SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/95730
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4081 O_BomoEE13674_5prime_partial:A_BomoEE_comp67192_c0_seq1
120bp
 PREDICTED:_uncharacterized_protein_LOC101745338_[Bombyx_mori]
4082 O_BomoEE13675_internal:A_BomoEE_comp67192_c0_seq3
105bp
 hypothetical_protein_RR48_06038_[Papilio_machaon]
4083 O_BomoEE13676_5prime_partial:A_BomoEE_comp67193_c0_seq1
699bp
 PREDICTED:_uncharacterized_protein_LOC101740831_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006915 P apoptotic process
GO:0008150 P biological_process
4084 O_BomoEE13677_complete:A_BomoEE_comp67193_c0_seq1
146bp
4085 O_BomoEE13678_internal:A_BomoEE_comp67198_c0_seq1
770bp
 PREDICTED:_unconventional_myosin-Va_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005794 C Golgi apparatus
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0016459 C myosin complex
GO:0031941 C filamentous actin
GO:0032593 C insulin-responsive compartment
GO:0032869 P cellular response to insulin stimulus
GO:0060001 F minus-end directed microfilament motor activity
GO:0072659 P protein localization to plasma membrane
4086 O_BomoEE13679_5prime_partial:A_BomoEE_comp67198_c0_seq1
243bp
4087 O_BomoEE1367_5prime_partial:A_BomoEE_comp29794_c0_seq1
131bp
4088 O_BomoEE13680_complete:A_BomoEE_comp67198_c0_seq1
151bp
4089 O_BomoEE13681_complete:A_BomoEE_comp67198_c0_seq1
127bp
4090 O_BomoEE13682_5prime_partial:A_BomoEE_comp67198_c0_seq2
533bp
 PREDICTED:_unconventional_myosin-Va_[Bombyx_mori]
GO:0000146 F microfilament motor activity
GO:0000149 F SNARE binding
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0008021 C synaptic vesicle
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016192 P vesicle-mediated transport
GO:0016459 C myosin complex
GO:0017075 F syntaxin-1 binding
GO:0017157 P regulation of exocytosis
GO:0030048 P actin filament-based movement
GO:0030050 P vesicle transport along actin filament
GO:0030141 C secretory granule
GO:0030424 C axon
GO:0032252 P secretory granule localization
GO:0032593 C insulin-responsive compartment
GO:0032869 P cellular response to insulin stimulus
GO:0042642 C actomyosin, myosin complex part
GO:0043005 C neuron projection
GO:0043008 F ATP-dependent protein binding
GO:0043025 C neuronal cell body
GO:0043473 P pigmentation
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0048306 F calcium-dependent protein binding
GO:0072659 P protein localization to plasma membrane
4091 O_BomoEE13683_complete:A_BomoEE_comp67198_c0_seq2
151bp
4092 O_BomoEE13684_complete:A_BomoEE_comp67198_c0_seq2
127bp
4093 O_BomoEE13685_complete:A_BomoEE_comp67205_c0_seq1
491bp
 PREDICTED:_serine/threonine-protein_phosphatase_5_[Amyelois_transitella]
GO:0000165 P MAPK cascade
GO:0001933 P negative regulation of protein phosphorylation
GO:0001965 F G-protein alpha-subunit binding
GO:0003723 F RNA binding
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006470 P protein dephosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007067 P mitotic cell cycle
GO:0008017 F microtubule binding
GO:0008289 F lipid binding
GO:0010288 P response to lead ion
GO:0016020 C membrane
GO:0016576 P histone dephosphorylation
GO:0016787 F hydrolase activity
GO:0031072 F heat shock protein binding
GO:0042802 F identical protein binding
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043204 C perikaryon
GO:0043231 C intracellular membrane-bounded organelle
GO:0043234 C protein-containing complex
GO:0043278 P response to morphine
GO:0043531 F ADP binding
GO:0046872 F metal ion binding
GO:0051259 P protein complex oligomerization
GO:0051291 P protein heterooligomerization
GO:0060548 P negative regulation of cell death
GO:0070301 P cellular response to hydrogen peroxide
GO:0071276 P cellular response to cadmium ion
GO:0071944 C cell periphery
GO:1901215 P negative regulation of neuron death
GO:1990635 C proximal dendrite
GO:2000324 P positive regulation of glucocorticoid receptor signaling pathway
4094 O_BomoEE13686_complete:A_BomoEE_comp67205_c0_seq3
491bp
 PREDICTED:_serine/threonine-protein_phosphatase_5_[Amyelois_transitella]
GO:0000165 P MAPK cascade
GO:0001933 P negative regulation of protein phosphorylation
GO:0001965 F G-protein alpha-subunit binding
GO:0003723 F RNA binding
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006470 P protein dephosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007067 P mitotic cell cycle
GO:0008017 F microtubule binding
GO:0008289 F lipid binding
GO:0010288 P response to lead ion
GO:0016020 C membrane
GO:0016576 P histone dephosphorylation
GO:0016787 F hydrolase activity
GO:0031072 F heat shock protein binding
GO:0042802 F identical protein binding
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043204 C perikaryon
GO:0043231 C intracellular membrane-bounded organelle
GO:0043234 C protein-containing complex
GO:0043278 P response to morphine
GO:0043531 F ADP binding
GO:0046872 F metal ion binding
GO:0051259 P protein complex oligomerization
GO:0051291 P protein heterooligomerization
GO:0060548 P negative regulation of cell death
GO:0070301 P cellular response to hydrogen peroxide
GO:0071276 P cellular response to cadmium ion
GO:0071944 C cell periphery
GO:1901215 P negative regulation of neuron death
GO:1990635 C proximal dendrite
GO:2000324 P positive regulation of glucocorticoid receptor signaling pathway
4095 O_BomoEE13687_complete:A_BomoEE_comp67205_c0_seq3
100bp
4096 O_BomoEE13688_3prime_partial:A_BomoEE_comp67208_c0_seq1
1039bp
 hypothetical_protein_KGM_10034_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0046872 F metal ion binding
4097 O_BomoEE13689_5prime_partial:A_BomoEE_comp67208_c0_seq1
452bp
4098 O_BomoEE1368_complete:A_BomoEE_comp29827_c0_seq1
186bp
 PREDICTED:_pro-resilin-like_[Papilio_xuthus]
GO:0005576 C extracellular region
GO:0008010 F structural constituent of chitin-based larval cuticle
GO:0008061 F chitin binding
GO:0008150 P biological_process
GO:0030023 F extracellular matrix constituent conferring elasticity
GO:0031012 C extracellular matrix
GO:0032992 C protein-carbohydrate complex
GO:0040003 P chitin-based cuticle development
GO:0042302 F structural constituent of cuticle
4099 O_BomoEE13690_complete:A_BomoEE_comp67208_c0_seq1
245bp
4100 O_BomoEE13691_complete:A_BomoEE_comp67208_c0_seq1
145bp
4101 O_BomoEE13692_complete:A_BomoEE_comp67208_c0_seq1
137bp
4102 O_BomoEE13693_5prime_partial:A_BomoEE_comp67208_c0_seq1
127bp
4103 O_BomoEE13694_complete:A_BomoEE_comp67208_c0_seq1
117bp
4104 O_BomoEE13695_complete:A_BomoEE_comp67210_c0_seq1
285bp
 PREDICTED:_S-adenosylmethionine_mitochondrial_carrier_protein_homolog_[Plutella_xylostella]
GO:0000095 F S-adenosyl-L-methionine transmembrane transporter activity
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0006810 P transport
GO:0015805 P S-adenosyl-L-methionine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:1901962 P S-adenosyl-L-methionine transmembrane transport
4105 O_BomoEE13696_complete:A_BomoEE_comp67210_c0_seq3
219bp
 PREDICTED:_S-adenosylmethionine_mitochondrial_carrier_protein-like_[Amyelois_transitella]
GO:0000095 F S-adenosyl-L-methionine transmembrane transporter activity
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0006810 P transport
GO:0015805 P S-adenosyl-L-methionine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:1901962 P S-adenosyl-L-methionine transmembrane transport
4106 O_BomoEE13697_complete:A_BomoEE_comp67210_c0_seq4
144bp
 PREDICTED:_S-adenosylmethionine_mitochondrial_carrier_protein_homolog_[Plutella_xylostella]
GO:0000095 F S-adenosyl-L-methionine transmembrane transporter activity
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0006810 P transport
GO:0015805 P S-adenosyl-L-methionine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:1901962 P S-adenosyl-L-methionine transmembrane transport
4107 O_BomoEE13698_3prime_partial:A_BomoEE_comp67212_c1_seq1
249bp
 PREDICTED:_uncharacterized_protein_LOC105842157_[Bombyx_mori]
GO:0000070 P mitotic sister chromatid segregation
GO:0001047 F core promoter sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006342 P heterochromatin assembly
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0016458 P obsolete gene silencing
GO:0021954 P central nervous system neuron development
GO:0030708 P germarium-derived female germ-line cyst encapsulation
GO:0030713 P ovarian follicle cell stalk formation
GO:0035075 P response to ecdysone
GO:0035102 C PRC1 complex
GO:0035186 P syncytial blastoderm mitotic cell cycle
GO:0044547 F DNA topoisomerase binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051087 F chaperone binding
4108 O_BomoEE13699_complete:A_BomoEE_comp67214_c0_seq1
913bp
 putative_Erbb2_interacting_protein_isoform_2_[Operophtera_brumata]
GO:0003674 F molecular_function
GO:0005912 C adherens junction
GO:0007163 P establishment or maintenance of cell polarity
GO:0015031 P protein transport
4109 O_BomoEE1369_complete:A_BomoEE_comp29827_c0_seq1
104bp
4110 O_BomoEE136_internal:A_BomoEE_comp2435_c1_seq1
111bp
 reverse_transcriptase_[Bombyx_mori]
previous next from show/95730

- SilkBase 1999-2023 -