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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6481 O_BomoEE15834_complete:A_BomoEE_comp68298_c0_seq2
143bp
6482 O_BomoEE15835_complete:A_BomoEE_comp68298_c0_seq2
136bp
 ATP-dependent_RNA_helicase_DDX54-like_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016070 P RNA metabolic process
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0030331 F estrogen receptor binding
GO:0030520 P intracellular estrogen receptor signaling pathway
GO:0044822 F RNA binding
GO:1903507 P negative regulation of nucleic acid-templated transcription
6483 O_BomoEE15836_complete:A_BomoEE_comp68298_c0_seq3
749bp
 ATP-dependent_RNA_helicase_DDX54_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016070 P RNA metabolic process
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0030331 F estrogen receptor binding
GO:0044822 F RNA binding
GO:1903507 P negative regulation of nucleic acid-templated transcription
6484 O_BomoEE15837_complete:A_BomoEE_comp68298_c0_seq3
143bp
6485 O_BomoEE15838_complete:A_BomoEE_comp68298_c0_seq3
131bp
 Os11g0599466_[Oryza_sativa_Japonica_Group]
6486 O_BomoEE15839_complete:A_BomoEE_comp68298_c0_seq4
520bp
 ATP-dependent_RNA_helicase_DDX54_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016070 P RNA metabolic process
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0030331 F estrogen receptor binding
GO:0044822 F RNA binding
GO:1903507 P negative regulation of nucleic acid-templated transcription
6487 O_BomoEE1583_complete:A_BomoEE_comp32211_c0_seq1
151bp
 Actin_binding_protein,_partial_[Operophtera_brumata]
GO:0004842 F ubiquitin-protein transferase activity
GO:0031463 C Cul3-RING ubiquitin ligase complex
GO:0042787 P ubiquitin-dependent protein catabolic process
6488 O_BomoEE15840_complete:A_BomoEE_comp68298_c0_seq4
143bp
6489 O_BomoEE15841_complete:A_BomoEE_comp68298_c0_seq4
136bp
 ATP-dependent_RNA_helicase_DDX54-like_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016070 P RNA metabolic process
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0030331 F estrogen receptor binding
GO:0030520 P intracellular estrogen receptor signaling pathway
GO:0044822 F RNA binding
GO:1903507 P negative regulation of nucleic acid-templated transcription
6490 O_BomoEE15842_5prime_partial:A_BomoEE_comp68299_c0_seq1
264bp
 hypothetical_protein_KGM_13986_[Danaus_plexippus]
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0006892 P post-Golgi vesicle-mediated transport
GO:0007015 P actin filament organization
GO:0008152 P metabolic process
GO:0010008 C endosome membrane
GO:0016459 C myosin complex
GO:0030048 P actin filament-based movement
GO:0030175 C filopodium
GO:0032588 C trans-Golgi network membrane
GO:0048471 C perinuclear region of cytoplasm
GO:0051015 F actin filament binding
GO:0051017 P actin filament bundle assembly
GO:0070062 C extracellular exosome
GO:0071944 C cell periphery
6491 O_BomoEE15843_5prime_partial:A_BomoEE_comp68299_c0_seq1
165bp
6492 O_BomoEE15844_5prime_partial:A_BomoEE_comp68299_c0_seq2
183bp
 hypothetical_protein_KGM_13986_[Danaus_plexippus]
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0006892 P post-Golgi vesicle-mediated transport
GO:0007015 P actin filament organization
GO:0008152 P metabolic process
GO:0010008 C endosome membrane
GO:0016459 C myosin complex
GO:0030048 P actin filament-based movement
GO:0030175 C filopodium
GO:0032588 C trans-Golgi network membrane
GO:0048471 C perinuclear region of cytoplasm
GO:0051015 F actin filament binding
GO:0051017 P actin filament bundle assembly
GO:0070062 C extracellular exosome
GO:0071944 C cell periphery
6493 O_BomoEE15845_5prime_partial:A_BomoEE_comp68299_c0_seq2
182bp
6494 O_BomoEE15846_3prime_partial:A_BomoEE_comp68299_c0_seq2
163bp
6495 O_BomoEE15847_3prime_partial:A_BomoEE_comp68300_c0_seq1
249bp
 PREDICTED:_4-hydroxybenzoate_polyprenyltransferase,_mitochondrial_[Papilio_xuthus]
GO:0002083 F 4-hydroxybenzoate decaprenyltransferase activity
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0004659 F prenyltransferase activity
GO:0005666 C RNA polymerase III complex
GO:0005736 C RNA polymerase I complex
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006360 P transcription by RNA polymerase I
GO:0006383 P transcription by RNA polymerase III
GO:0006744 P ubiquinone biosynthetic process
GO:0008299 P isoprenoid biosynthetic process
GO:0008412 F 4-hydroxybenzoate octaprenyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0047293 F 4-hydroxybenzoate nonaprenyltransferase activity
6496 O_BomoEE15848_internal:A_BomoEE_comp68300_c0_seq2
126bp
 PREDICTED:_4-hydroxybenzoate_polyprenyltransferase,_mitochondrial_[Papilio_xuthus]
GO:0002083 F 4-hydroxybenzoate decaprenyltransferase activity
GO:0004659 F prenyltransferase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006071 P glycerol metabolic process
GO:0006744 P ubiquinone biosynthetic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0047293 F 4-hydroxybenzoate nonaprenyltransferase activity
6497 O_BomoEE15849_5prime_partial:A_BomoEE_comp68300_c0_seq2
106bp
6498 O_BomoEE1584_complete:A_BomoEE_comp32211_c0_seq1
122bp
6499 O_BomoEE15850_3prime_partial:A_BomoEE_comp68300_c0_seq3
323bp
 PREDICTED:_4-hydroxybenzoate_polyprenyltransferase,_mitochondrial_[Papilio_xuthus]
GO:0002083 F 4-hydroxybenzoate decaprenyltransferase activity
GO:0004659 F prenyltransferase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006071 P glycerol metabolic process
GO:0006744 P ubiquinone biosynthetic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0047293 F 4-hydroxybenzoate nonaprenyltransferase activity
6500 O_BomoEE15851_5prime_partial:A_BomoEE_comp68300_c0_seq3
106bp
6501 O_BomoEE15852_3prime_partial:A_BomoEE_comp68301_c0_seq1
289bp
 PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045165 P cell fate commitment
GO:0045498 P sex comb development
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
6502 O_BomoEE15853_5prime_partial:A_BomoEE_comp68301_c0_seq1
116bp
6503 O_BomoEE15854_5prime_partial:A_BomoEE_comp68301_c0_seq1
100bp
6504 O_BomoEE15855_complete:A_BomoEE_comp68301_c0_seq2
212bp
 PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045165 P cell fate commitment
GO:0045498 P sex comb development
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
6505 O_BomoEE15856_complete:A_BomoEE_comp68301_c1_seq1
188bp
 PREDICTED:_39S_ribosomal_protein_L50,_mitochondrial_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0005840 C ribosome
GO:0008150 P biological_process
GO:0030529 C ribonucleoprotein complex
6506 O_BomoEE15857_5prime_partial:A_BomoEE_comp68303_c1_seq1
881bp
 PREDICTED:_uncharacterized_protein_LOC101744657_[Bombyx_mori]
6507 O_BomoEE15858_5prime_partial:A_BomoEE_comp68303_c1_seq1
881bp
 PREDICTED:_uncharacterized_protein_LOC101744657_[Bombyx_mori]
6508 O_BomoEE15859_3prime_partial:A_BomoEE_comp68303_c1_seq1
194bp
6509 O_BomoEE1585_complete:A_BomoEE_comp32211_c0_seq1
110bp
6510 O_BomoEE15860_3prime_partial:A_BomoEE_comp68303_c1_seq1
194bp
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