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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6451 O_BomoEE15807_complete:A_BomoEE_comp68282_c0_seq2
441bp
 PREDICTED:_proton-coupled_amino_acid_transporter_1_isoform_X1_[Bombyx_mori]
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015180 F L-alanine transmembrane transporter activity
GO:0015193 F L-proline transmembrane transporter activity
GO:0015196 F L-tryptophan transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015808 P L-alanine transport
GO:0015824 P proline transport
GO:0015827 P tryptophan transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035524 P proline transmembrane transport
GO:0055085 P transmembrane transport
6452 O_BomoEE15808_complete:A_BomoEE_comp68282_c0_seq2
110bp
6453 O_BomoEE15809_complete:A_BomoEE_comp68282_c0_seq3
441bp
 PREDICTED:_proton-coupled_amino_acid_transporter_1_isoform_X1_[Bombyx_mori]
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015180 F L-alanine transmembrane transporter activity
GO:0015193 F L-proline transmembrane transporter activity
GO:0015196 F L-tryptophan transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015808 P L-alanine transport
GO:0015824 P proline transport
GO:0015827 P tryptophan transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035524 P proline transmembrane transport
GO:0055085 P transmembrane transport
6454 O_BomoEE1580_complete:A_BomoEE_comp32208_c0_seq1
109bp
6455 O_BomoEE15810_complete:A_BomoEE_comp68282_c0_seq5
441bp
 PREDICTED:_proton-coupled_amino_acid_transporter_1_isoform_X1_[Bombyx_mori]
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015180 F L-alanine transmembrane transporter activity
GO:0015193 F L-proline transmembrane transporter activity
GO:0015196 F L-tryptophan transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015808 P L-alanine transport
GO:0015824 P proline transport
GO:0015827 P tryptophan transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035524 P proline transmembrane transport
GO:0055085 P transmembrane transport
6456 O_BomoEE15811_complete:A_BomoEE_comp68282_c0_seq5
110bp
6457 O_BomoEE15812_complete:A_BomoEE_comp68282_c0_seq6
510bp
 PREDICTED:_proton-coupled_amino_acid_transporter_1_isoform_X1_[Bombyx_mori]
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015180 F L-alanine transmembrane transporter activity
GO:0015193 F L-proline transmembrane transporter activity
GO:0015196 F L-tryptophan transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015808 P L-alanine transport
GO:0015824 P proline transport
GO:0015827 P tryptophan transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035524 P proline transmembrane transport
GO:0055085 P transmembrane transport
6458 O_BomoEE15813_complete:A_BomoEE_comp68282_c0_seq9
484bp
 PREDICTED:_proton-coupled_amino_acid_transporter_1_isoform_X1_[Bombyx_mori]
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015180 F L-alanine transmembrane transporter activity
GO:0015193 F L-proline transmembrane transporter activity
GO:0015196 F L-tryptophan transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015808 P L-alanine transport
GO:0015824 P proline transport
GO:0015827 P tryptophan transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035524 P proline transmembrane transport
GO:0055085 P transmembrane transport
6459 O_BomoEE15814_complete:A_BomoEE_comp68284_c0_seq1
556bp
 PREDICTED:_zinc_finger_FYVE_domain-containing_protein_26_homolog_isoform_X1_[Bombyx_mori]
GO:0046872 F metal ion binding
6460 O_BomoEE15815_complete:A_BomoEE_comp68284_c0_seq1
128bp
6461 O_BomoEE15816_3prime_partial:A_BomoEE_comp68284_c0_seq1
126bp
6462 O_BomoEE15817_complete:A_BomoEE_comp68284_c0_seq1
108bp
 signal_recognition_particle_14_kDa_protein-like_protein_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005786 C signal recognition particle, endoplasmic reticulum targeting
GO:0006614 P SRP-dependent cotranslational protein targeting to membrane
GO:0008312 F 7S RNA binding
GO:0030529 C ribonucleoprotein complex
GO:0030942 F endoplasmic reticulum signal peptide binding
GO:0042493 P response to xenobiotic stimulus
GO:0044822 F RNA binding
GO:0045047 P protein targeting to ER
GO:0048500 C signal recognition particle
GO:0070062 C extracellular exosome
6463 O_BomoEE15818_complete:A_BomoEE_comp68284_c0_seq2
108bp
 signal_recognition_particle_14_kDa_protein-like_protein_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005786 C signal recognition particle, endoplasmic reticulum targeting
GO:0006614 P SRP-dependent cotranslational protein targeting to membrane
GO:0008312 F 7S RNA binding
GO:0030529 C ribonucleoprotein complex
GO:0030942 F endoplasmic reticulum signal peptide binding
GO:0042493 P response to xenobiotic stimulus
GO:0044822 F RNA binding
GO:0045047 P protein targeting to ER
GO:0048500 C signal recognition particle
GO:0070062 C extracellular exosome
6464 O_BomoEE15819_5prime_partial:A_BomoEE_comp68284_c0_seq3
621bp
 PREDICTED:_zinc_finger_FYVE_domain-containing_protein_26_homolog_isoform_X1_[Bombyx_mori]
GO:0046872 F metal ion binding
6465 O_BomoEE1581_complete:A_BomoEE_comp32209_c0_seq1
138bp
 hypothetical_protein_KGM_04498_[Danaus_plexippus]
GO:0000176 C nuclear exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0000460 P maturation of 5.8S rRNA
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
6466 O_BomoEE15820_complete:A_BomoEE_comp68284_c0_seq3
108bp
 signal_recognition_particle_14_kDa_protein-like_protein_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005786 C signal recognition particle, endoplasmic reticulum targeting
GO:0006614 P SRP-dependent cotranslational protein targeting to membrane
GO:0008312 F 7S RNA binding
GO:0030529 C ribonucleoprotein complex
GO:0030942 F endoplasmic reticulum signal peptide binding
GO:0042493 P response to xenobiotic stimulus
GO:0044822 F RNA binding
GO:0045047 P protein targeting to ER
GO:0048500 C signal recognition particle
GO:0070062 C extracellular exosome
6467 O_BomoEE15821_complete:A_BomoEE_comp68284_c0_seq5
511bp
 PREDICTED:_zinc_finger_FYVE_domain-containing_protein_26_homolog_isoform_X1_[Bombyx_mori]
GO:0046872 F metal ion binding
6468 O_BomoEE15822_3prime_partial:A_BomoEE_comp68284_c0_seq5
126bp
6469 O_BomoEE15823_complete:A_BomoEE_comp68284_c0_seq5
108bp
 signal_recognition_particle_14_kDa_protein-like_protein_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005786 C signal recognition particle, endoplasmic reticulum targeting
GO:0006614 P SRP-dependent cotranslational protein targeting to membrane
GO:0008312 F 7S RNA binding
GO:0030529 C ribonucleoprotein complex
GO:0030942 F endoplasmic reticulum signal peptide binding
GO:0042493 P response to xenobiotic stimulus
GO:0044822 F RNA binding
GO:0045047 P protein targeting to ER
GO:0048500 C signal recognition particle
GO:0070062 C extracellular exosome
6470 O_BomoEE15824_5prime_partial:A_BomoEE_comp68284_c0_seq6
666bp
 PREDICTED:_zinc_finger_FYVE_domain-containing_protein_26_homolog_isoform_X1_[Bombyx_mori]
GO:0046872 F metal ion binding
6471 O_BomoEE15825_complete:A_BomoEE_comp68284_c0_seq6
128bp
6472 O_BomoEE15826_complete:A_BomoEE_comp68284_c0_seq6
108bp
 signal_recognition_particle_14_kDa_protein-like_protein_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005786 C signal recognition particle, endoplasmic reticulum targeting
GO:0006614 P SRP-dependent cotranslational protein targeting to membrane
GO:0008312 F 7S RNA binding
GO:0030529 C ribonucleoprotein complex
GO:0030942 F endoplasmic reticulum signal peptide binding
GO:0042493 P response to xenobiotic stimulus
GO:0044822 F RNA binding
GO:0045047 P protein targeting to ER
GO:0048500 C signal recognition particle
GO:0070062 C extracellular exosome
6473 O_BomoEE15827_complete:A_BomoEE_comp68287_c1_seq1
259bp
 flavin-dependent_monooxygenase_FMO1_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0004499 F N,N-dimethylaniline monooxygenase activity
GO:0005576 C extracellular region
GO:0009820 P alkaloid metabolic process
GO:0016491 F oxidoreductase activity
GO:0033784 F senecionine N-oxygenase activity
GO:0050660 F flavin adenine dinucleotide binding
GO:0050661 F NADP binding
GO:0051289 P protein homotetramerization
GO:0055114 P obsolete oxidation-reduction process
6474 O_BomoEE15828_complete:A_BomoEE_comp68287_c1_seq2
460bp
 flavin-dependent_monooxygenase_FMO1_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0004499 F N,N-dimethylaniline monooxygenase activity
GO:0005576 C extracellular region
GO:0009820 P alkaloid metabolic process
GO:0016491 F oxidoreductase activity
GO:0033784 F senecionine N-oxygenase activity
GO:0050660 F flavin adenine dinucleotide binding
GO:0050661 F NADP binding
GO:0051289 P protein homotetramerization
GO:0055114 P obsolete oxidation-reduction process
6475 O_BomoEE15829_complete:A_BomoEE_comp68298_c0_seq1
520bp
 ATP-dependent_RNA_helicase_DDX54_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016070 P RNA metabolic process
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0030331 F estrogen receptor binding
GO:0044822 F RNA binding
GO:1903507 P negative regulation of nucleic acid-templated transcription
6476 O_BomoEE1582_complete:A_BomoEE_comp32211_c0_seq1
410bp
 PREDICTED:_kelch-like_ECH-associated_protein_1_isoform_X2_[Papilio_xuthus]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0010499 P proteasomal ubiquitin-independent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0031463 C Cul3-RING ubiquitin ligase complex
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0042994 P cytoplasmic sequestering of transcription factor
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043433 P negative regulation of DNA-binding transcription factor activity
6477 O_BomoEE15830_complete:A_BomoEE_comp68298_c0_seq1
192bp
 ATP-dependent_RNA_helicase_DDX54-like_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016070 P RNA metabolic process
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0030331 F estrogen receptor binding
GO:0030520 P intracellular estrogen receptor signaling pathway
GO:0044822 F RNA binding
GO:1903507 P negative regulation of nucleic acid-templated transcription
6478 O_BomoEE15831_complete:A_BomoEE_comp68298_c0_seq1
143bp
6479 O_BomoEE15832_complete:A_BomoEE_comp68298_c0_seq1
131bp
 Os11g0599466_[Oryza_sativa_Japonica_Group]
6480 O_BomoEE15833_complete:A_BomoEE_comp68298_c0_seq2
626bp
 ATP-dependent_RNA_helicase_DDX54_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016070 P RNA metabolic process
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0030331 F estrogen receptor binding
GO:0044822 F RNA binding
GO:1903507 P negative regulation of nucleic acid-templated transcription
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