SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/95730
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4531 O_BomoEE14079_5prime_partial:A_BomoEE_comp67481_c0_seq1
229bp
 PREDICTED:_potassium_channel_subfamily_K_member_18_isoform_X2_[Bombyx_mori]
GO:0005267 F potassium channel activity
GO:0005575 C cellular_component
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006936 P muscle contraction
GO:0006937 P regulation of muscle contraction
GO:0007567 P parturition
GO:0015271 F outward rectifier potassium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022841 F potassium ion leak channel activity
GO:0030322 P stabilization of membrane potential
GO:0040011 P locomotion
GO:0071805 P potassium ion transmembrane transport
4532 O_BomoEE1407_complete:A_BomoEE_comp30249_c0_seq1
198bp
 aminopeptidase_N-like_precursor_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0004177 F aminopeptidase activity
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0046872 F metal ion binding
4533 O_BomoEE14080_complete:A_BomoEE_comp67481_c0_seq2
240bp
 PREDICTED:_potassium_channel_subfamily_K_member_18_isoform_X2_[Bombyx_mori]
GO:0005267 F potassium channel activity
GO:0005575 C cellular_component
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006936 P muscle contraction
GO:0006937 P regulation of muscle contraction
GO:0007567 P parturition
GO:0015271 F outward rectifier potassium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022841 F potassium ion leak channel activity
GO:0030322 P stabilization of membrane potential
GO:0040011 P locomotion
GO:0071805 P potassium ion transmembrane transport
4534 O_BomoEE14081_complete:A_BomoEE_comp67482_c0_seq1
395bp
 PREDICTED:_uncharacterized_protein_LOC101741081_[Bombyx_mori]
GO:0003993 F acid phosphatase activity
GO:0006007 P glucose catabolic process
GO:0008877 F glucose-1-phosphatase activity
GO:0016158 F 3-phytase activity
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0030288 C outer membrane-bounded periplasmic space
GO:0042597 C periplasmic space
4535 O_BomoEE14082_5prime_partial:A_BomoEE_comp67484_c0_seq1
733bp
 PREDICTED:_histidine_decarboxylase_isoform_X1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004398 F histidine decarboxylase activity
GO:0006520 P cellular amino acid metabolic process
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0019752 P carboxylic acid metabolic process
GO:0030170 F pyridoxal phosphate binding
GO:0042051 P compound eye photoreceptor development
GO:0042423 P catecholamine biosynthetic process
GO:0043052 P thermotaxis
4536 O_BomoEE14083_complete:A_BomoEE_comp67484_c0_seq1
134bp
 PREDICTED:_histidine_decarboxylase-like_[Amyelois_transitella]
4537 O_BomoEE14084_internal:A_BomoEE_comp67484_c0_seq2
359bp
 PREDICTED:_histidine_decarboxylase_isoform_X1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004398 F histidine decarboxylase activity
GO:0006520 P cellular amino acid metabolic process
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0019752 P carboxylic acid metabolic process
GO:0030170 F pyridoxal phosphate binding
GO:0042051 P compound eye photoreceptor development
GO:0042423 P catecholamine biosynthetic process
GO:0043052 P thermotaxis
4538 O_BomoEE14085_5prime_partial:A_BomoEE_comp67484_c0_seq3
166bp
 PREDICTED:_histidine_decarboxylase_isoform_X3_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004398 F histidine decarboxylase activity
GO:0006520 P cellular amino acid metabolic process
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0019752 P carboxylic acid metabolic process
GO:0030170 F pyridoxal phosphate binding
GO:0042051 P compound eye photoreceptor development
GO:0042423 P catecholamine biosynthetic process
GO:0043052 P thermotaxis
4539 O_BomoEE14086_complete:A_BomoEE_comp67484_c0_seq3
134bp
 PREDICTED:_histidine_decarboxylase-like_[Amyelois_transitella]
4540 O_BomoEE14087_complete:A_BomoEE_comp67484_c0_seq4
134bp
 PREDICTED:_histidine_decarboxylase-like_[Amyelois_transitella]
4541 O_BomoEE14088_3prime_partial:A_BomoEE_comp67485_c0_seq1
212bp
 PREDICTED:_adenylate_cyclase_type_2-like_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002165 P instar larval or pupal development
GO:0004016 F adenylate cyclase activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0006171 P cAMP biosynthetic process
GO:0007189 P adenylate cyclase-activating G protein-coupled receptor signaling pathway
GO:0007193 P adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway
GO:0009190 P cyclic nucleotide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016829 F lyase activity
GO:0016849 F phosphorus-oxygen lyase activity
GO:0019933 P cAMP-mediated signaling
GO:0035556 P intracellular signal transduction
GO:0040015 P negative regulation of multicellular organism growth
GO:0042594 P response to starvation
GO:0046872 F metal ion binding
4542 O_BomoEE14089_internal:A_BomoEE_comp67485_c0_seq2
103bp
 PREDICTED:_adenylate_cyclase_type_2-like_isoform_X2_[Bombyx_mori]
4543 O_BomoEE1408_5prime_partial:A_BomoEE_comp30260_c0_seq1
341bp
 PREDICTED:_spondin-2-like_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005615 C extracellular space
GO:0005788 C endoplasmic reticulum lumen
GO:0007155 P cell adhesion
GO:0031012 C extracellular matrix
GO:0036066 P protein O-linked fucosylation
GO:0046872 F metal ion binding
4544 O_BomoEE14090_internal:A_BomoEE_comp67485_c0_seq3
277bp
 PREDICTED:_adenylate_cyclase_type_2-like_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002165 P instar larval or pupal development
GO:0004016 F adenylate cyclase activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0006171 P cAMP biosynthetic process
GO:0007189 P adenylate cyclase-activating G protein-coupled receptor signaling pathway
GO:0007193 P adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway
GO:0009190 P cyclic nucleotide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016829 F lyase activity
GO:0016849 F phosphorus-oxygen lyase activity
GO:0019933 P cAMP-mediated signaling
GO:0035556 P intracellular signal transduction
GO:0040015 P negative regulation of multicellular organism growth
GO:0042594 P response to starvation
GO:0046872 F metal ion binding
4545 O_BomoEE14091_5prime_partial:A_BomoEE_comp67492_c0_seq1
279bp
 PREDICTED:_cytoplasmic_dynein_2_heavy_chain_1-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0007018 P microtubule-based movement
GO:0007030 P Golgi organization
GO:0007275 P multicellular organism development
GO:0007368 P determination of left/right symmetry
GO:0007507 P heart development
GO:0008105 P protein localization
GO:0009953 P dorsal/ventral pattern formation
GO:0016020 C membrane
GO:0016485 P protein processing
GO:0016887 F ATP hydrolysis activity
GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0021522 P spinal cord motor neuron differentiation
GO:0030030 P cell projection organization
GO:0030182 P neuron differentiation
GO:0030286 C dynein complex
GO:0030326 P embryonic limb morphogenesis
GO:0030900 P forebrain development
GO:0031512 C motile cilium
GO:0035721 P intraciliary retrograde transport
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0045177 C apical part of cell
GO:0045880 P positive regulation of smoothened signaling pathway
GO:0060271 P cilium assembly
GO:0060976 P coronary vasculature development
GO:0070062 C extracellular exosome
GO:0072372 C cilium
GO:0097542 C ciliary tip
4546 O_BomoEE14092_5prime_partial:A_BomoEE_comp67492_c0_seq2
276bp
 PREDICTED:_cytoplasmic_dynein_2_heavy_chain_1-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005868 C cytoplasmic dynein complex
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0007018 P microtubule-based movement
GO:0007030 P Golgi organization
GO:0007275 P multicellular organism development
GO:0007368 P determination of left/right symmetry
GO:0007507 P heart development
GO:0008105 P protein localization
GO:0009953 P dorsal/ventral pattern formation
GO:0016020 C membrane
GO:0016485 P protein processing
GO:0016887 F ATP hydrolysis activity
GO:0021522 P spinal cord motor neuron differentiation
GO:0030030 P cell projection organization
GO:0030182 P neuron differentiation
GO:0030286 C dynein complex
GO:0030326 P embryonic limb morphogenesis
GO:0030900 P forebrain development
GO:0031512 C motile cilium
GO:0035721 P intraciliary retrograde transport
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0045177 C apical part of cell
GO:0045880 P positive regulation of smoothened signaling pathway
GO:0060271 P cilium assembly
GO:0060976 P coronary vasculature development
GO:0070062 C extracellular exosome
4547 O_BomoEE14093_5prime_partial:A_BomoEE_comp67493_c0_seq1
137bp
 Bm-ok_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005395 F obsolete eye pigment precursor transporter activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006726 P eye pigment biosynthetic process
GO:0006727 P ommochrome biosynthetic process
GO:0006810 P transport
GO:0006856 P eye pigment precursor transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0031409 F pigment binding
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
4548 O_BomoEE14094_complete:A_BomoEE_comp67493_c0_seq2
120bp
 Bm-ok_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005395 F obsolete eye pigment precursor transporter activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006726 P eye pigment biosynthetic process
GO:0006727 P ommochrome biosynthetic process
GO:0006810 P transport
GO:0006856 P eye pigment precursor transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0031409 F pigment binding
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
4549 O_BomoEE14095_complete:A_BomoEE_comp67495_c0_seq1
124bp
4550 O_BomoEE14096_complete:A_BomoEE_comp67495_c0_seq5
124bp
4551 O_BomoEE14097_complete:A_BomoEE_comp67496_c0_seq2
104bp
4552 O_BomoEE14098_complete:A_BomoEE_comp67499_c0_seq1
565bp
 Uncharacterized_protein_OBRU01_14198_[Operophtera_brumata]
4553 O_BomoEE14099_3prime_partial:A_BomoEE_comp67500_c0_seq1
171bp
4554 O_BomoEE1409_5prime_partial:A_BomoEE_comp30260_c0_seq2
365bp
 PREDICTED:_spondin-2-like_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005615 C extracellular space
GO:0005788 C endoplasmic reticulum lumen
GO:0007155 P cell adhesion
GO:0031012 C extracellular matrix
GO:0036066 P protein O-linked fucosylation
GO:0046872 F metal ion binding
4555 O_BomoEE140_internal:A_BomoEE_comp2449_c0_seq1
423bp
 PREDICTED:_uncharacterized_protein_LOC105395769,_partial_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
4556 O_BomoEE14100_complete:A_BomoEE_comp67500_c0_seq1
123bp
 Zinc_finger_protein_845,_partial_[Papilio_xuthus]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
4557 O_BomoEE14101_complete:A_BomoEE_comp67500_c0_seq1
112bp
4558 O_BomoEE14102_3prime_partial:A_BomoEE_comp67502_c0_seq1
180bp
 PREDICTED:_MICAL-like_protein_1_isoform_X2_[Bombyx_mori]
4559 O_BomoEE14103_complete:A_BomoEE_comp67502_c0_seq2
112bp
 hypothetical_protein_KGM_09034_[Danaus_plexippus]
4560 O_BomoEE14104_3prime_partial:A_BomoEE_comp67502_c0_seq4
136bp
 PREDICTED:_MICAL-like_protein_1_isoform_X2_[Bombyx_mori]
previous next from show/95730

- SilkBase 1999-2023 -