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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/95730
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6241 O_BomoEE15618_3prime_partial:A_BomoEE_comp68203_c1_seq1
146bp
 PREDICTED:_trafficking_protein_particle_complex_subunit_8_[Bombyx_mori]
6242 O_BomoEE15619_5prime_partial:A_BomoEE_comp68203_c1_seq1
138bp
6243 O_BomoEE1561_internal:A_BomoEE_comp32167_c0_seq1
158bp
 PREDICTED:_uncharacterized_protein_LOC105392325,_partial_[Plutella_xylostella]
6244 O_BomoEE15620_internal:A_BomoEE_comp68203_c1_seq2
291bp
 PREDICTED:_trafficking_protein_particle_complex_subunit_8_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0005515 F protein binding
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0016192 P vesicle-mediated transport
GO:0030242 P autophagy of peroxisome
GO:0031410 C cytoplasmic vesicle
GO:0032258 P cytoplasm to vacuole transport by the Cvt pathway
GO:0034497 P protein localization to phagophore assembly site
GO:0044804 P autophagy of nucleus
GO:1990072 C TRAPPIII protein complex
6245 O_BomoEE15621_5prime_partial:A_BomoEE_comp68203_c1_seq2
138bp
6246 O_BomoEE15622_complete:A_BomoEE_comp68204_c0_seq1
193bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
6247 O_BomoEE15623_complete:A_BomoEE_comp68204_c0_seq1
121bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007162 P negative regulation of cell adhesion
GO:0007399 P nervous system development
GO:0007416 P synapse assembly
GO:0007626 P locomotory behavior
GO:0010842 P retina layer formation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030424 C axon
GO:0030426 C growth cone
GO:0042327 P positive regulation of phosphorylation
GO:0042995 C cell projection
GO:0045202 C synapse
GO:0048813 P dendrite morphogenesis
GO:0048842 P positive regulation of axon extension involved in axon guidance
GO:0060060 P post-embryonic retina morphogenesis in camera-type eye
GO:0060219 P camera-type eye photoreceptor cell differentiation
GO:0070593 P dendrite self-avoidance
6248 O_BomoEE15624_3prime_partial:A_BomoEE_comp68204_c0_seq2
562bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Amyelois_transitella]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
6249 O_BomoEE15625_complete:A_BomoEE_comp68204_c0_seq2
354bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
6250 O_BomoEE15626_complete:A_BomoEE_comp68204_c0_seq2
193bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
6251 O_BomoEE15627_3prime_partial:A_BomoEE_comp68204_c0_seq3
562bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Amyelois_transitella]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
6252 O_BomoEE15628_complete:A_BomoEE_comp68204_c0_seq3
354bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
6253 O_BomoEE15629_complete:A_BomoEE_comp68204_c0_seq3
320bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
6254 O_BomoEE1562_internal:A_BomoEE_comp32167_c0_seq1
158bp
6255 O_BomoEE15630_complete:A_BomoEE_comp68204_c0_seq3
180bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
6256 O_BomoEE15631_complete:A_BomoEE_comp68204_c0_seq4
320bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
6257 O_BomoEE15632_complete:A_BomoEE_comp68204_c0_seq4
180bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
6258 O_BomoEE15633_complete:A_BomoEE_comp68204_c0_seq4
121bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007162 P negative regulation of cell adhesion
GO:0007399 P nervous system development
GO:0007416 P synapse assembly
GO:0007626 P locomotory behavior
GO:0010842 P retina layer formation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030424 C axon
GO:0030426 C growth cone
GO:0042327 P positive regulation of phosphorylation
GO:0042995 C cell projection
GO:0045202 C synapse
GO:0048813 P dendrite morphogenesis
GO:0048842 P positive regulation of axon extension involved in axon guidance
GO:0060060 P post-embryonic retina morphogenesis in camera-type eye
GO:0060219 P camera-type eye photoreceptor cell differentiation
GO:0070593 P dendrite self-avoidance
6259 O_BomoEE15634_3prime_partial:A_BomoEE_comp68204_c0_seq5
562bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Amyelois_transitella]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
6260 O_BomoEE15635_complete:A_BomoEE_comp68204_c0_seq5
354bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
6261 O_BomoEE15636_complete:A_BomoEE_comp68204_c0_seq5
193bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
6262 O_BomoEE15637_3prime_partial:A_BomoEE_comp68204_c0_seq6
1003bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Amyelois_transitella]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
6263 O_BomoEE15638_complete:A_BomoEE_comp68204_c0_seq6
320bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
6264 O_BomoEE15639_complete:A_BomoEE_comp68204_c0_seq6
180bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
6265 O_BomoEE1563_complete:A_BomoEE_comp32170_c0_seq1
433bp
 PREDICTED:_rho_GTPase-activating_protein_20_isoform_X3_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005829 C cytosol
GO:0007165 P signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
6266 O_BomoEE15640_3prime_partial:A_BomoEE_comp68204_c0_seq7
562bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Amyelois_transitella]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
6267 O_BomoEE15641_complete:A_BomoEE_comp68204_c0_seq7
533bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
6268 O_BomoEE15642_complete:A_BomoEE_comp68204_c0_seq7
320bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
6269 O_BomoEE15643_complete:A_BomoEE_comp68204_c0_seq8
320bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
6270 O_BomoEE15644_complete:A_BomoEE_comp68204_c0_seq8
300bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
previous next from show/95730

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