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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7891 O_BomoEE17102_complete:A_BomoEE_comp68822_c0_seq5
720bp
 PREDICTED:_flap_endonuclease_GEN_isoform_X1_[Bombyx_mori]
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000738 P DNA catabolic process, exonucleolytic
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004520 F endodeoxyribonuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008310 F single-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0008311 F double-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0016787 F hydrolase activity
GO:0035312 F 5'-3' exodeoxyribonuclease activity
GO:0046872 F metal ion binding
7892 O_BomoEE17103_complete:A_BomoEE_comp68822_c0_seq6
533bp
 PREDICTED:_flap_endonuclease_GEN_isoform_X3_[Bombyx_mori]
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000738 P DNA catabolic process, exonucleolytic
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004520 F endodeoxyribonuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008310 F single-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0008311 F double-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0016787 F hydrolase activity
GO:0035312 F 5'-3' exodeoxyribonuclease activity
GO:0046872 F metal ion binding
7893 O_BomoEE17104_complete:A_BomoEE_comp68822_c0_seq6
129bp
 PREDICTED:_flap_endonuclease_GEN_isoform_X3_[Bombyx_mori]
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000738 P DNA catabolic process, exonucleolytic
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004520 F endodeoxyribonuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008310 F single-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0008311 F double-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0016787 F hydrolase activity
GO:0035312 F 5'-3' exodeoxyribonuclease activity
GO:0046872 F metal ion binding
7894 O_BomoEE17105_complete:A_BomoEE_comp68824_c0_seq1
490bp
 PREDICTED:_multidrug_resistance_protein_homolog_49-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001666 P response to hypoxia
GO:0005524 F ATP binding
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006855 P xenobiotic transmembrane transport
GO:0008152 P metabolic process
GO:0008354 P germ cell migration
GO:0008559 F ABC-type xenobiotic transporter activity
GO:0015238 F xenobiotic transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0031427 P response to methotrexate
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042908 P xenobiotic transport
GO:0055085 P transmembrane transport
7895 O_BomoEE17106_complete:A_BomoEE_comp68824_c0_seq2
602bp
 PREDICTED:_multidrug_resistance_protein_homolog_49-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001666 P response to hypoxia
GO:0005524 F ATP binding
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006855 P xenobiotic transmembrane transport
GO:0008152 P metabolic process
GO:0008354 P germ cell migration
GO:0008559 F ABC-type xenobiotic transporter activity
GO:0015238 F xenobiotic transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0031427 P response to methotrexate
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042908 P xenobiotic transport
GO:0055085 P transmembrane transport
7896 O_BomoEE17107_complete:A_BomoEE_comp68824_c0_seq2
114bp
 PREDICTED:_multidrug_resistance_protein_homolog_49-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002481 P antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent
GO:0002485 P antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent
GO:0002489 P antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent
GO:0002591 P positive regulation of antigen processing and presentation of peptide antigen via MHC class I
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006855 P xenobiotic transmembrane transport
GO:0008152 P metabolic process
GO:0008559 F ABC-type xenobiotic transporter activity
GO:0015562 F efflux transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0030154 P cell differentiation
GO:0042391 P regulation of membrane potential
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042908 P xenobiotic transport
GO:0048058 P compound eye corneal lens development
GO:0055085 P transmembrane transport
7897 O_BomoEE17108_complete:A_BomoEE_comp68824_c0_seq2
110bp
7898 O_BomoEE17109_complete:A_BomoEE_comp68824_c0_seq3
792bp
 PREDICTED:_multidrug_resistance_protein_homolog_49-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001666 P response to hypoxia
GO:0005524 F ATP binding
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006855 P xenobiotic transmembrane transport
GO:0008152 P metabolic process
GO:0008354 P germ cell migration
GO:0008559 F ABC-type xenobiotic transporter activity
GO:0015238 F xenobiotic transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0031427 P response to methotrexate
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042908 P xenobiotic transport
GO:0055085 P transmembrane transport
7899 O_BomoEE1710_complete:A_BomoEE_comp32437_c0_seq1
185bp
 PREDICTED:_zinc_finger_protein_271-like_[Papilio_xuthus]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
7900 O_BomoEE17110_complete:A_BomoEE_comp68824_c0_seq3
110bp
7901 O_BomoEE17111_complete:A_BomoEE_comp68824_c0_seq4
1316bp
 PREDICTED:_multidrug_resistance_protein_homolog_49-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005919 C pleated septate junction
GO:0006810 P transport
GO:0006855 P xenobiotic transmembrane transport
GO:0008152 P metabolic process
GO:0008559 F ABC-type xenobiotic transporter activity
GO:0015562 F efflux transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0031427 P response to methotrexate
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042908 P xenobiotic transport
GO:0043190 C ATP-binding cassette (ABC) transporter complex
GO:0055085 P transmembrane transport
GO:0060857 P establishment of glial blood-brain barrier
7902 O_BomoEE17112_complete:A_BomoEE_comp68824_c0_seq4
109bp
7903 O_BomoEE17113_complete:A_BomoEE_comp68824_c0_seq5
638bp
 PREDICTED:_multidrug_resistance_protein_homolog_49-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001666 P response to hypoxia
GO:0005524 F ATP binding
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006855 P xenobiotic transmembrane transport
GO:0008152 P metabolic process
GO:0008354 P germ cell migration
GO:0008559 F ABC-type xenobiotic transporter activity
GO:0015238 F xenobiotic transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0031427 P response to methotrexate
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042908 P xenobiotic transport
GO:0055085 P transmembrane transport
7904 O_BomoEE17114_complete:A_BomoEE_comp68824_c0_seq5
602bp
 PREDICTED:_multidrug_resistance_protein_homolog_49-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001666 P response to hypoxia
GO:0005524 F ATP binding
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006855 P xenobiotic transmembrane transport
GO:0008152 P metabolic process
GO:0008354 P germ cell migration
GO:0008559 F ABC-type xenobiotic transporter activity
GO:0015238 F xenobiotic transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0031427 P response to methotrexate
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042908 P xenobiotic transport
GO:0055085 P transmembrane transport
7905 O_BomoEE17115_complete:A_BomoEE_comp68824_c0_seq5
109bp
7906 O_BomoEE17116_complete:A_BomoEE_comp68829_c0_seq1
102bp
 PREDICTED:_ARL14_effector_protein_[Amyelois_transitella]
GO:0005737 C cytoplasm
7907 O_BomoEE17117_complete:A_BomoEE_comp68829_c0_seq2
102bp
 PREDICTED:_ARL14_effector_protein_[Amyelois_transitella]
GO:0005737 C cytoplasm
7908 O_BomoEE17118_internal:A_BomoEE_comp68831_c0_seq1
533bp
 PREDICTED:_WD_repeat_and_FYVE_domain-containing_protein_3_[Bombyx_mori]
GO:0003831 F beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity
GO:0005515 F protein binding
GO:0005545 F 1-phosphatidylinositol binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0006914 P autophagy
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016234 C inclusion body
GO:0016239 P positive regulation of macroautophagy
GO:0016605 C PML body
GO:0019898 C extrinsic component of membrane
GO:0031965 C nuclear membrane
GO:0034274 C Atg12-Atg5-Atg16 complex
GO:0035973 P aggrephagy
GO:0046872 F metal ion binding
GO:0097635 C extrinsic component of autophagosome membrane
7909 O_BomoEE17119_internal:A_BomoEE_comp68831_c0_seq2
505bp
 PREDICTED:_WD_repeat_and_FYVE_domain-containing_protein_3_[Bombyx_mori]
GO:0003831 F beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity
GO:0005515 F protein binding
GO:0005545 F 1-phosphatidylinositol binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0006914 P autophagy
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016234 C inclusion body
GO:0016239 P positive regulation of macroautophagy
GO:0016605 C PML body
GO:0019898 C extrinsic component of membrane
GO:0031965 C nuclear membrane
GO:0034274 C Atg12-Atg5-Atg16 complex
GO:0035973 P aggrephagy
GO:0046872 F metal ion binding
GO:0097635 C extrinsic component of autophagosome membrane
7910 O_BomoEE1711_complete:A_BomoEE_comp32445_c0_seq1
1200bp
 PREDICTED:_pyruvate_carboxylase,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0004075 F biotin carboxylase activity
GO:0004736 F pyruvate carboxylase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006090 P pyruvate metabolic process
GO:0006094 P gluconeogenesis
GO:0006107 P oxaloacetate metabolic process
GO:0006629 P lipid metabolic process
GO:0006768 P biotin metabolic process
GO:0008152 P metabolic process
GO:0009374 F biotin binding
GO:0010629 P negative regulation of gene expression
GO:0016874 F ligase activity
GO:0019074 P viral RNA genome packaging
GO:0031406 F carboxylic acid binding
GO:0044791 P obsolete positive regulation by host of viral release from host cell
GO:0044794 P positive regulation by host of viral process
GO:0046872 F metal ion binding
7911 O_BomoEE17120_5prime_partial:A_BomoEE_comp68835_c1_seq1
419bp
 PREDICTED:_developmental_protein_eyes_absent_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006470 P protein dephosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007275 P multicellular organism development
GO:0007605 P sensory perception of sound
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0042474 P middle ear morphogenesis
GO:0046872 F metal ion binding
7912 O_BomoEE17121_5prime_partial:A_BomoEE_comp68835_c1_seq1
160bp
7913 O_BomoEE17122_complete:A_BomoEE_comp68835_c1_seq2
376bp
 PREDICTED:_developmental_protein_eyes_absent_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006470 P protein dephosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007275 P multicellular organism development
GO:0007601 P visual perception
GO:0007605 P sensory perception of sound
GO:0009653 P anatomical structure morphogenesis
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0046872 F metal ion binding
7914 O_BomoEE17123_5prime_partial:A_BomoEE_comp68836_c0_seq1
172bp
 hypothetical_protein_RR46_04068_[Papilio_xuthus]
7915 O_BomoEE17124_complete:A_BomoEE_comp68841_c0_seq1
216bp
 Uncharacterized_protein_OBRU01_05290_[Operophtera_brumata]
7916 O_BomoEE17125_5prime_partial:A_BomoEE_comp68841_c0_seq1
143bp
 PREDICTED:_uncharacterized_protein_LOC106139656_isoform_X4_[Amyelois_transitella]
7917 O_BomoEE17126_complete:A_BomoEE_comp68842_c0_seq1
294bp
 PREDICTED:_serine/threonine-protein_kinase_Nek8-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006468 P protein phosphorylation
GO:0007368 P determination of left/right symmetry
GO:0007507 P heart development
GO:0009887 P animal organ morphogenesis
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035330 P regulation of hippo signaling
GO:0042995 C cell projection
GO:0046872 F metal ion binding
GO:0072372 C cilium
GO:0097543 C ciliary inversin compartment
GO:0097546 C ciliary base
7918 O_BomoEE17127_complete:A_BomoEE_comp68842_c0_seq2
294bp
 PREDICTED:_serine/threonine-protein_kinase_Nek8-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006468 P protein phosphorylation
GO:0007368 P determination of left/right symmetry
GO:0007507 P heart development
GO:0009887 P animal organ morphogenesis
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035330 P regulation of hippo signaling
GO:0042995 C cell projection
GO:0046872 F metal ion binding
GO:0072372 C cilium
GO:0097543 C ciliary inversin compartment
GO:0097546 C ciliary base
7919 O_BomoEE17128_complete:A_BomoEE_comp68842_c0_seq2
259bp
 U2_small_nuclear_ribonucleoprotein_A'_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
7920 O_BomoEE17129_complete:A_BomoEE_comp68842_c0_seq3
294bp
 PREDICTED:_serine/threonine-protein_kinase_Nek8-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006468 P protein phosphorylation
GO:0007368 P determination of left/right symmetry
GO:0007507 P heart development
GO:0009887 P animal organ morphogenesis
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035330 P regulation of hippo signaling
GO:0042995 C cell projection
GO:0046872 F metal ion binding
GO:0072372 C cilium
GO:0097543 C ciliary inversin compartment
GO:0097546 C ciliary base
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