine salvage from methylthioadenosine
GO:0044237 P cellular metabolic process
GO:0044249 P cellular biosynthetic process
GO:0046523 F S-methyl-5-thioribose-1-phosphate isomerase activity
7937 O_BomoEE17144_complete:A_BomoEE_comp68848_c0_seq1
276bp
 PREDICTED:_uncharacterized_protein_LOC106130363_[Amyelois_transitella]
7938 O_BomoEE17145_complete:A_BomoEE_comp68848_c0_seq1
121bp
7939 O_BomoEE17146_5prime_partial:A_BomoEE_comp68849_c0_seq1
123bp
7940 O_BomoEE17147_complete:A_BomoEE_comp68851_c0_seq1
499bp
 PREDICTED:_COPII_coat_assembly_protein_SEC16_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003680 F minor groove of adenine-thymine-rich DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007455 P eye-antennal disc morphogenesis
GO:0007478 P leg disc morphogenesis
GO:0007548 P sex differentiation
GO:0046660 P female sex differentiation
GO:0048070 P regulation of developmental pigmentation
GO:0048071 P sex-specific pigmentation
GO:0048086 P negative regulation of developmental pigmentation
GO:0048092 P negative regulation of male pigmentation
7941 O_BomoEE17148_complete:A_BomoEE_comp68857_c0_seq1
308bp
 cell_differentiation_protein_RCD1_homolog_[Bombyx_mori]
GO:0000932 C P-body
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006402 P mRNA catabolic process
GO:0006417 P regulation of translation
GO:0017148 P negative regulation of translation
GO:0030014 C CCR4-NOT complex
GO:0030015 C CCR4-NOT core complex
GO:0031047 P gene silencing by RNA
GO:0033147 P negative regulation of intracellular estrogen receptor signaling pathway
GO:2000327 P obsolete positive regulation of nuclear receptor transcription coactivator activity
7942 O_BomoEE17149_complete:A_BomoEE_comp68857_c0_seq1
120bp
7943 O_BomoEE1714_complete:A_BomoEE_comp32478_c0_seq1
514bp
 serine_protease_inhibitor_10_precursor_[Bombyx_mori]
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
7944 O_BomoEE17150_complete:A_BomoEE_comp68859_c1_seq2
155bp
 PREDICTED:_ubiquitin-conjugating_enzyme_E2_W_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006513 P protein monoubiquitination
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0006974 P cellular response to DNA damage stimulus
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
GO:0071218 P cellular response to misfolded protein
7945 O_BomoEE17151_complete:A_BomoEE_comp68859_c1_seq3
120bp
 PREDICTED:_histone_H2A,_sperm-like_[Plutella_xylostella]
GO:0000786 C nucleosome
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0046982 F protein heterodimerization activity
7946 O_BomoEE17152_complete:A_BomoEE_comp68859_c1_seq5
155bp
 PREDICTED:_ubiquitin-conjugating_enzyme_E2_W_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006513 P protein monoubiquitination
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0006974 P cellular response to DNA damage stimulus
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
GO:0071218 P cellular response to misfolded protein
7947 O_BomoEE17153_complete:A_BomoEE_comp68859_c1_seq6
155bp
 PREDICTED:_ubiquitin-conjugating_enzyme_E2_W_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006513 P protein monoubiquitination
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0006974 P cellular response to DNA damage stimulus
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
GO:0071218 P cellular response to misfolded protein
7948 O_BomoEE17154_complete:A_BomoEE_comp68859_c1_seq6
120bp
 PREDICTED:_histone_H2A,_sperm-like_[Plutella_xylostella]
GO:0000786 C nucleosome
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0046982 F protein heterodimerization activity
7949 O_BomoEE17155_complete:A_BomoEE_comp68861_c0_seq2
1254bp
 PREDICTED:_uncharacterized_protein_LOC101746815_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006974 P cellular response to DNA damage stimulus
GO:0008150 P biological_process
7950 O_BomoEE17156_5prime_partial:A_BomoEE_comp68863_c0_seq1
150bp
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