SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/95730
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
751 O_BomoEE10677_complete:A_BomoEE_comp64426_c0_seq2
158bp
 PREDICTED:_zinc_finger_protein_GLIS3-like_[Amyelois_transitella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0016607 C nuclear speck
GO:0031670 P cellular response to nutrient
GO:0042594 P response to starvation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048009 P insulin-like growth factor receptor signaling pathway
752 O_BomoEE10678_3prime_partial:A_BomoEE_comp64426_c0_seq2
152bp
 Zinc_finger_protein_GLIS2-like_protein_[Operophtera_brumata]
753 O_BomoEE10679_3prime_partial:A_BomoEE_comp64426_c0_seq3
361bp
 PREDICTED:_zinc_finger_protein_GLIS3-like_[Amyelois_transitella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0016607 C nuclear speck
GO:0031670 P cellular response to nutrient
GO:0042594 P response to starvation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048009 P insulin-like growth factor receptor signaling pathway
754 O_BomoEE1067_internal:A_BomoEE_comp23875_c0_seq1
104bp
hypothetical_protein_JCM18909_3559_[Propionibacterium_acnes_JCM_18909]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0055085 P transmembrane transport
755 O_BomoEE10680_3prime_partial:A_BomoEE_comp64426_c0_seq4
152bp
 Zinc_finger_protein_GLIS2-like_protein_[Operophtera_brumata]
756 O_BomoEE10681_complete:A_BomoEE_comp64426_c0_seq4
119bp
 PREDICTED:_zinc_finger_protein_GLIS3-like_[Amyelois_transitella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0016607 C nuclear speck
GO:0031670 P cellular response to nutrient
GO:0042594 P response to starvation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048009 P insulin-like growth factor receptor signaling pathway
757 O_BomoEE10682_complete:A_BomoEE_comp64427_c0_seq1
120bp
 PREDICTED:_complex_III_assembly_factor_LYRM7_[Papilio_machaon]
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
758 O_BomoEE10683_3prime_partial:A_BomoEE_comp64429_c0_seq1
109bp
759 O_BomoEE10684_5prime_partial:A_BomoEE_comp64429_c1_seq2
138bp
760 O_BomoEE10685_complete:A_BomoEE_comp64435_c0_seq3
247bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101743906_[Bombyx_mori]
761 O_BomoEE10686_internal:A_BomoEE_comp64439_c0_seq1
284bp
 PREDICTED:_cytospin-A-like_[Plutella_xylostella]
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005921 C gap junction
GO:0007049 P cell cycle
GO:0030054 C cell junction
GO:0051301 P cell division
762 O_BomoEE10687_internal:A_BomoEE_comp64439_c0_seq2
1143bp
 PREDICTED:_uncharacterized_protein_LOC101742265_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005921 C gap junction
GO:0007049 P cell cycle
GO:0030054 C cell junction
GO:0051301 P cell division
763 O_BomoEE10688_complete:A_BomoEE_comp64439_c0_seq2
179bp
764 O_BomoEE10689_5prime_partial:A_BomoEE_comp64439_c0_seq3
1051bp
 PREDICTED:_uncharacterized_protein_LOC101742265_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005921 C gap junction
GO:0007049 P cell cycle
GO:0030054 C cell junction
GO:0051301 P cell division
765 O_BomoEE1068_internal:A_BomoEE_comp23912_c0_seq1
174bp
lipid_A_export_ATP-binding/permease_protein_MsbA_[Propionibacterium_acnes_JCM_18918]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
766 O_BomoEE10690_complete:A_BomoEE_comp64439_c0_seq3
143bp
767 O_BomoEE10691_3prime_partial:A_BomoEE_comp64441_c0_seq1
581bp
 PREDICTED:_TELO2-interacting_protein_1_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0031931 C TORC1 complex
GO:0031932 C TORC2 complex
GO:0032006 P regulation of TOR signaling
768 O_BomoEE10692_complete:A_BomoEE_comp64441_c0_seq1
285bp
 PREDICTED:_TELO2-interacting_protein_1_homolog_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0031931 C TORC1 complex
GO:0031932 C TORC2 complex
GO:0032006 P regulation of TOR signaling
769 O_BomoEE10693_complete:A_BomoEE_comp64441_c0_seq1
138bp
770 O_BomoEE10694_complete:A_BomoEE_comp64441_c0_seq1
104bp
771 O_BomoEE10695_complete:A_BomoEE_comp64441_c0_seq2
408bp
 PREDICTED:_TELO2-interacting_protein_1_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0031931 C TORC1 complex
GO:0031932 C TORC2 complex
GO:0032006 P regulation of TOR signaling
772 O_BomoEE10696_complete:A_BomoEE_comp64441_c0_seq2
285bp
 PREDICTED:_TELO2-interacting_protein_1_homolog_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0031931 C TORC1 complex
GO:0031932 C TORC2 complex
GO:0032006 P regulation of TOR signaling
773 O_BomoEE10697_complete:A_BomoEE_comp64441_c0_seq2
138bp
774 O_BomoEE10698_complete:A_BomoEE_comp64441_c0_seq2
104bp
775 O_BomoEE10699_3prime_partial:A_BomoEE_comp64442_c1_seq2
107bp
776 O_BomoEE1069_5prime_partial:A_BomoEE_comp23912_c0_seq1
131bp
777 O_BomoEE106_3prime_partial:A_BomoEE_comp1970_c0_seq1
100bp
 hypothetical_protein_STCU_01646_[Strigomonas_culicis]
778 O_BomoEE10700_3prime_partial:A_BomoEE_comp64443_c0_seq3
148bp
 PREDICTED:_uncharacterized_protein_LOC106107543_[Papilio_polytes]
779 O_BomoEE10701_complete:A_BomoEE_comp64444_c0_seq1
337bp
 DNA_cytosine-5_methyltransferase_[Bombyx_mori]
GO:0001975 P response to amphetamine
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0008175 F tRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
780 O_BomoEE10702_complete:A_BomoEE_comp64444_c0_seq1
157bp
 PREDICTED:_protein_JTB-like_[Plutella_xylostella]
GO:0000910 P cytokinesis
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008637 P apoptotic mitochondrial changes
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019901 F protein kinase binding
GO:0030496 C midbody
GO:0042127 P regulation of cell population proliferation
GO:0045860 P positive regulation of protein kinase activity
GO:0051301 P cell division
previous next from show/95730

- SilkBase 1999-2023 -