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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4291 O_BomoEE13863_5prime_partial:A_BomoEE_comp67350_c0_seq4
194bp
 PREDICTED:_thyroid_transcription_factor_1-like_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0043565 F sequence-specific DNA binding
4292 O_BomoEE13864_complete:A_BomoEE_comp67352_c0_seq1
678bp
 PREDICTED:_putative_phospholipase_B-like_lamina_ancestor_[Amyelois_transitella]
GO:0002121 P inter-male aggressive behavior
GO:0003674 F molecular_function
GO:0005576 C extracellular region
GO:0006629 P lipid metabolic process
GO:0007444 P imaginal disc development
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0046843 P dorsal appendage formation
4293 O_BomoEE13865_complete:A_BomoEE_comp67352_c0_seq1
120bp
4294 O_BomoEE13866_complete:A_BomoEE_comp67352_c0_seq2
678bp
 PREDICTED:_putative_phospholipase_B-like_lamina_ancestor_[Amyelois_transitella]
GO:0002121 P inter-male aggressive behavior
GO:0003674 F molecular_function
GO:0005576 C extracellular region
GO:0006629 P lipid metabolic process
GO:0007444 P imaginal disc development
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0046843 P dorsal appendage formation
4295 O_BomoEE13867_complete:A_BomoEE_comp67352_c0_seq2
120bp
4296 O_BomoEE13868_complete:A_BomoEE_comp67353_c1_seq1
142bp
4297 O_BomoEE13869_complete:A_BomoEE_comp67353_c1_seq2
1134bp
 PREDICTED:_plasma_membrane_calcium-transporting_ATPase_2_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005388 F P-type calcium transporter activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0006874 P cellular calcium ion homeostasis
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0030165 F PDZ domain binding
GO:0034220 P ion transmembrane transport
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0070588 P calcium ion transmembrane transport
GO:1903561 C extracellular vesicle
GO:1903779 P regulation of cardiac conduction
4298 O_BomoEE1386_complete:A_BomoEE_comp29930_c0_seq1
101bp
4299 O_BomoEE13870_complete:A_BomoEE_comp67353_c1_seq2
240bp
 hypothetical_protein_T4D_3770_[Trichinella_pseudospiralis]
4300 O_BomoEE13871_5prime_partial:A_BomoEE_comp67353_c2_seq1
119bp
4301 O_BomoEE13872_3prime_partial:A_BomoEE_comp67354_c0_seq1
827bp
 PREDICTED:_DNA_topoisomerase_3-alpha_[Amyelois_transitella]
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003916 F DNA topoisomerase activity
GO:0003917 F DNA topoisomerase type I (single strand cut, ATP-independent) activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006265 P DNA topological change
GO:0007059 P chromosome segregation
GO:0016853 F isomerase activity
GO:0044822 F RNA binding
4302 O_BomoEE13873_complete:A_BomoEE_comp67354_c0_seq1
302bp
4303 O_BomoEE13874_complete:A_BomoEE_comp67354_c0_seq2
284bp
 PREDICTED:_DNA_topoisomerase_3-alpha_[Amyelois_transitella]
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0003677 F DNA binding
GO:0003916 F DNA topoisomerase activity
GO:0003917 F DNA topoisomerase type I (single strand cut, ATP-independent) activity
GO:0004520 F endodeoxyribonuclease activity
GO:0006265 P DNA topological change
GO:0016853 F isomerase activity
GO:0051965 P positive regulation of synapse assembly
4304 O_BomoEE13875_3prime_partial:A_BomoEE_comp67354_c0_seq3
269bp
 PREDICTED:_uncharacterized_protein_LOC106135570_[Amyelois_transitella]
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003916 F DNA topoisomerase activity
GO:0003917 F DNA topoisomerase type I (single strand cut, ATP-independent) activity
GO:0005634 C nucleus
GO:0006265 P DNA topological change
GO:0007059 P chromosome segregation
GO:0016853 F isomerase activity
GO:0044822 F RNA binding
4305 O_BomoEE13876_3prime_partial:A_BomoEE_comp67354_c0_seq3
192bp
4306 O_BomoEE13877_3prime_partial:A_BomoEE_comp67354_c0_seq3
100bp
 hypothetical_protein_OCBIM_22006617mg_[Octopus_bimaculoides]
4307 O_BomoEE13878_5prime_partial:A_BomoEE_comp67358_c0_seq1
144bp
 PREDICTED:_mod(mdg4)-heS00531_isoform_X1_[Bombyx_mori]
4308 O_BomoEE13879_internal:A_BomoEE_comp67358_c0_seq2
144bp
 PREDICTED:_mod(mdg4)-heS00531_isoform_X1_[Bombyx_mori]
4309 O_BomoEE1387_5prime_partial:A_BomoEE_comp29947_c0_seq1
391bp
 hypothetical_protein_KGM_21444_[Danaus_plexippus]
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0034451 C centriolar satellite
GO:0036158 P outer dynein arm assembly
GO:0036159 P inner dynein arm assembly
GO:0042995 C cell projection
GO:0044458 P motile cilium assembly
GO:0046872 F metal ion binding
4310 O_BomoEE13880_5prime_partial:A_BomoEE_comp67358_c0_seq3
232bp
 PREDICTED:_mod(mdg4)-heS00531_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0008150 P biological_process
GO:0046872 F metal ion binding
4311 O_BomoEE13881_complete:A_BomoEE_comp67359_c0_seq1
447bp
 PREDICTED:_zinc_finger_protein_136-like_isoform_X3_[Bombyx_mori]
GO:0000976 F transcription cis-regulatory region binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0042254 P ribosome biogenesis
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0071294 P cellular response to zinc ion
4312 O_BomoEE13882_complete:A_BomoEE_comp67359_c0_seq2
398bp
 PREDICTED:_zinc_finger_protein_136-like_isoform_X3_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
4313 O_BomoEE13883_complete:A_BomoEE_comp67359_c0_seq2
183bp
4314 O_BomoEE13884_complete:A_BomoEE_comp67359_c0_seq3
395bp
 PREDICTED:_zinc_finger_protein_233-like_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0042803 F protein homodimerization activity
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
4315 O_BomoEE13885_5prime_partial:A_BomoEE_comp67364_c0_seq1
155bp
 PREDICTED:_HIRA-interacting_protein_3-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0008150 P biological_process
4316 O_BomoEE13886_5prime_partial:A_BomoEE_comp67364_c0_seq2
128bp
 PREDICTED:_HIRA-interacting_protein_3-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0008150 P biological_process
4317 O_BomoEE13887_complete:A_BomoEE_comp67365_c0_seq1
634bp
 PREDICTED:_sodium-independent_sulfate_anion_transporter_isoform_X2_[Bombyx_mori]
GO:0005254 F chloride channel activity
GO:0005654 C nucleoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0008271 F secondary active sulfate transmembrane transporter activity
GO:0008272 P sulfate transport
GO:0008509 F anion transmembrane transporter activity
GO:0015106 F bicarbonate transmembrane transporter activity
GO:0015116 F sulfate transmembrane transporter activity
GO:0015301 F anion:anion antiporter activity
GO:0015701 P bicarbonate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019531 F oxalate transmembrane transporter activity
GO:0019532 P oxalate transport
GO:0042391 P regulation of membrane potential
GO:0043231 C intracellular membrane-bounded organelle
GO:0051453 P regulation of intracellular pH
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
GO:1902358 P sulfate transmembrane transport
GO:1902476 P chloride transmembrane transport
4318 O_BomoEE13888_complete:A_BomoEE_comp67365_c0_seq1
124bp
4319 O_BomoEE13889_complete:A_BomoEE_comp67365_c0_seq1
104bp
4320 O_BomoEE1388_5prime_partial:A_BomoEE_comp30029_c0_seq1
185bp
 cuticular_protein_RR-1_motif_9_precursor_[Bombyx_mori]
GO:0042302 F structural constituent of cuticle
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