SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/95730
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
781 O_BomoEE10703_complete:A_BomoEE_comp64444_c0_seq2
186bp
 DNA_cytosine-5_methyltransferase_[Bombyx_mori]
GO:0001975 P response to amphetamine
GO:0003723 F RNA binding
GO:0003886 F DNA (cytosine-5-)-methyltransferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006400 P tRNA modification
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0008175 F tRNA methyltransferase activity
GO:0016428 F tRNA (cytosine-5-)-methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
GO:0090116 P C-5 methylation of cytosine
782 O_BomoEE10704_complete:A_BomoEE_comp64444_c0_seq2
160bp
 DNA_cytosine-5_methyltransferase_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0008175 F tRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
783 O_BomoEE10705_complete:A_BomoEE_comp64444_c0_seq3
186bp
 DNA_cytosine-5_methyltransferase_[Bombyx_mori]
GO:0001975 P response to amphetamine
GO:0003723 F RNA binding
GO:0003886 F DNA (cytosine-5-)-methyltransferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006400 P tRNA modification
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0008175 F tRNA methyltransferase activity
GO:0016428 F tRNA (cytosine-5-)-methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
GO:0090116 P C-5 methylation of cytosine
784 O_BomoEE10706_complete:A_BomoEE_comp64444_c0_seq3
160bp
 DNA_cytosine-5_methyltransferase_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0008175 F tRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
785 O_BomoEE10707_complete:A_BomoEE_comp64444_c0_seq3
157bp
 PREDICTED:_protein_JTB-like_[Plutella_xylostella]
GO:0000910 P cytokinesis
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008637 P apoptotic mitochondrial changes
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019901 F protein kinase binding
GO:0030496 C midbody
GO:0042127 P regulation of cell population proliferation
GO:0045860 P positive regulation of protein kinase activity
GO:0051301 P cell division
786 O_BomoEE10708_complete:A_BomoEE_comp64444_c0_seq4
337bp
 DNA_cytosine-5_methyltransferase_[Bombyx_mori]
GO:0001975 P response to amphetamine
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0008175 F tRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
787 O_BomoEE10709_complete:A_BomoEE_comp64448_c0_seq1
265bp
 PREDICTED:_uncharacterized_protein_LOC105841964_[Bombyx_mori]
788 O_BomoEE1070_3prime_partial:A_BomoEE_comp23943_c0_seq1
131bp
789 O_BomoEE10710_complete:A_BomoEE_comp64448_c0_seq2
280bp
 PREDICTED:_uncharacterized_protein_LOC105841964_[Bombyx_mori]
790 O_BomoEE10711_internal:A_BomoEE_comp64449_c0_seq1
228bp
 hypothetical_protein_KGM_00270_[Danaus_plexippus]
791 O_BomoEE10712_complete:A_BomoEE_comp64456_c0_seq1
836bp
 PREDICTED:_uncharacterized_protein_LOC101737763_[Bombyx_mori]
792 O_BomoEE10713_complete:A_BomoEE_comp64456_c0_seq2
821bp
 PREDICTED:_uncharacterized_protein_LOC101737763_[Bombyx_mori]
793 O_BomoEE10714_complete:A_BomoEE_comp64458_c1_seq1
175bp
 adenylate_cyclase_[Bombyx_mori]
794 O_BomoEE10715_complete:A_BomoEE_comp64462_c0_seq1
194bp
 PREDICTED:_dephospho-CoA_kinase_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0004140 F dephospho-CoA kinase activity
GO:0005524 F ATP binding
GO:0015937 P coenzyme A biosynthetic process
GO:0016310 P phosphorylation
795 O_BomoEE10716_complete:A_BomoEE_comp64462_c0_seq3
204bp
 PREDICTED:_dephospho-CoA_kinase_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0004140 F dephospho-CoA kinase activity
GO:0005524 F ATP binding
GO:0015937 P coenzyme A biosynthetic process
GO:0016310 P phosphorylation
796 O_BomoEE10717_complete:A_BomoEE_comp64462_c0_seq6
232bp
 PREDICTED:_dephospho-CoA_kinase_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0004140 F dephospho-CoA kinase activity
GO:0005524 F ATP binding
GO:0015937 P coenzyme A biosynthetic process
GO:0016310 P phosphorylation
797 O_BomoEE10718_internal:A_BomoEE_comp64463_c0_seq1
142bp
valyl-tRNA_synthetase_[Propionibacterium_acnes_JCM_18918]
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004832 F valine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006438 P valyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
798 O_BomoEE10719_complete:A_BomoEE_comp64470_c0_seq1
439bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_RNA-binding_protein_NOB1_[Bombyx_mori]
GO:0000469 P cleavage involved in rRNA processing
GO:0004521 F endoribonuclease activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0007601 P visual perception
GO:0030490 P maturation of SSU-rRNA
GO:0030688 C preribosome, small subunit precursor
GO:0042274 P ribosomal small subunit biogenesis
GO:0046872 F metal ion binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
799 O_BomoEE1071_5prime_partial:A_BomoEE_comp23944_c0_seq1
117bp
 PREDICTED:_uncharacterized_protein_LOC106100538_[Papilio_polytes]
800 O_BomoEE10720_complete:A_BomoEE_comp64470_c0_seq1
159bp
 PREDICTED:_UPF0528_protein_CG10038_[Amyelois_transitella]
801 O_BomoEE10721_complete:A_BomoEE_comp64470_c0_seq2
439bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_RNA-binding_protein_NOB1_[Bombyx_mori]
GO:0000469 P cleavage involved in rRNA processing
GO:0004521 F endoribonuclease activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0007601 P visual perception
GO:0030490 P maturation of SSU-rRNA
GO:0030688 C preribosome, small subunit precursor
GO:0042274 P ribosomal small subunit biogenesis
GO:0046872 F metal ion binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
802 O_BomoEE10722_complete:A_BomoEE_comp64470_c0_seq2
159bp
 PREDICTED:_UPF0528_protein_CG10038_[Amyelois_transitella]
803 O_BomoEE10723_complete:A_BomoEE_comp64470_c0_seq3
439bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_RNA-binding_protein_NOB1_[Bombyx_mori]
GO:0000469 P cleavage involved in rRNA processing
GO:0004521 F endoribonuclease activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0007601 P visual perception
GO:0030490 P maturation of SSU-rRNA
GO:0030688 C preribosome, small subunit precursor
GO:0042274 P ribosomal small subunit biogenesis
GO:0046872 F metal ion binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
804 O_BomoEE10724_complete:A_BomoEE_comp64470_c0_seq3
159bp
 PREDICTED:_UPF0528_protein_CG10038_[Amyelois_transitella]
805 O_BomoEE10725_complete:A_BomoEE_comp64471_c0_seq1
136bp
 PREDICTED:_peptidyl-prolyl_cis-trans_isomerase_isoform_X1_[Bombyx_mori]
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003677 F DNA binding
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0008152 P metabolic process
GO:0016853 F isomerase activity
806 O_BomoEE10726_complete:A_BomoEE_comp64471_c0_seq3
136bp
 PREDICTED:_peptidyl-prolyl_cis-trans_isomerase_isoform_X1_[Bombyx_mori]
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003677 F DNA binding
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0008152 P metabolic process
GO:0016853 F isomerase activity
807 O_BomoEE10727_complete:A_BomoEE_comp64471_c0_seq3
112bp
808 O_BomoEE10728_complete:A_BomoEE_comp64471_c0_seq4
112bp
809 O_BomoEE10729_complete:A_BomoEE_comp64472_c0_seq1
1810bp
 PREDICTED:_uncharacterized_protein_LOC101741655_[Bombyx_mori]
810 O_BomoEE1072_internal:A_BomoEE_comp23970_c0_seq1
117bp
 PREDICTED:_tyrosine-protein_kinase_Dnt-like_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0007416 P synapse assembly
GO:0007435 P salivary gland morphogenesis
GO:0007482 P haltere development
GO:0007611 P learning or memory
GO:0007613 P memory
GO:0008355 P olfactory learning
GO:0010906 P regulation of glucose metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0016199 P axon midline choice point recognition
GO:0016203 P muscle attachment
GO:0016204 P determination of muscle attachment site
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016319 P mushroom body development
GO:0016740 F transferase activity
GO:0017147 F Wnt-protein binding
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0019901 F protein kinase binding
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0030424 C axon
GO:0030425 C dendrite
GO:0042803 F protein homodimerization activity
GO:0042813 F Wnt-activated receptor activity
GO:0043235 C receptor complex
GO:0046982 F protein heterodimerization activity
GO:0061643 P chemorepulsion of axon
GO:0070983 P dendrite guidance
previous next from show/95730

- SilkBase 1999-2023 -