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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4501 O_BomoEE14051_complete:A_BomoEE_comp67442_c0_seq1
102bp
4502 O_BomoEE14052_complete:A_BomoEE_comp67443_c0_seq1
569bp
 PREDICTED:_CCR4-NOT_transcription_complex_subunit_10-like_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0008150 P biological_process
GO:0030014 C CCR4-NOT complex
GO:0031047 P gene silencing by RNA
4503 O_BomoEE14053_complete:A_BomoEE_comp67443_c0_seq1
212bp
 PREDICTED:_ribonuclease_P_protein_subunit_p29_[Plutella_xylostella]
GO:0000171 F ribonuclease MRP activity
GO:0000172 C ribonuclease MRP complex
GO:0003723 F RNA binding
GO:0004526 F ribonuclease P activity
GO:0004540 F ribonuclease activity
GO:0005634 C nucleus
GO:0005655 C nucleolar ribonuclease P complex
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0006379 P mRNA cleavage
GO:0008033 P tRNA processing
GO:0016787 F hydrolase activity
GO:0030677 C ribonuclease P complex
GO:0033204 F ribonuclease P RNA binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
4504 O_BomoEE14054_complete:A_BomoEE_comp67445_c0_seq1
111bp
4505 O_BomoEE14055_complete:A_BomoEE_comp67445_c0_seq2
111bp
4506 O_BomoEE14056_5prime_partial:A_BomoEE_comp67446_c0_seq1
141bp
4507 O_BomoEE14057_5prime_partial:A_BomoEE_comp67446_c0_seq2
135bp
4508 O_BomoEE14058_5prime_partial:A_BomoEE_comp67447_c0_seq1
118bp
4509 O_BomoEE14059_internal:A_BomoEE_comp67456_c0_seq1
117bp
 PREDICTED:_uncharacterized_protein_LOC105842707_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4510 O_BomoEE1405_internal:A_BomoEE_comp30233_c1_seq1
107bp
4511 O_BomoEE14060_3prime_partial:A_BomoEE_comp67456_c1_seq1
304bp
 TRAS4_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4512 O_BomoEE14061_complete:A_BomoEE_comp67458_c0_seq2
139bp
 PREDICTED:_magnesium_transporter_NIPA2_[Bombyx_mori]
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015095 F magnesium ion transmembrane transporter activity
GO:0015693 P magnesium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:1903830 P magnesium ion transmembrane transport
4513 O_BomoEE14062_complete:A_BomoEE_comp67458_c0_seq3
354bp
 PREDICTED:_magnesium_transporter_NIPA2_[Bombyx_mori]
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015095 F magnesium ion transmembrane transporter activity
GO:0015693 P magnesium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:1903830 P magnesium ion transmembrane transport
4514 O_BomoEE14063_complete:A_BomoEE_comp67458_c0_seq4
233bp
 PREDICTED:_magnesium_transporter_NIPA2_[Bombyx_mori]
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015095 F magnesium ion transmembrane transporter activity
GO:0015693 P magnesium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:1903830 P magnesium ion transmembrane transport
4515 O_BomoEE14064_complete:A_BomoEE_comp67458_c0_seq5
199bp
 PREDICTED:_magnesium_transporter_NIPA2_[Bombyx_mori]
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015095 F magnesium ion transmembrane transporter activity
GO:0015693 P magnesium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:1903830 P magnesium ion transmembrane transport
4516 O_BomoEE14065_complete:A_BomoEE_comp67458_c0_seq5
100bp
 PREDICTED:_magnesium_transporter_NIPA2_[Amyelois_transitella]
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015095 F magnesium ion transmembrane transporter activity
GO:0015693 P magnesium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:1903830 P magnesium ion transmembrane transport
4517 O_BomoEE14066_5prime_partial:A_BomoEE_comp67459_c0_seq2
117bp
4518 O_BomoEE14067_5prime_partial:A_BomoEE_comp67470_c0_seq3
117bp
 PREDICTED:_alpha-tocopherol_transfer_protein-like_isoform_X1_[Bombyx_mori]
GO:0001890 P placenta development
GO:0001892 P embryonic placenta development
GO:0005215 F transporter activity
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005770 C late endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0007584 P response to nutrient
GO:0008289 F lipid binding
GO:0008431 F vitamin E binding
GO:0009268 P response to pH
GO:0009636 P response to toxic substance
GO:0019842 F vitamin binding
GO:0032502 P developmental process
GO:0042360 P vitamin E metabolic process
GO:0043325 F phosphatidylinositol-3,4-bisphosphate binding
GO:0046909 P obsolete intermembrane transport
GO:0051180 P vitamin transport
GO:0051452 P intracellular pH reduction
GO:0060548 P negative regulation of cell death
GO:0090212 P negative regulation of establishment of blood-brain barrier
4519 O_BomoEE14068_complete:A_BomoEE_comp67472_c1_seq1
249bp
 PREDICTED:_homeobox_protein_six1a-like_[Amyelois_transitella]
GO:0001744 P insect visual primordium formation
GO:0001745 P compound eye morphogenesis
GO:0001746 P Bolwig's organ morphogenesis
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0007455 P eye-antennal disc morphogenesis
GO:0007623 P circadian rhythm
GO:0008134 F transcription factor binding
GO:0008347 P glial cell migration
GO:0009649 P entrainment of circadian clock
GO:0035271 P ring gland development
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048749 P compound eye development
4520 O_BomoEE14069_complete:A_BomoEE_comp67472_c1_seq1
149bp
 PREDICTED:_ribonuclease_P_protein_subunit_p20_[Plutella_xylostella]
GO:0001682 P tRNA 5'-leader removal
GO:0003676 F nucleic acid binding
GO:0004526 F ribonuclease P activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005655 C nucleolar ribonuclease P complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0008033 P tRNA processing
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
4521 O_BomoEE1406_complete:A_BomoEE_comp30244_c0_seq1
246bp
 PREDICTED:_C-type_lectin_11_isoform_X1_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0030246 F carbohydrate binding
4522 O_BomoEE14070_complete:A_BomoEE_comp67472_c1_seq1
136bp
 Tm_protein_[Bombyx_mori]
GO:0002230 P positive regulation of defense response to virus by host
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006874 P cellular calcium ion homeostasis
GO:0007283 P spermatogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
4523 O_BomoEE14071_complete:A_BomoEE_comp67472_c1_seq2
249bp
 PREDICTED:_homeobox_protein_six1a-like_[Amyelois_transitella]
GO:0001744 P insect visual primordium formation
GO:0001745 P compound eye morphogenesis
GO:0001746 P Bolwig's organ morphogenesis
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0007455 P eye-antennal disc morphogenesis
GO:0007623 P circadian rhythm
GO:0008134 F transcription factor binding
GO:0008347 P glial cell migration
GO:0009649 P entrainment of circadian clock
GO:0035271 P ring gland development
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048749 P compound eye development
4524 O_BomoEE14072_complete:A_BomoEE_comp67472_c1_seq2
136bp
 Tm_protein_[Bombyx_mori]
GO:0002230 P positive regulation of defense response to virus by host
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006874 P cellular calcium ion homeostasis
GO:0007283 P spermatogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
4525 O_BomoEE14073_complete:A_BomoEE_comp67474_c0_seq1
315bp
 PREDICTED:_etoposide-induced_protein_2.4_homolog_isoform_X2_[Papilio_machaon]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006914 P autophagy
GO:0006915 P apoptotic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030308 P negative regulation of cell growth
GO:0031965 C nuclear membrane
4526 O_BomoEE14074_complete:A_BomoEE_comp67474_c0_seq1
115bp
4527 O_BomoEE14075_complete:A_BomoEE_comp67474_c0_seq2
187bp
 PREDICTED:_etoposide-induced_protein_2.4_homolog_isoform_X2_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006914 P autophagy
GO:0006915 P apoptotic process
GO:0008630 P intrinsic apoptotic signaling pathway in response to DNA damage
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030308 P negative regulation of cell growth
GO:0031965 C nuclear membrane
GO:0042493 P response to xenobiotic stimulus
GO:0050885 P neuromuscular process controlling balance
GO:0071494 P cellular response to UV-C
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
4528 O_BomoEE14076_complete:A_BomoEE_comp67474_c0_seq2
115bp
4529 O_BomoEE14077_complete:A_BomoEE_comp67474_c0_seq3
146bp
 PREDICTED:_etoposide-induced_protein_2.4_homolog_[Papilio_polytes]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006914 P autophagy
GO:0006915 P apoptotic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030308 P negative regulation of cell growth
GO:0031965 C nuclear membrane
4530 O_BomoEE14078_complete:A_BomoEE_comp67474_c0_seq4
156bp
 PREDICTED:_etoposide-induced_protein_2.4_homolog_[Papilio_polytes]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006914 P autophagy
GO:0006915 P apoptotic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030308 P negative regulation of cell growth
GO:0031965 C nuclear membrane
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