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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4231 O_BomoEE13809_5prime_partial:A_BomoEE_comp67306_c1_seq2
217bp
 zinc-containing_alcohol_dehydrogenase_[Bombyx_mori]
GO:0005975 P carbohydrate metabolic process
GO:0008270 F zinc ion binding
GO:0009405 P obsolete pathogenesis
GO:0016491 F oxidoreductase activity
GO:0033709 F D-arabinitol dehydrogenase, D-ribulose forming (NADP+) activity
GO:0042995 C cell projection
GO:0046872 F metal ion binding
GO:0052677 F D-arabinitol dehydrogenase, D-xylulose forming (NADP+) activity
GO:0055114 P obsolete oxidation-reduction process
4232 O_BomoEE1380_5prime_partial:A_BomoEE_comp29877_c0_seq1
163bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Trichogramma_pretiosum]
4233 O_BomoEE13810_complete:A_BomoEE_comp67307_c0_seq1
119bp
 PREDICTED:_transmembrane_protein_181_[Bombyx_mori]
GO:0009405 P obsolete pathogenesis
GO:0015643 F toxic substance binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4234 O_BomoEE13811_complete:A_BomoEE_comp67307_c0_seq2
419bp
 PREDICTED:_transmembrane_protein_181_[Bombyx_mori]
GO:0009405 P obsolete pathogenesis
GO:0015643 F toxic substance binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4235 O_BomoEE13812_complete:A_BomoEE_comp67307_c0_seq2
109bp
4236 O_BomoEE13813_complete:A_BomoEE_comp67307_c0_seq3
233bp
 PREDICTED:_transmembrane_protein_181_[Bombyx_mori]
GO:0009405 P obsolete pathogenesis
GO:0015643 F toxic substance binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4237 O_BomoEE13814_5prime_partial:A_BomoEE_comp67309_c0_seq1
118bp
4238 O_BomoEE13815_complete:A_BomoEE_comp67311_c0_seq1
168bp
 putative_metaxin_1_[Operophtera_brumata]
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0006626 P protein targeting to mitochondrion
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4239 O_BomoEE13816_complete:A_BomoEE_comp67311_c0_seq5
168bp
 putative_metaxin_1_[Operophtera_brumata]
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0006626 P protein targeting to mitochondrion
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4240 O_BomoEE13817_complete:A_BomoEE_comp67311_c0_seq6
318bp
 PREDICTED:_metaxin-1-like_[Amyelois_transitella]
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0006626 P protein targeting to mitochondrion
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4241 O_BomoEE13818_complete:A_BomoEE_comp67311_c0_seq7
171bp
 PREDICTED:_metaxin-1-like,_partial_[Amyelois_transitella]
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0006626 P protein targeting to mitochondrion
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4242 O_BomoEE13819_complete:A_BomoEE_comp67311_c0_seq8
246bp
 PREDICTED:_metaxin-1-like_[Amyelois_transitella]
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0006626 P protein targeting to mitochondrion
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4243 O_BomoEE1381_complete:A_BomoEE_comp29877_c0_seq2
191bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X3_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
4244 O_BomoEE13820_complete:A_BomoEE_comp67312_c0_seq1
248bp
 PREDICTED:_uncharacterized_protein_LOC101742417_[Bombyx_mori]
4245 O_BomoEE13821_3prime_partial:A_BomoEE_comp67312_c0_seq2
447bp
 PREDICTED:_uncharacterized_protein_LOC101742417_[Bombyx_mori]
4246 O_BomoEE13822_complete:A_BomoEE_comp67313_c0_seq1
243bp
 PREDICTED:_nischarin_[Amyelois_transitella]
GO:0005178 F integrin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006006 P glucose metabolic process
GO:0006915 P apoptotic process
GO:0008217 P regulation of blood pressure
GO:0016020 C membrane
GO:0016601 P Rac protein signal transduction
GO:0030036 P actin cytoskeleton organization
GO:0030336 P negative regulation of cell migration
GO:0032228 P regulation of synaptic transmission, GABAergic
GO:0035091 F phosphatidylinositol binding
GO:0042802 F identical protein binding
GO:0048243 P norepinephrine secretion
GO:0055037 C recycling endosome
4247 O_BomoEE13823_complete:A_BomoEE_comp67313_c0_seq1
160bp
 PREDICTED:_nischarin-like_[Bombyx_mori]
GO:0005178 F integrin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006006 P glucose metabolic process
GO:0006915 P apoptotic process
GO:0008217 P regulation of blood pressure
GO:0016020 C membrane
GO:0016601 P Rac protein signal transduction
GO:0030036 P actin cytoskeleton organization
GO:0030336 P negative regulation of cell migration
GO:0032228 P regulation of synaptic transmission, GABAergic
GO:0035091 F phosphatidylinositol binding
GO:0042802 F identical protein binding
GO:0048243 P norepinephrine secretion
GO:0055037 C recycling endosome
4248 O_BomoEE13824_complete:A_BomoEE_comp67313_c0_seq2
309bp
 PREDICTED:_nischarin_[Amyelois_transitella]
GO:0005178 F integrin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006006 P glucose metabolic process
GO:0006915 P apoptotic process
GO:0008217 P regulation of blood pressure
GO:0016020 C membrane
GO:0016601 P Rac protein signal transduction
GO:0030036 P actin cytoskeleton organization
GO:0030336 P negative regulation of cell migration
GO:0032228 P regulation of synaptic transmission, GABAergic
GO:0035091 F phosphatidylinositol binding
GO:0042802 F identical protein binding
GO:0048243 P norepinephrine secretion
GO:0055037 C recycling endosome
4249 O_BomoEE13825_complete:A_BomoEE_comp67313_c0_seq2
150bp
 PREDICTED:_nischarin-like_[Bombyx_mori]
GO:0005178 F integrin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006006 P glucose metabolic process
GO:0006915 P apoptotic process
GO:0008217 P regulation of blood pressure
GO:0016020 C membrane
GO:0016601 P Rac protein signal transduction
GO:0030036 P actin cytoskeleton organization
GO:0030336 P negative regulation of cell migration
GO:0032228 P regulation of synaptic transmission, GABAergic
GO:0035091 F phosphatidylinositol binding
GO:0042802 F identical protein binding
GO:0048243 P norepinephrine secretion
GO:0055037 C recycling endosome
4250 O_BomoEE13826_complete:A_BomoEE_comp67313_c0_seq3
465bp
 PREDICTED:_nischarin_[Amyelois_transitella]
GO:0005178 F integrin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006006 P glucose metabolic process
GO:0006915 P apoptotic process
GO:0008217 P regulation of blood pressure
GO:0016020 C membrane
GO:0016601 P Rac protein signal transduction
GO:0030036 P actin cytoskeleton organization
GO:0030336 P negative regulation of cell migration
GO:0032228 P regulation of synaptic transmission, GABAergic
GO:0035091 F phosphatidylinositol binding
GO:0042802 F identical protein binding
GO:0048243 P norepinephrine secretion
GO:0055037 C recycling endosome
4251 O_BomoEE13827_complete:A_BomoEE_comp67313_c0_seq4
304bp
 PREDICTED:_nischarin_[Amyelois_transitella]
GO:0005178 F integrin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006006 P glucose metabolic process
GO:0006915 P apoptotic process
GO:0008217 P regulation of blood pressure
GO:0016020 C membrane
GO:0016601 P Rac protein signal transduction
GO:0030036 P actin cytoskeleton organization
GO:0030336 P negative regulation of cell migration
GO:0032228 P regulation of synaptic transmission, GABAergic
GO:0035091 F phosphatidylinositol binding
GO:0042802 F identical protein binding
GO:0048243 P norepinephrine secretion
GO:0055037 C recycling endosome
4252 O_BomoEE13828_complete:A_BomoEE_comp67313_c0_seq4
162bp
 PREDICTED:_nischarin-like_[Bombyx_mori]
GO:0005178 F integrin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006006 P glucose metabolic process
GO:0006915 P apoptotic process
GO:0008217 P regulation of blood pressure
GO:0016020 C membrane
GO:0016601 P Rac protein signal transduction
GO:0030036 P actin cytoskeleton organization
GO:0030336 P negative regulation of cell migration
GO:0032228 P regulation of synaptic transmission, GABAergic
GO:0035091 F phosphatidylinositol binding
GO:0042802 F identical protein binding
GO:0048243 P norepinephrine secretion
GO:0055037 C recycling endosome
4253 O_BomoEE13829_complete:A_BomoEE_comp67315_c0_seq1
169bp
 PREDICTED:_methionine-R-sulfoxide_reductase_B1_isoform_X2_[Papilio_polytes]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006979 P response to oxidative stress
GO:0007015 P actin filament organization
GO:0007411 P axon guidance
GO:0007526 P larval somatic muscle development
GO:0008270 F zinc ion binding
GO:0008407 P chaeta morphogenesis
GO:0016491 F oxidoreductase activity
GO:0016671 F oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
GO:0018206 P peptidyl-methionine modification
GO:0030041 P actin filament polymerization
GO:0030091 P protein repair
GO:0033743 F peptide-methionine (R)-S-oxide reductase activity
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070191 F methionine-R-sulfoxide reductase activity
4254 O_BomoEE1382_5prime_partial:A_BomoEE_comp29877_c0_seq2
135bp
 putative_pol-like_protein,_partial_[Operophtera_brumata]
4255 O_BomoEE13830_complete:A_BomoEE_comp67315_c0_seq2
130bp
 PREDICTED:_methionine-R-sulfoxide_reductase_B1_isoform_X2_[Papilio_polytes]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006979 P response to oxidative stress
GO:0007015 P actin filament organization
GO:0007411 P axon guidance
GO:0007526 P larval somatic muscle development
GO:0008270 F zinc ion binding
GO:0008407 P chaeta morphogenesis
GO:0016491 F oxidoreductase activity
GO:0016671 F oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
GO:0018206 P peptidyl-methionine modification
GO:0030041 P actin filament polymerization
GO:0030091 P protein repair
GO:0033743 F peptide-methionine (R)-S-oxide reductase activity
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070191 F methionine-R-sulfoxide reductase activity
4256 O_BomoEE13831_3prime_partial:A_BomoEE_comp67321_c0_seq2
127bp
4257 O_BomoEE13832_complete:A_BomoEE_comp67325_c0_seq1
638bp
 Splicing_factor_3A_subunit_1_[Papilio_xuthus]
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005684 C U2-type spliceosomal complex
GO:0005686 C U2 snRNP
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
GO:0071004 C U2-type prespliceosome
GO:0071013 C catalytic step 2 spliceosome
4258 O_BomoEE13833_complete:A_BomoEE_comp67325_c0_seq1
356bp
4259 O_BomoEE13834_complete:A_BomoEE_comp67325_c0_seq1
161bp
4260 O_BomoEE13835_complete:A_BomoEE_comp67325_c0_seq1
108bp
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