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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6661 O_BomoEE15997_complete:A_BomoEE_comp68355_c1_seq4
103bp
6662 O_BomoEE15998_3prime_partial:A_BomoEE_comp68356_c0_seq1
118bp
 hypothetical_protein_OBRU01_12301_[Operophtera_brumata]
6663 O_BomoEE15999_complete:A_BomoEE_comp68356_c0_seq1
116bp
6664 O_BomoEE1599_complete:A_BomoEE_comp32231_c0_seq1
136bp
6665 O_BomoEE159_complete:A_BomoEE_comp2607_c0_seq2
106bp
6666 O_BomoEE15_5prime_partial:A_BomoEE_comp244_c1_seq1
106bp
6667 O_BomoEE16000_5prime_partial:A_BomoEE_comp68356_c0_seq1
100bp
6668 O_BomoEE16001_3prime_partial:A_BomoEE_comp68356_c0_seq2
118bp
 hypothetical_protein_OBRU01_12301_[Operophtera_brumata]
6669 O_BomoEE16002_5prime_partial:A_BomoEE_comp68356_c0_seq2
100bp
6670 O_BomoEE16003_complete:A_BomoEE_comp68356_c0_seq3
112bp
 hypothetical_protein_OBRU01_12301_[Operophtera_brumata]
6671 O_BomoEE16004_3prime_partial:A_BomoEE_comp68356_c0_seq4
118bp
 hypothetical_protein_OBRU01_12301_[Operophtera_brumata]
6672 O_BomoEE16005_5prime_partial:A_BomoEE_comp68356_c0_seq4
100bp
6673 O_BomoEE16006_complete:A_BomoEE_comp68356_c0_seq5
116bp
6674 O_BomoEE16007_complete:A_BomoEE_comp68356_c0_seq5
112bp
 hypothetical_protein_OBRU01_12301_[Operophtera_brumata]
6675 O_BomoEE16008_complete:A_BomoEE_comp68356_c0_seq6
112bp
 hypothetical_protein_OBRU01_12301_[Operophtera_brumata]
6676 O_BomoEE16009_complete:A_BomoEE_comp68359_c0_seq1
602bp
 putative_Ser/Thr-like_protein_kinase_lyk4_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
6677 O_BomoEE1600_complete:A_BomoEE_comp32231_c0_seq2
409bp
 putative_Short-chain_specific_acyl-CoA_dehydrogenase,_mitochondrial_precursor_[Danaus_plexippus]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0004085 F butyryl-CoA dehydrogenase activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0042594 P response to starvation
GO:0046359 P butyrate catabolic process
GO:0050660 F flavin adenine dinucleotide binding
GO:0051289 P protein homotetramerization
GO:0051384 P response to glucocorticoid
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
6678 O_BomoEE16010_3prime_partial:A_BomoEE_comp68363_c0_seq1
202bp
 PREDICTED:_uncharacterized_protein_LOC106107572_isoform_X3_[Papilio_polytes]
6679 O_BomoEE16011_5prime_partial:A_BomoEE_comp68363_c0_seq1
104bp
6680 O_BomoEE16012_3prime_partial:A_BomoEE_comp68363_c0_seq2
202bp
 PREDICTED:_uncharacterized_protein_LOC106107572_isoform_X3_[Papilio_polytes]
6681 O_BomoEE16013_5prime_partial:A_BomoEE_comp68363_c0_seq2
104bp
6682 O_BomoEE16014_3prime_partial:A_BomoEE_comp68363_c0_seq3
202bp
 PREDICTED:_uncharacterized_protein_LOC106107572_isoform_X3_[Papilio_polytes]
6683 O_BomoEE16015_5prime_partial:A_BomoEE_comp68363_c0_seq3
104bp
6684 O_BomoEE16016_3prime_partial:A_BomoEE_comp68363_c0_seq4
206bp
 PREDICTED:_uncharacterized_protein_LOC106107572_isoform_X1_[Papilio_polytes]
6685 O_BomoEE16017_5prime_partial:A_BomoEE_comp68363_c0_seq4
104bp
6686 O_BomoEE16018_complete:A_BomoEE_comp68367_c0_seq1
140bp
 PREDICTED:_heterogeneous_nuclear_ribonucleoprotein_F_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008134 F transcription factor binding
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0017025 F TBP-class protein binding
GO:0030529 C ribonucleoprotein complex
GO:0043484 P regulation of RNA splicing
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
6687 O_BomoEE16019_3prime_partial:A_BomoEE_comp68367_c0_seq2
212bp
 PREDICTED:_heterogeneous_nuclear_ribonucleoprotein_F_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008134 F transcription factor binding
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0017025 F TBP-class protein binding
GO:0030529 C ribonucleoprotein complex
GO:0043484 P regulation of RNA splicing
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
6688 O_BomoEE1601_complete:A_BomoEE_comp32231_c0_seq2
139bp
 conserved_hypothetical_protein_[Stigmatella_aurantiaca_DW4/3-1]
6689 O_BomoEE16020_5prime_partial:A_BomoEE_comp68367_c0_seq2
137bp
6690 O_BomoEE16021_complete:A_BomoEE_comp68367_c0_seq4
198bp
 PREDICTED:_heterogeneous_nuclear_ribonucleoprotein_F_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008134 F transcription factor binding
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0017025 F TBP-class protein binding
GO:0030529 C ribonucleoprotein complex
GO:0043484 P regulation of RNA splicing
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
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