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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6031 O_BomoEE15429_complete:A_BomoEE_comp68074_c0_seq6
624bp
 PREDICTED:_acyl-CoA_synthetase_family_member_3,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
6032 O_BomoEE1542_complete:A_BomoEE_comp32119_c0_seq1
122bp
6033 O_BomoEE15430_complete:A_BomoEE_comp68074_c0_seq6
100bp
6034 O_BomoEE15431_3prime_partial:A_BomoEE_comp68074_c0_seq7
496bp
 PREDICTED:_acyl-CoA_synthetase_family_member_3,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
6035 O_BomoEE15432_complete:A_BomoEE_comp68074_c0_seq7
100bp
6036 O_BomoEE15433_3prime_partial:A_BomoEE_comp68077_c0_seq2
113bp
 PREDICTED:_sodium_channel_protein_Nach-like_[Bombyx_mori]
GO:0005272 F sodium channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0009651 P response to salt stress
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035002 P liquid clearance, open tracheal system
GO:0035199 P salt aversion
GO:0035725 P sodium ion transmembrane transport
GO:0050914 P sensory perception of salty taste
GO:0060025 P regulation of synaptic activity
6037 O_BomoEE15434_3prime_partial:A_BomoEE_comp68077_c0_seq3
164bp
 PREDICTED:_sodium_channel_protein_Nach-like_[Bombyx_mori]
GO:0005272 F sodium channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0009651 P response to salt stress
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035002 P liquid clearance, open tracheal system
GO:0035199 P salt aversion
GO:0035725 P sodium ion transmembrane transport
GO:0050914 P sensory perception of salty taste
GO:0060025 P regulation of synaptic activity
6038 O_BomoEE15435_internal:A_BomoEE_comp68077_c0_seq4
276bp
 PREDICTED:_sodium_channel_protein_Nach-like_[Bombyx_mori]
GO:0005272 F sodium channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0009651 P response to salt stress
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035002 P liquid clearance, open tracheal system
GO:0035199 P salt aversion
GO:0035725 P sodium ion transmembrane transport
GO:0050914 P sensory perception of salty taste
GO:0060025 P regulation of synaptic activity
6039 O_BomoEE15436_complete:A_BomoEE_comp68078_c0_seq1
106bp
 aldo-keto_reductase_AKR2E4_[Bombyx_mori]
GO:0006629 P lipid metabolic process
GO:0008202 P steroid metabolic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
6040 O_BomoEE15437_5prime_partial:A_BomoEE_comp68078_c0_seq2
330bp
 aldo-keto_reductase_AKR2E4_[Bombyx_mori]
GO:0006629 P lipid metabolic process
GO:0008202 P steroid metabolic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
6041 O_BomoEE15438_internal:A_BomoEE_comp68079_c0_seq1
249bp
 Spectrin_beta_chain,_brain_1_[Papilio_machaon]
6042 O_BomoEE15439_3prime_partial:A_BomoEE_comp68079_c0_seq2
135bp
 PREDICTED:_uncharacterized_protein_LOC106100890_isoform_X2_[Papilio_polytes]
6043 O_BomoEE1543_complete:A_BomoEE_comp32124_c0_seq1
167bp
 PREDICTED:_7,8-dihydro-8-oxoguanine_triphosphatase-like_[Papilio_polytes]
GO:0001669 C acrosomal vesicle
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006195 P purine nucleotide catabolic process
GO:0006203 P dGTP catabolic process
GO:0006281 P DNA repair
GO:0008413 F 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030515 F snoRNA binding
GO:0031410 C cytoplasmic vesicle
GO:0031965 C nuclear membrane
GO:0035539 F 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity
GO:0036219 F GTP diphosphatase activity
GO:0042262 P DNA protection
GO:0046061 P dATP catabolic process
GO:0046872 F metal ion binding
GO:0047693 F ATP diphosphatase activity
GO:0050072 F m7G(5')pppN diphosphatase activity
GO:0070062 C extracellular exosome
6044 O_BomoEE15440_complete:A_BomoEE_comp68079_c0_seq3
145bp
 Spectrin_beta_chain,_brain_1_[Papilio_machaon]
6045 O_BomoEE15441_internal:A_BomoEE_comp68079_c0_seq4
259bp
 Spectrin_beta_chain_[Papilio_xuthus]
6046 O_BomoEE15442_5prime_partial:A_BomoEE_comp68079_c0_seq5
259bp
 Spectrin_beta_chain_[Papilio_xuthus]
6047 O_BomoEE15443_3prime_partial:A_BomoEE_comp68079_c0_seq6
145bp
 PREDICTED:_uncharacterized_protein_LOC106100890_isoform_X2_[Papilio_polytes]
6048 O_BomoEE15444_complete:A_BomoEE_comp68080_c0_seq1
1295bp
 PREDICTED:_filamin-A_isoform_X1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0008092 F cytoskeletal protein binding
GO:0016020 C membrane
GO:0016528 C sarcoplasm
GO:0030018 C Z disc
GO:0030506 F ankyrin binding
GO:0034329 P cell junction assembly
GO:0042383 C sarcolemma
GO:0043034 C costamere
GO:0048747 P muscle cell development
GO:0051015 F actin filament binding
6049 O_BomoEE15445_complete:A_BomoEE_comp68080_c0_seq1
411bp
 PREDICTED:_filamin-A_isoform_X1_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001664 F G protein-coupled receptor binding
GO:0001837 P epithelial to mesenchymal transition
GO:0001948 F protein binding
GO:0001974 P blood vessel remodeling
GO:0003007 P heart morphogenesis
GO:0003779 F actin binding
GO:0004871 F obsolete signal transducer activity
GO:0005080 F protein kinase C binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0005925 C focal adhesion
GO:0005938 C cell cortex
GO:0007195 P adenylate cyclase-inhibiting dopamine receptor signaling pathway
GO:0008134 F transcription factor binding
GO:0010977 P negative regulation of neuron projection development
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0016479 P negative regulation of transcription by RNA polymerase I
GO:0017048 F small GTPase binding
GO:0017160 F small GTPase binding
GO:0019900 F kinase binding
GO:0030030 P cell projection organization
GO:0030036 P actin cytoskeleton organization
GO:0030426 C growth cone
GO:0031267 F small GTPase binding
GO:0031523 C Myb complex
GO:0031532 P actin cytoskeleton reorganization
GO:0031941 C filamentous actin
GO:0032231 P regulation of actin filament bundle assembly
GO:0032432 C actin filament bundle
GO:0034394 P protein localization to cell surface
GO:0034988 F Fc-gamma receptor I complex binding
GO:0042177 P negative regulation of protein catabolic process
GO:0042384 P cilium assembly
GO:0042803 F protein homodimerization activity
GO:0042993 P obsolete positive regulation of transcription factor import into nucleus
GO:0043066 P negative regulation of apoptotic process
GO:0043113 P receptor clustering
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0044822 F RNA binding
GO:0045022 P early endosome to late endosome transport
GO:0045184 P establishment of protein localization
GO:0045216 P cell-cell junction organization
GO:0048365 F small GTPase binding
GO:0050821 P protein stabilization
GO:0051015 F actin filament binding
GO:0051220 P cytoplasmic sequestering of protein
GO:0051764 P actin crosslink formation
GO:0070062 C extracellular exosome
GO:0070527 P platelet aggregation
GO:0071526 P semaphorin-plexin signaling pathway
GO:0090307 P mitotic spindle assembly
GO:1900026 P positive regulation of substrate adhesion-dependent cell spreading
GO:2001046 P positive regulation of integrin-mediated signaling pathway
6050 O_BomoEE15446_complete:A_BomoEE_comp68080_c0_seq1
182bp
6051 O_BomoEE15447_complete:A_BomoEE_comp68080_c0_seq1
130bp
6052 O_BomoEE15448_complete:A_BomoEE_comp68080_c0_seq2
1778bp
 PREDICTED:_filamin-A_isoform_X1_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001664 F G protein-coupled receptor binding
GO:0001837 P epithelial to mesenchymal transition
GO:0001948 F protein binding
GO:0001974 P blood vessel remodeling
GO:0003007 P heart morphogenesis
GO:0003779 F actin binding
GO:0004871 F obsolete signal transducer activity
GO:0005080 F protein kinase C binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0005925 C focal adhesion
GO:0005938 C cell cortex
GO:0007195 P adenylate cyclase-inhibiting dopamine receptor signaling pathway
GO:0008134 F transcription factor binding
GO:0010977 P negative regulation of neuron projection development
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0016479 P negative regulation of transcription by RNA polymerase I
GO:0017048 F small GTPase binding
GO:0017160 F small GTPase binding
GO:0019900 F kinase binding
GO:0030030 P cell projection organization
GO:0030036 P actin cytoskeleton organization
GO:0030426 C growth cone
GO:0031267 F small GTPase binding
GO:0031523 C Myb complex
GO:0031532 P actin cytoskeleton reorganization
GO:0031941 C filamentous actin
GO:0032231 P regulation of actin filament bundle assembly
GO:0032432 C actin filament bundle
GO:0034394 P protein localization to cell surface
GO:0034988 F Fc-gamma receptor I complex binding
GO:0042177 P negative regulation of protein catabolic process
GO:0042384 P cilium assembly
GO:0042803 F protein homodimerization activity
GO:0042993 P obsolete positive regulation of transcription factor import into nucleus
GO:0043066 P negative regulation of apoptotic process
GO:0043113 P receptor clustering
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0044822 F RNA binding
GO:0045022 P early endosome to late endosome transport
GO:0045184 P establishment of protein localization
GO:0045216 P cell-cell junction organization
GO:0048365 F small GTPase binding
GO:0050821 P protein stabilization
GO:0051015 F actin filament binding
GO:0051220 P cytoplasmic sequestering of protein
GO:0051764 P actin crosslink formation
GO:0070062 C extracellular exosome
GO:0070527 P platelet aggregation
GO:0071526 P semaphorin-plexin signaling pathway
GO:0090307 P mitotic spindle assembly
GO:1900026 P positive regulation of substrate adhesion-dependent cell spreading
GO:2001046 P positive regulation of integrin-mediated signaling pathway
6053 O_BomoEE15449_complete:A_BomoEE_comp68080_c0_seq2
182bp
6054 O_BomoEE1544_complete:A_BomoEE_comp32124_c0_seq1
131bp
 hypothetical_protein_BRAFLDRAFT_84743_[Branchiostoma_floridae]
6055 O_BomoEE15450_complete:A_BomoEE_comp68080_c0_seq2
172bp
6056 O_BomoEE15451_complete:A_BomoEE_comp68080_c0_seq2
130bp
6057 O_BomoEE15452_complete:A_BomoEE_comp68081_c0_seq1
128bp
6058 O_BomoEE15453_complete:A_BomoEE_comp68085_c0_seq1
935bp
 PREDICTED:_MPN_domain-containing_protein_CG4751_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006508 P proteolysis
GO:0008150 P biological_process
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
6059 O_BomoEE15454_complete:A_BomoEE_comp68090_c2_seq1
528bp
 putative_U3_small_nucleolar_RNA-associated_protein_[Danaus_plexippus]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0030054 C cell junction
GO:0044822 F RNA binding
6060 O_BomoEE15455_complete:A_BomoEE_comp68090_c2_seq1
397bp
 PREDICTED:_mitochondrial_inner_membrane_protein_OXA1L_[Papilio_machaon]
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005746 C mitochondrial respirasome
GO:0006461 P protein-containing complex assembly
GO:0009060 P aerobic respiration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031966 C mitochondrial membrane
GO:0032592 C integral component of mitochondrial membrane
GO:0032780 P negative regulation of ATP-dependent activity
GO:0032981 P mitochondrial respiratory chain complex I assembly
GO:0033615 P mitochondrial proton-transporting ATP synthase complex assembly
GO:0042803 F protein homodimerization activity
GO:0043234 C protein-containing complex
GO:0051205 P protein insertion into membrane
GO:0051262 P protein tetramerization
GO:0051354 P negative regulation of oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0097031 P obsolete mitochondrial respiratory chain complex I biogenesis
GO:0097177 F mitochondrial ribosome binding
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