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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6001 O_BomoEE15401_complete:A_BomoEE_comp68061_c0_seq8
128bp
6002 O_BomoEE15402_5prime_partial:A_BomoEE_comp68061_c0_seq8
123bp
6003 O_BomoEE15403_5prime_partial:A_BomoEE_comp68061_c0_seq8
114bp
6004 O_BomoEE15404_5prime_partial:A_BomoEE_comp68061_c0_seq8
107bp
6005 O_BomoEE15405_5prime_partial:A_BomoEE_comp68061_c0_seq8
100bp
6006 O_BomoEE15406_complete:A_BomoEE_comp68062_c0_seq1
1146bp
 PREDICTED:_protein_expanded_[Bombyx_mori]
GO:0001745 P compound eye morphogenesis
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0005515 F protein binding
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005915 C zonula adherens
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007050 P regulation of cell cycle
GO:0007096 P regulation of exit from mitosis
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007298 P border follicle cell migration
GO:0007444 P imaginal disc development
GO:0008101 P BMP signaling pathway
GO:0008285 P negative regulation of cell population proliferation
GO:0009966 P regulation of signal transduction
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0017124 F SH3 domain binding
GO:0030707 P ovarian follicle cell development
GO:0032456 P endocytic recycling
GO:0035329 P hippo signaling
GO:0035330 P regulation of hippo signaling
GO:0035331 P negative regulation of hippo signaling
GO:0036375 C Kibra-Ex-Mer complex
GO:0040008 P regulation of growth
GO:0042127 P regulation of cell population proliferation
GO:0042327 P positive regulation of phosphorylation
GO:0042981 P regulation of apoptotic process
GO:0045571 P negative regulation of imaginal disc growth
GO:0045595 P regulation of cell differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046620 P regulation of organ growth
GO:0046621 P negative regulation of organ growth
6007 O_BomoEE15407_complete:A_BomoEE_comp68062_c0_seq1
125bp
6008 O_BomoEE15408_complete:A_BomoEE_comp68063_c0_seq1
270bp
 PREDICTED:_out_at_first_protein_[Amyelois_transitella]
GO:0007275 P multicellular organism development
6009 O_BomoEE15409_3prime_partial:A_BomoEE_comp68063_c0_seq1
167bp
 PREDICTED:_WD_repeat-containing_protein_26_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0008150 P biological_process
6010 O_BomoEE1540_3prime_partial:A_BomoEE_comp32114_c0_seq1
788bp
 DNA-directed_RNA_polymerase,_mitochondrial_[Papilio_xuthus]
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006351 P transcription, DNA-templated
GO:0006390 P mitochondrial transcription
GO:0006391 P transcription initiation from mitochondrial promoter
GO:0007005 P mitochondrion organization
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
6011 O_BomoEE15410_complete:A_BomoEE_comp68063_c0_seq1
101bp
6012 O_BomoEE15411_3prime_partial:A_BomoEE_comp68065_c0_seq1
424bp
 PREDICTED:_nuclear_pore_complex_protein_Nup133_[Papilio_xuthus]
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000940 C outer kinetochore
GO:0000973 P posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0005487 F structural constituent of nuclear pore
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005694 C chromosome
GO:0006355 P regulation of transcription, DNA-templated
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006999 P nuclear pore organization
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017056 F structural constituent of nuclear pore
GO:0021915 P neural tube development
GO:0022008 P neurogenesis
GO:0031080 C nuclear pore outer ring
GO:0031965 C nuclear membrane
GO:0048339 P paraxial mesoderm development
GO:0051028 P mRNA transport
GO:0061053 P somite development
6013 O_BomoEE15412_complete:A_BomoEE_comp68066_c0_seq2
272bp
 Uncharacterized_protein_OBRU01_23417,_partial_[Operophtera_brumata]
6014 O_BomoEE15413_3prime_partial:A_BomoEE_comp68066_c0_seq2
158bp
 PREDICTED:_uncharacterized_protein_LOC105664042_isoform_X3_[Megachile_rotundata]
6015 O_BomoEE15414_3prime_partial:A_BomoEE_comp68071_c0_seq1
234bp
 PREDICTED:_PAX3-_and_PAX7-binding_protein_1_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007517 P muscle organ development
GO:0008134 F transcription factor binding
GO:0014842 P regulation of skeletal muscle satellite cell proliferation
GO:0031062 P positive regulation of histone methylation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:2000288 P positive regulation of myoblast proliferation
6016 O_BomoEE15415_5prime_partial:A_BomoEE_comp68071_c0_seq1
147bp
6017 O_BomoEE15416_3prime_partial:A_BomoEE_comp68071_c0_seq2
234bp
 PREDICTED:_PAX3-_and_PAX7-binding_protein_1_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007517 P muscle organ development
GO:0008134 F transcription factor binding
GO:0014842 P regulation of skeletal muscle satellite cell proliferation
GO:0031062 P positive regulation of histone methylation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:2000288 P positive regulation of myoblast proliferation
6018 O_BomoEE15417_5prime_partial:A_BomoEE_comp68071_c0_seq2
147bp
6019 O_BomoEE15418_3prime_partial:A_BomoEE_comp68071_c0_seq3
344bp
 PREDICTED:_PAX3-_and_PAX7-binding_protein_1_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007517 P muscle organ development
GO:0008134 F transcription factor binding
GO:0014842 P regulation of skeletal muscle satellite cell proliferation
GO:0031062 P positive regulation of histone methylation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:2000288 P positive regulation of myoblast proliferation
6020 O_BomoEE15419_5prime_partial:A_BomoEE_comp68071_c0_seq3
147bp
6021 O_BomoEE1541_3prime_partial:A_BomoEE_comp32119_c0_seq1
1102bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_myosin_heavy_chain,_non-muscle_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000281 P mitotic cytokinesis
GO:0001736 P establishment of planar polarity
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005938 C cell cortex
GO:0006936 P muscle contraction
GO:0007297 P ovarian follicle cell migration
GO:0007298 P border follicle cell migration
GO:0007391 P dorsal closure
GO:0007395 P dorsal closure, spreading of leading edge cells
GO:0007435 P salivary gland morphogenesis
GO:0007443 P Malpighian tubule morphogenesis
GO:0007496 P anterior midgut development
GO:0008152 P metabolic process
GO:0008258 P head involution
GO:0016203 P muscle attachment
GO:0016459 C myosin complex
GO:0016460 C myosin II complex
GO:0016461 C unconventional myosin complex
GO:0022008 P neurogenesis
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031036 P myosin II filament assembly
GO:0031252 C cell leading edge
GO:0032027 F myosin light chain binding
GO:0032154 C cleavage furrow
GO:0032507 P maintenance of protein location in cell
GO:0035017 P cuticle pattern formation
GO:0035072 P ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0035159 P regulation of tube length, open tracheal system
GO:0035277 P spiracle morphogenesis, open tracheal system
GO:0035317 P imaginal disc-derived wing hair organization
GO:0042060 P wound healing
GO:0042623 F ATP hydrolysis activity
GO:0044291 C cell-cell contact zone
GO:0045179 C apical cortex
GO:0045200 P establishment of neuroblast polarity
GO:0045214 P sarcomere organization
GO:0046663 P dorsal closure, leading edge cell differentiation
GO:0046664 P dorsal closure, amnioserosa morphology change
GO:0051259 P protein complex oligomerization
GO:0051726 P regulation of cell cycle
GO:0070938 C contractile ring
GO:0070986 P left/right axis specification
GO:0071260 P cellular response to mechanical stimulus
GO:1901739 P regulation of myoblast fusion
6022 O_BomoEE15420_3prime_partial:A_BomoEE_comp68071_c0_seq5
234bp
 PREDICTED:_PAX3-_and_PAX7-binding_protein_1_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007517 P muscle organ development
GO:0008134 F transcription factor binding
GO:0014842 P regulation of skeletal muscle satellite cell proliferation
GO:0031062 P positive regulation of histone methylation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:2000288 P positive regulation of myoblast proliferation
6023 O_BomoEE15421_complete:A_BomoEE_comp68071_c0_seq5
172bp
 PREDICTED:_PAX3-_and_PAX7-binding_protein_1_[Bombyx_mori]
6024 O_BomoEE15422_5prime_partial:A_BomoEE_comp68071_c0_seq5
147bp
6025 O_BomoEE15423_complete:A_BomoEE_comp68072_c0_seq1
110bp
 PREDICTED:_uncharacterized_protein_LOC105842686_[Bombyx_mori]
6026 O_BomoEE15424_complete:A_BomoEE_comp68072_c0_seq2
110bp
 PREDICTED:_uncharacterized_protein_LOC105842686_[Bombyx_mori]
6027 O_BomoEE15425_3prime_partial:A_BomoEE_comp68074_c0_seq3
493bp
 PREDICTED:_acyl-CoA_synthetase_family_member_3,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
6028 O_BomoEE15426_complete:A_BomoEE_comp68074_c0_seq3
100bp
6029 O_BomoEE15427_complete:A_BomoEE_comp68074_c0_seq4
440bp
 PREDICTED:_acyl-CoA_synthetase_family_member_3,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
6030 O_BomoEE15428_complete:A_BomoEE_comp68074_c0_seq4
186bp
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