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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6271 O_BomoEE15645_3prime_partial:A_BomoEE_comp68204_c0_seq9
1182bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Amyelois_transitella]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
6272 O_BomoEE15646_complete:A_BomoEE_comp68204_c0_seq9
320bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
6273 O_BomoEE15647_3prime_partial:A_BomoEE_comp68204_c0_seq10
1003bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Amyelois_transitella]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
6274 O_BomoEE15648_complete:A_BomoEE_comp68204_c0_seq10
193bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
6275 O_BomoEE15649_complete:A_BomoEE_comp68204_c0_seq11
193bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
6276 O_BomoEE1564_5prime_partial:A_BomoEE_comp32172_c0_seq1
430bp
 PREDICTED:_uncharacterized_protein_LOC101738839_isoform_X1_[Bombyx_mori]
6277 O_BomoEE15650_complete:A_BomoEE_comp68204_c0_seq11
121bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007162 P negative regulation of cell adhesion
GO:0007399 P nervous system development
GO:0007416 P synapse assembly
GO:0007626 P locomotory behavior
GO:0010842 P retina layer formation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030424 C axon
GO:0030426 C growth cone
GO:0042327 P positive regulation of phosphorylation
GO:0042995 C cell projection
GO:0045202 C synapse
GO:0048813 P dendrite morphogenesis
GO:0048842 P positive regulation of axon extension involved in axon guidance
GO:0060060 P post-embryonic retina morphogenesis in camera-type eye
GO:0060219 P camera-type eye photoreceptor cell differentiation
GO:0070593 P dendrite self-avoidance
6278 O_BomoEE15651_3prime_partial:A_BomoEE_comp68204_c0_seq12
1003bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Amyelois_transitella]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
6279 O_BomoEE15652_complete:A_BomoEE_comp68204_c0_seq12
193bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
6280 O_BomoEE15653_complete:A_BomoEE_comp68205_c0_seq1
109bp
 PREDICTED:_uncharacterized_protein_LOC101738362_[Bombyx_mori]
6281 O_BomoEE15654_5prime_partial:A_BomoEE_comp68205_c0_seq2
106bp
6282 O_BomoEE15655_complete:A_BomoEE_comp68206_c0_seq1
202bp
6283 O_BomoEE15656_complete:A_BomoEE_comp68206_c0_seq1
173bp
6284 O_BomoEE15657_complete:A_BomoEE_comp68206_c0_seq1
124bp
6285 O_BomoEE15658_complete:A_BomoEE_comp68206_c0_seq1
116bp
6286 O_BomoEE15659_internal:A_BomoEE_comp68207_c0_seq1
112bp
6287 O_BomoEE1565_complete:A_BomoEE_comp32179_c0_seq1
197bp
 PREDICTED:_5-formyltetrahydrofolate_cyclo-ligase-like_isoform_X2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005542 F folic acid binding
GO:0005737 C cytoplasm
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006536 P glutamate metabolic process
GO:0009396 P folic acid-containing compound biosynthetic process
GO:0015942 P formate metabolic process
GO:0016874 F ligase activity
GO:0030272 F 5-formyltetrahydrofolate cyclo-ligase activity
GO:0035999 P tetrahydrofolate interconversion
GO:0046653 P tetrahydrofolate metabolic process
GO:0046655 P folic acid metabolic process
GO:0046657 P folic acid catabolic process
GO:0046872 F metal ion binding
6288 O_BomoEE15660_complete:A_BomoEE_comp68212_c0_seq1
246bp
 PREDICTED:_dynein_intermediate_chain_2,_ciliary_[Bombyx_mori]
GO:0003774 F cytoskeletal motor activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0008152 P metabolic process
GO:0030286 C dynein complex
GO:0042995 C cell projection
6289 O_BomoEE15661_complete:A_BomoEE_comp68212_c0_seq2
513bp
 PREDICTED:_dynein_intermediate_chain_2,_ciliary_[Bombyx_mori]
GO:0003774 F cytoskeletal motor activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0008152 P metabolic process
GO:0030286 C dynein complex
GO:0042995 C cell projection
6290 O_BomoEE15662_5prime_partial:A_BomoEE_comp68212_c0_seq3
143bp
 PREDICTED:_dynein_intermediate_chain_2,_ciliary_[Bombyx_mori]
GO:0003774 F cytoskeletal motor activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0008152 P metabolic process
GO:0030286 C dynein complex
GO:0042995 C cell projection
6291 O_BomoEE15663_complete:A_BomoEE_comp68212_c0_seq4
503bp
 PREDICTED:_dynein_intermediate_chain_2,_ciliary_[Bombyx_mori]
GO:0003774 F cytoskeletal motor activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0008152 P metabolic process
GO:0030286 C dynein complex
GO:0042995 C cell projection
6292 O_BomoEE15664_5prime_partial:A_BomoEE_comp68212_c0_seq5
153bp
 PREDICTED:_dynein_intermediate_chain_2,_ciliary_[Bombyx_mori]
GO:0003774 F cytoskeletal motor activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0008152 P metabolic process
GO:0030286 C dynein complex
GO:0042995 C cell projection
6293 O_BomoEE15665_complete:A_BomoEE_comp68212_c0_seq6
236bp
 PREDICTED:_dynein_intermediate_chain_2,_ciliary_[Bombyx_mori]
GO:0003774 F cytoskeletal motor activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0008152 P metabolic process
GO:0030286 C dynein complex
GO:0042995 C cell projection
6294 O_BomoEE15666_5prime_partial:A_BomoEE_comp68217_c0_seq1
476bp
 PREDICTED:_SET_and_MYND_domain-containing_protein_4_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0046872 F metal ion binding
6295 O_BomoEE15667_internal:A_BomoEE_comp68217_c1_seq1
289bp
 PREDICTED:_SET_and_MYND_domain-containing_protein_4_isoform_X2_[Bombyx_mori]
6296 O_BomoEE15668_3prime_partial:A_BomoEE_comp68218_c0_seq1
503bp
 PREDICTED:_uncharacterized_protein_LOC105391048_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6297 O_BomoEE15669_complete:A_BomoEE_comp68219_c0_seq1
623bp
 PREDICTED:_uncharacterized_protein_LOC106131008_[Amyelois_transitella]
6298 O_BomoEE1566_complete:A_BomoEE_comp32179_c0_seq2
197bp
 PREDICTED:_5-formyltetrahydrofolate_cyclo-ligase-like_isoform_X2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005542 F folic acid binding
GO:0005737 C cytoplasm
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006536 P glutamate metabolic process
GO:0009396 P folic acid-containing compound biosynthetic process
GO:0015942 P formate metabolic process
GO:0016874 F ligase activity
GO:0030272 F 5-formyltetrahydrofolate cyclo-ligase activity
GO:0035999 P tetrahydrofolate interconversion
GO:0046653 P tetrahydrofolate metabolic process
GO:0046655 P folic acid metabolic process
GO:0046657 P folic acid catabolic process
GO:0046872 F metal ion binding
6299 O_BomoEE15670_complete:A_BomoEE_comp68219_c0_seq1
209bp
 putative_RNA-directed_DNA_polymerase_from_transposon_BS_[Papilio_xuthus]
6300 O_BomoEE15671_complete:A_BomoEE_comp68219_c0_seq1
177bp
 PREDICTED:_NADH_dehydrogenase_[ubiquinone]_1_alpha_subcomplex_subunit_8-like_[Plutella_xylostella]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005758 C mitochondrial intermembrane space
GO:0016020 C membrane
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
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